RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 TUBB1Q9H4B7 451 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 PPP4R1LQ9P1A2 415 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 RASD1Q9Y272 281 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 C4AP0C0L4 1744 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 C4BP0C0L5 1744 aa12.95□□□□□ -0.34
RTN4-202ENST00000337526 HPGDSO60760 199 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 PRAMEF2O60811 474 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 RAD51DO75771 328 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 ZNF888P0CJ79 500 aaPredicted RBP12.94□□□□□ -0.34
RTN4-202ENST00000337526 BMP4P12644 408 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 PCGF3Q3KNV8 242 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 ZC3H14Q6PJT7 736 aaKnown RBP12.94□□□□□ -0.34
RTN4-202ENST00000337526 LMNTD1Q8N9Z9 388 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 SHDQ96IW2 340 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 NECAB3Q96P71 396 aaPredicted RBP12.94□□□□□ -0.34
RTN4-202ENST00000337526 PITX2Q99697 317 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 HOXD1Q9GZZ0 328 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 MEPEQ9NQ76 525 aaPredicted RBP12.94□□□□□ -0.34
RTN4-202ENST00000337526 CHD4Q14839 1912 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 CACNA1CQ13936 2221 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 NPIPA5A0A0B4J1W7 369 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 LOC102723532A0A0G2JNH3 316 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 VSTM2BA6NLU5 285 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 NPIPA2E9PIF3 369 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 NPIPA7E9PJI5 369 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 NPIPA3F8WFD2 350 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 TFP02787 698 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 NPIPA8P0DM63 369 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 ZNF16P17020 682 aaPredicted RBP12.94□□□□□ -0.34
RTN4-202ENST00000337526 HOXC13P31276 330 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 TUBB3Q13509 450 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 CDK10Q15131 360 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 CARD17Q5XLA6 110 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 CYP4V2Q6ZWL3 525 aaPredicted RBP12.94□□□□□ -0.34
RTN4-202ENST00000337526 WDR53Q7Z5U6 358 aaPredicted RBP12.94□□□□□ -0.34
RTN4-202ENST00000337526 SDR9C7Q8NEX9 313 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 MYLIPQ8WY64 445 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 C1QTNF2Q9BXJ5 285 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 OR51J1Q9H342 316 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 IL23AQ9NPF7 189 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 PEX12O00623 359 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 SLC22A5O76082 557 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 KCNK5O95279 499 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 KLKB1P03952 638 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 GYPBP06028 91 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 FBLP22087 321 aaKnown RBP12.94□□□□□ -0.34
RTN4-202ENST00000337526 RGS19P49795 217 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 CAPZA1P52907 286 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 KCNJ8Q15842 424 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 SSX6Q7RTT6 188 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 SERPINA12Q8IW75 414 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 ZNF619Q8N2I2 560 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 OR4F15Q8NGB8 312 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 TMEM163Q8TC26 289 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 GPR78Q96P69 363 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 ALOXE3Q9BYJ1 711 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 HHLA1C9JL84 531 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 ARHGAP33O14559 1287 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 SC5DO75845 299 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 GASTP01350 101 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 ARNTP27540 789 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 PBX2P40425 430 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 SLC7A9P82251 487 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 GBX1Q14549 363 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 TATDN3Q17R31 274 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 SLC35F2Q8IXU6 374 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 GPR148Q8TDV2 347 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 HRASLS5Q96KN8 279 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 OR1F2PQ96R84 312 aa12.94□□□□□ -0.34
RTN4-202ENST00000337526 PITHD1Q9GZP4 211 aaPredicted RBP12.94□□□□□ -0.34
RTN4-202ENST00000337526 PLATP00750 562 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 GNRHRP30968 328 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 SGSHP51688 502 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 MGAT3Q09327 533 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 GNMTQ14749 295 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 GPR19Q15760 415 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 ELP2Q6IA86 826 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 TMEM207Q6UWW9 146 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 L3MBTL4Q8NA19 623 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 ZDHHC1Q8WTX9 485 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 CDS1Q92903 461 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 ACSS1Q9NUB1 689 aaPredicted RBP12.93□□□□□ -0.34
RTN4-202ENST00000337526 PSORS1C1Q9UIG5 152 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 KLK4Q9Y5K2 254 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 NUBP2Q9Y5Y2 271 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 DCDC2BA2VCK2 349 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 MTHFD2P13995 350 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 LSSP48449 732 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 ZNF84P51523 738 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 TRA2BP62995 288 aaKnown RBP12.93□□□□□ -0.34
RTN4-202ENST00000337526 CDK3Q00526 305 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 PRDX1Q06830 199 aaKnown RBP12.93□□□□□ -0.34
RTN4-202ENST00000337526 ELOAQ14241 798 aaKnown RBP12.93□□□□□ -0.34
RTN4-202ENST00000337526 WDR45BQ5MNZ6 344 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 RFLNAQ6ZTI6 216 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 OR52E1Q8NGJ3 308 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 MFSD8Q8NHS3 518 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 ADAMTS18Q8TE60 1221 aa12.93□□□□□ -0.34
RTN4-202ENST00000337526 SNAPC3Q92966 411 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms