RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 EMP2P54851 167 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 NUP107P57740 925 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 HOXC5Q00444 222 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 CD47Q08722 323 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 TARDBPQ13148 414 aaKnown RBP eCLIP14.52□□□□□ -0.092e-7■■■□□ 14.9
HERPUD1-201ENST00000300302 PGBD2Q6P3X8 592 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 KLHL17Q6TDP4 642 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 RRM2BQ7LG56 351 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 APLFQ8IW19 511 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 CMIPQ8IY22 773 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 OR4K5Q8NGD3 323 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 SLC35B4Q969S0 331 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 SLC41A3Q96GZ6 507 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 LRFN5Q96NI6 719 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 GAL3ST4Q96RP7 486 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 CDC6Q99741 560 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 PRR14Q9BWN1 585 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 SEMA4GQ9NTN9 838 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 SLC39A1Q9NY26 324 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 GPN3Q9UHW5 284 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 NXT1Q9UKK6 140 aaKnown RBP14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 BLOC1S6Q9UL45 172 aa14.52□□□□□ -0.09
HERPUD1-201ENST00000300302 NPIPB9F8W1W9 429 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 IL33O95760 270 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 ELK4P28324 431 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 EPHA2P29317 976 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 PSPHP78330 225 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 TOP3AQ13472 1001 aaPredicted RBP14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 APOFQ13790 326 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 FGFBP1Q14512 234 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 EBPQ15125 230 aaKnown RBP14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 C6orf141Q5SZD1 244 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 ANKRD37Q7Z713 158 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 ZNF527Q8NB42 609 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 ADIPOR1Q96A54 375 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 ULBP3Q9BZM4 244 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 NXF5Q9H1B4 397 aaKnown RBP14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 ADNPQ9H2P0 1102 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 WDR54Q9H977 334 aa14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 TUBA8Q9NY65 449 aaPredicted RBP14.51□□□□□ -0.09
HERPUD1-201ENST00000300302 A0A087WXM4 84 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 TRAPPC13A5PLN9 417 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 TRIM64A6NGJ6 449 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 E9PQ18 207 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 CBFA2T3O75081 653 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 GKN3PP0CG01 181 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 SLC5A2P31639 672 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 GGT2P36268 569 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 RPL5P46777 297 aaKnown RBP14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 TUBA4AP68366 448 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 COX10Q12887 443 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 MEP1AQ16819 746 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 ZNF730Q6ZMV8 503 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 GDF7Q7Z4P5 450 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 C9orf40Q8IXQ3 194 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 ZSCAN1Q8NBB4 408 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 FBLIM1Q8WUP2 373 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 ZNF559Q9BR84 538 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 CRB3Q9BUF7 120 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 UBQLN4Q9NRR5 601 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 C19orf25Q9UFG5 118 aaPredicted RBP14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 SPEGQ15772 3267 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 A0A087WUU8 490 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 SAGE2PA6NJ88 616 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 GDF9O60383 454 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 RFPL3O75679 317 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 OSMP13725 252 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 HPGDP15428 266 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 GSTM3P21266 225 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 LCN1P31025 176 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 KRT20P35900 424 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 RAB15P59190 212 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 CTU2Q2VPK5 515 aaKnown RBP14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 CCDC157Q569K6 752 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 MRPL14Q6P1L8 145 aaKnown RBP14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 C1orf94Q6P1W5 598 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 ZNF550Q7Z398 422 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 C17orf47Q8NEP4 570 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 B3GNT7Q8NFL0 401 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 ACOT11Q8WXI4 607 aaPredicted RBP14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 EFHD2Q96C19 240 aaPredicted RBP14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 SPSB2Q99619 263 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 WWTR1Q9GZV5 400 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 PARD6AQ9NPB6 346 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 KRCC1Q9NPI7 259 aaPredicted RBP14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 SLC7A7Q9UM01 511 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 ZNF318Q5VUA4 2279 aa14.5□□□□□ -0.09
HERPUD1-201ENST00000300302 C9J4A7 227 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 TO15178 435 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 LINGO3P0C6S8 592 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 PRG2P13727 222 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 ZNF28P17035 718 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 CRISP1P54107 249 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 NR1H2P55055 460 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 CDK5R2Q13319 367 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 OR1Q1Q15612 314 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 DCAF12Q5T6F0 453 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 CD300LDQ6UXZ3 194 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 DEPDC4Q8N2C3 294 aa14.49□□□□□ -0.09
HERPUD1-201ENST00000300302 OR4C3Q8NH37 302 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms