RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ARHGAP12Q8IWW6 846 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SLC2A12Q8TD20 617 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SLAMF9Q96A28 289 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 C4orf36Q96KX1 117 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SUCNR1Q9BXA5 334 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF696Q9H7X3 374 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CD207Q9UJ71 328 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 KNDC1Q76NI1 1749 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 XRN1Q8IZH2 1706 aaKnown RBP12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RAB6AP20340 208 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 BMPR1AP36894 532 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SELENOWP63302 87 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 POU4F3Q15319 338 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF674Q2M3X9 581 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SPRED3Q2MJR0 410 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SFXN2Q96NB2 322 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RDH14Q9HBH5 336 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 THSD1Q9NS62 852 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DEFB103AP81534 67 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF440Q8IYI8 595 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CNEP1R1Q8N9A8 125 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR1S1Q8NH92 325 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SAMD11Q96NU1 681 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SLC29A1Q99808 456 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TRBV11-1A0A0K0K1C0 115 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GABRR3A8MPY1 467 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RETP07949 1114 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HNRNPA2B1P22626 353 aaKnown RBP12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FGL1Q08830 312 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GAB1Q13480 694 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CDKN3Q16667 212 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 NADSYN1Q6IA69 706 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DESI1Q6ICB0 168 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PIANPQ8IYJ0 282 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SLC7A5P1Q8MH63 180 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR7G3Q8NG95 312 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PHB2Q99623 299 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ENPP4Q9Y6X5 453 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF28P17035 718 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GDF1P27539 372 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FOLR3P41439 243 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CXCR4P61073 352 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZP2Q05996 745 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 EMC10Q5UCC4 262 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GTPBP8Q8N3Z3 284 aaPredicted RBP12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FRZBQ92765 325 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SPTSSAQ969W0 71 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PELI2Q9HAT8 420 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SERTAD4Q9NUC0 356 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SPEF2Q9C093 1822 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR6C6A6NF89 314 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ARPC1BO15143 372 aaKnown RBP12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LYRM1O43325 122 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 UBL4AP11441 157 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GPR50Q13585 617 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HNF4GQ14541 408 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 C3orf30Q96M34 536 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LPAR4Q99677 370 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MICU1Q9BPX6 476 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ACPTQ9BZG2 426 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GCM1Q9NP62 436 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 KDM4EB2RXH2 506 aaPredicted RBP12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 F5H5P2 479 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 F8W036 122 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 H3BMQ9 156 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DENRO43583 198 aaKnown RBP12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CA5AP35218 305 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DLSTP36957 453 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 NKX3-2P78367 333 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CHRNEQ04844 493 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MGAT3Q09327 533 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FGFBP1Q14512 234 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ABHD17BQ5VST6 288 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PLCXD3Q63HM9 321 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 VHLLQ6RSH7 139 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PRSS48Q7RTY5 328 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PDZD9Q8IXQ8 264 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 METTL25Q8N6Q8 603 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR56B2PQ8NGI1 322 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TMEM239Q8WW34 195 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 COG8Q96MW5 612 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FKRPQ9H9S5 495 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ABRACLQ9P1F3 81 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PCDHA9Q9Y5H5 950 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PHYHO14832 338 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 JRKO75564 520 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SLC22A5O76082 557 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 EDN1P05305 212 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 AHRP35869 848 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MAGEA6P43360 314 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SPOCK1Q08629 439 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 NRG4Q8WWG1 115 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HHIPL1Q96JK4 782 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MED20Q9H944 212 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ACKR4Q9NPB9 350 aa12.78□□□□□ -0.36
CHRFAM7A-201ENST00000299847 USP22Q9UPT9 525 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms