RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 SLC16A11Q8NCK7 471 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 RCBTB1Q8NDN9 531 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 CASTOR1Q8WTX7 329 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 C4orf36Q96KX1 117 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 FUZQ9BT04 418 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 FGF22Q9HCT0 170 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 MAFFQ9ULX9 164 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 NEU3Q9UQ49 428 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 BOLA1Q9Y3E2 137 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 WDR87Q6ZQQ6 2873 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 SDK2Q58EX2 2172 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 IGHV3-20A0A0C4DH32 117 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 C13orf42A0A1B0GVH6 325 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 HTR3EA5X5Y0 456 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 C17orf105B2RV13 164 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 H7C0S8 307 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 ZDHHC11BP0C7U3 371 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 GP1BBP13224 206 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 CD22P20273 847 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 XCR1P46094 333 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 RPS5P46782 204 aaKnown RBP4.49□□□□□ -1.69
UBR1-201ENST00000290650 CTXN1P60606 82 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 PPP2CBP62714 309 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 PPP2CAP67775 309 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 HSF2Q03933 536 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 ADPRMQ3LIE5 342 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 DCST2Q5T1A1 773 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 KCTD9Q7L273 389 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 SPRED1Q7Z699 444 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 TMEM150AQ86TG1 271 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 TMEM156Q8N614 296 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 AVL9Q8NBF6 648 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 GALNT11Q8NCW6 608 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 ZFPM2Q8WW38 1151 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 CNDP2Q96KP4 475 aaKnown RBP4.49□□□□□ -1.69
UBR1-201ENST00000290650 FRMD6Q96NE9 622 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 MYADMQ96S97 322 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 ATP13A2Q9NQ11 1180 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 PARPBPQ9NWS1 579 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 NUFIP1Q9UHK0 495 aaKnown RBP4.49□□□□□ -1.69
UBR1-201ENST00000290650 PATJQ8NI35 1801 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 WDR90Q96KV7 1748 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 MKI67P46013 3256 aaKnown RBP4.49□□□□□ -1.69
UBR1-201ENST00000290650 ARPC4-TTLL3A0A0A6YYG9 625 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 TMPRSS11DO60235 418 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 KDM4BO94953 1096 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 SCGB1D2O95969 90 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 HLA-DPB1P04440 258 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 BMP4P12644 408 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 VAMP1P23763 118 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 FNTBP49356 437 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 CXCR4P61073 352 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 PRDX1Q06830 199 aaKnown RBP4.49□□□□□ -1.69
UBR1-201ENST00000290650 PLCXD2Q0VAA5 305 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 SGCBQ16585 318 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 SPATS1Q496A3 300 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 SLC25A24Q6NUK1 477 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 KDM8Q8N371 416 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 OR2L3Q8NG85 312 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 OR8J1Q8NGP2 316 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 MR1Q95460 341 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 SLC6A18Q96N87 628 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 OR10A4Q9H209 315 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 PDE7BQ9NP56 450 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 MYNNQ9NPC7 610 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 CD93Q9NPY3 652 aa4.49□□□□□ -1.69
UBR1-201ENST00000290650 RLFQ13129 1914 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 LOC102723532A0A0G2JNH3 316 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PCP4L1A6NKN8 68 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PEX12O00623 359 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SEC14L5O43304 696 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 UGT2B7P16662 529 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 FBLP22087 321 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 CD40LGP29965 261 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SLC6A6P31641 620 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 STAT5AP42229 794 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SUOXP51687 545 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 RPS25P62851 125 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 FAPQ12884 760 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 RPA4Q13156 261 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 EIF4HQ15056 248 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 TRMT12Q53H54 448 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 PLAG1Q6DJT9 500 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 FRMPD2BQ6IN97 320 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 CNIH2Q6PI25 160 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 METAP1DQ6UB28 335 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 IQCF2Q8IXL9 164 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR8J2Q8NGG1 315 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 FAM46BQ96A09 425 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ASB16Q96NS5 453 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 CTRCQ99895 268 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TUBA1CQ9BQE3 449 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PLA2G2FQ9BZM2 168 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ATG5Q9H1Y0 275 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 MMP27Q9H306 513 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TMEM184CQ9NVA4 438 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SPATA6Q9NWH7 488 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 SEC14L4Q9UDX3 406 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SERTAD3Q9UJW9 196 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PCDHGB6Q9Y5F9 930 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms