RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 KDM4EB2RXH2 506 aaPredicted RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 IMPA2O14732 288 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 PRKYO43930 277 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 SC5DO75845 299 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ARIH2O95376 493 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 GASTP01350 101 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 MGMTP16455 207 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ADH6P28332 368 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 CEACAM6P40199 344 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 RGS19P49795 217 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 TBX4P57082 545 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 SPIBQ01892 262 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 GAB1Q13480 694 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 INPP5JQ15735 1006 aaPredicted RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ARSIQ5FYB1 569 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 C16orf54Q6UWD8 224 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ETV3LQ6ZN32 361 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 OR2W3Q7Z3T1 314 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 TPRA1Q86W33 373 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 LRIG1Q96JA1 1093 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ZFP3Q96NJ6 502 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 CHST5Q9GZS9 411 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 WDR13Q9H1Z4 485 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF408Q9H9D4 720 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 TBC1D17Q9HA65 648 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 HMX1Q9NP08 348 aaPredicted RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ACKR4Q9NPB9 350 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 GSAPA4D1B5 854 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 DVL2O14641 736 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 LDLRAD4O15165 306 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 SNRPCP09234 159 aaKnown RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 SBK2P0C263 348 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 UBBP0CG47 229 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 UBCP0CG48 685 aaKnown RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 NR2F6P10588 404 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 GJA1P17302 382 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 PSMB1P20618 241 aaKnown RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 AQP1P29972 269 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ADRA1AP35348 466 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 CD86P42081 329 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 OR1E2P47887 323 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 CCR9P51686 369 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 RPS27AP62979 156 aaKnown RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 UBA52P62987 128 aaKnown RBP8.64□□□□□ -1.03
PDGFC-201ENST00000274071 TGIF1Q15583 401 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM201Q5SNT2 666 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 SPNS3Q6ZMD2 512 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 C7orf31Q8N865 590 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 C1orf127Q8N9H9 656 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 AMDHD1Q96NU7 426 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF382Q96SR6 550 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 MESP1Q9BRJ9 268 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 FUZQ9BT04 418 aa8.64□□□□□ -1.03
PDGFC-201ENST00000274071 TSTD3H0UI37 97 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 GABRPO00591 440 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 ARPC1BO15143 372 aaKnown RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 MT-ND4LP03901 98 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 IGFBP1P08833 259 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 MAPK3P27361 379 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 AVPR2P30518 371 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 RPL3P39023 403 aaKnown RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 ZNF140P52738 457 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 HMGCS1Q01581 520 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 SEMG2Q02383 582 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 ITKQ08881 620 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 NAE1Q13564 534 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 KLF9Q13886 244 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 SF1Q15637 639 aaKnown RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CLEC2AQ6UVW9 174 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 TMPRSS11FQ6ZWK6 438 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 PRSS35Q8N3Z0 413 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 AQP11Q8NBQ7 271 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 GPRC5AQ8NFJ5 357 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 OR51Q1Q8NH59 317 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CASD1Q96PB1 797 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 DOHHQ9BU89 302 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 TMEM231Q9H6L2 316 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 SIRT7Q9NRC8 400 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 ASF1BQ9NVP2 202 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 STOX2Q9P2F5 926 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 DNAJC25-GNG10A0A024R161 153 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CD8B2A6NJW9 211 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 A8MVJ9 347 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 J3KTA2 159 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CLIC1O00299 241 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 RFXANKO14593 260 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 BCAT2O15382 392 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-201ENST00000274071 RAB36O95755 333 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 IFNA2P01563 188 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 C1SP09871 688 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CD8BP10966 210 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 EPXP11678 715 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 PAX1P15863 534 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 RPA2P15927 270 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 SOX18P35713 384 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CXCR3P49682 368 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 SULT1E1P49888 294 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CXADRP78310 365 aa8.63□□□□□ -1.03
PDGFC-201ENST00000274071 CAPSQ13938 189 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms