RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 CCL4P13236 92 aa18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NUP107P57740 925 aa18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 HOXC5Q00444 222 aa18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 TOP3AQ13472 1001 aaPredicted RBP18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 EIPR1Q53HC9 387 aa18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DCST1Q5T197 706 aa18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MRPL2Q5T653 305 aaKnown RBP18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SUMF1Q8NBK3 374 aa18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 FNDC11Q9BVV2 318 aa18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 AASSQ9UDR5 926 aa18.21■□□□□ 0.5
TNFRSF1A-201ENST00000162749 A0A1W2PPW3 197 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CDHR4A6H8M9 788 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 GUSBP08236 651 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CBLP22681 906 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 IL5RAQ01344 420 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NPRL3Q12980 569 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 AQP11Q8NBQ7 271 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 OR14A16Q8NHC5 309 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DAZLQ92904 295 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SLC46A1Q96NT5 459 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 GABARAPL3Q9BY60 117 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 BLOC1S6Q9UL45 172 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 TMCC3Q9ULS5 477 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CBLCQ9ULV8 474 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 OR10H1Q9Y4A9 318 aa18.2■□□□□ 0.5
TNFRSF1A-201ENST00000162749 TTC36A6NLP5 189 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 XPNPEP2O43895 674 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PRKNO60260 465 aaPredicted RBP18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 POU2F1P14859 743 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 RNF144AP50876 292 aaPredicted RBP18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SMIM11AP58511 58 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 KEAP1Q14145 624 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 OVCH1Q7RTY7 1134 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NAXDQ8IW45 347 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 BPIFB6Q8NFQ5 453 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ZNF566Q969W8 418 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 FKBP10Q96AY3 582 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 C14orf105Q9NVL8 296 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ZNF292O60281 2723 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 IDSB3KWA1 339 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PTGES3LE9PB15 166 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MEN1O00255 615 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CPNE3O75131 537 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 GASTP01350 101 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ZNF28P17035 718 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NUBP1P53384 320 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 TAS2R41P59536 307 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PLAURQ03405 335 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 TUBA3CQ13748 450 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 FAAH2Q6GMR7 532 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 BCORP1Q8N888 145 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DIO2Q92813 273 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 EDEM2Q9BV94 578 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 POFUT2Q9Y2G5 429 aa18.19■□□□□ 0.5
TNFRSF1A-201ENST00000162749 DMXL1Q9Y485 3027 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MUC6Q6W4X9 2439 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CPSF4LA6NMK7 179 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 FAAHO00519 579 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CBFA2T3O75081 653 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CCDC159P0C7I6 412 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PCMT1P22061 227 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ZNF136P52737 540 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ENTPD8Q5MY95 495 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PDZK1Q5T2W1 519 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 LCN10Q6JVE6 187 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PMEPA1Q969W9 287 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 GTPBP3Q969Y2 492 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 LMF1Q96S06 567 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 G6PC3Q9BUM1 346 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NUDT9Q9BW91 350 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 AKIRIN1Q9H9L7 192 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 FBXO8Q9NRD0 319 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NDRG4Q9ULP0 352 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CFL2Q9Y281 166 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NTNG1Q9Y2I2 539 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SH3PXD2BA1X283 911 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 VSTM2BA6NLU5 285 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 E9PQ18 207 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 OR10H3O60404 316 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CNOT3O75175 753 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 BCAS1O75363 584 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 OXSR1O95747 527 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CCNYL3P0C7X3 344 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 CCKBRP32239 447 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PPICP45877 212 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 TMBIM6P55061 237 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MC2RQ01718 297 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ART5Q96L15 291 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 MESP1Q9BRJ9 268 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NXF5Q9H1B4 397 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ZNF556Q9HAH1 456 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PCDHGA10Q9Y5H3 936 aa18.18■□□□□ 0.5
TNFRSF1A-201ENST00000162749 AHCTF1Q8WYP5 2266 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SYNDIG1LA6NDD5 238 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 PRR33A8MZF0 331 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 NPIPB9F8W1W9 429 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 AP3D1O14617 1153 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 ANGPTL1O95841 491 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 FMO3P31513 532 aa18.17■□□□□ 0.5
TNFRSF1A-201ENST00000162749 SPEM2Q0P670 501 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms