RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Mfsd11Q8BJ51 449 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Q8C0X8 640 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Tmem125Q8CHQ6 216 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 MepceQ8K3A9 666 aaKnown RBP19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Cd177Q8R2S8 817 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Olfr1467Q8VFW1 308 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Olfr691Q8VGW5 322 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Olfr643Q8VGY1 314 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Satb2Q8VI24 733 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Nprl3Q8VIJ8 569 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 MvdQ99JF5 401 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Phf6Q9D4J7 364 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Ndufa13Q9ERS2 144 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Ptdss2Q9Z1X2 473 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Mocs2Q9Z223 189 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Igkv12-38A0A0G2JEI7 115 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Cela3aA2A9U8 283 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Itga10E9Q6R1 1167 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Psmc3ipO35047 217 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Psme2P97372 239 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Gm5346Q7M766 736 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 IfneQ80ZF2 192 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Tmprss7Q8BIK6 829 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Kcns3Q8BQZ8 491 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Ptpn7Q8BUM3 359 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Q8K207 121 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Gin1Q8K259 518 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Casc3Q8K3W3 698 aaKnown RBP19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Dhrs4Q99LB2 279 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Ankrd10Q99LW0 415 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Rhox9Q9EQM5 227 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Sema6cQ9WTM3 931 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Minpp1Q9Z2L6 481 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Plxnb1Q8CJH3 2119 aa19.69■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Olfr1032A2ATE5 310 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Gm8267E9Q207 261 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Inpp5aE9QAS7 422 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Prph2P15499 346 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Pcsk4P29121 655 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Mmp2P33434 662 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Rab17P35292 214 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Rpl5P47962 297 aaKnown RBP19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 FuzQ3UYI6 415 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Sez6l2Q4V9Z5 910 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Klri2Q5DT36 248 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Cd55Q61475 390 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Ugt2a2Q6PDD0 528 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Ffar1Q76JU9 300 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Pum1Q80U78 1189 aaKnown RBP19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 JamlQ80UL9 379 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Cpeb2Q812E0 521 aaKnown RBP19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 MkxQ8BIA3 353 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 OacylQ8BML2 685 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 NarsQ8BP47 559 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Nuak2Q8BZN4 639 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 EloaQ8CB77 773 aaKnown RBP19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Vmn1r81Q8R286 306 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Vmn1r24Q8R2D6 296 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Olfr781Q8VFZ8 311 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Mospd2Q9CWP6 518 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Slc25a18Q9DB41 320 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Gm7682A0A0J9YUM1 481 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Slfn9B1ARD6 910 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Vmn2r98E9PZ56 857 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 A430033K04RikE9Q8G5 680 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Gm2056J3QQ02 144 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Cx3cl1O35188 395 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Man2a1P27046 1150 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Nkx2-2P42586 273 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Csrp1P97315 193 aaKnown RBP19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Nr1h2Q60644 446 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Zar1Q80SU3 361 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Ubash3bQ8BGG7 638 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Pou6f2Q8BJI4 691 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Phf21bQ8C966 487 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Upp2Q8CGR7 320 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Aoc1Q8JZQ5 751 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Lin28aQ8K3Y3 209 aaKnown RBP19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Znf768Q8R0T2 568 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 PrkxQ922R0 355 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Ifi44lQ9BDB7 447 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 PglsQ9CQ60 257 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Msantd3Q9CR78 275 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Lrrc51Q9DAK8 192 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Mid2Q9QUS6 705 aa19.68■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Pde4dipQ80YT7 2224 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Tbc1d25A1A5B6 742 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Gm8159E9Q0R1 267 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Gm20696H3BJN7 74 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Apoa2P09813 102 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Atp1b1P14094 304 aaKnown RBP19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Foxa1P35582 468 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Mfsd12Q3U481 476 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 WhammQ571B6 793 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Znf516Q7TSH3 1157 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Vac14Q80WQ2 782 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Itih5Q8BJD1 952 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 P2ry10bQ8BY68 352 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Lpcat2Q8BYI6 544 aa19.67■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Vmn1r189Q8K3N3 312 aa19.67■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms