RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Mat2aQ3THS6 395 aaKnown RBP9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Adh7Q64437 374 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 TipinQ91WA1 278 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Ms4a10Q99N03 267 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Pinx1Q9CZX5 332 aaKnown RBP9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Ap1s2Q9DB50 160 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Tsc22d4Q9EQN3 387 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Vmn2r75G5E8Z7 853 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Klhl8P59280 629 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Cfap97Q6ZPR1 541 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 CrygnQ8VHL5 183 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Cdhr1Q8VHP6 859 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Prdm9Q96EQ9 843 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Klhl15A2AAX3 604 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Hacd4A2AKM2 232 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Olfr550E9Q544 316 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Gm37240E9QAY5 252 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Vmn2r92L7N2A4 860 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 TstP52196 297 aaKnown RBP9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Rpl10lP86048 214 aaKnown RBP9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Rps5P97461 204 aaKnown RBP9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Dusp2Q05922 318 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Olfr1136Q0VBI4 310 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Tstd2Q3U269 495 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Cldn34b3Q80ZS5 209 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Ssuh2Q8C3L1 340 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Q8C5S3 137 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Il23rQ8K4B4 644 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Oas1hQ8VI97 369 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Ugt2b38Q91WH2 530 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Q9D112 206 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Aldoart2A6ZI47 364 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 NelfeP19426 375 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Lhx3P50481 400 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Cacng6Q8VHW3 260 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Srd5a3Q9WUP4 330 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Gm3727J3QM54 205 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Ebf1Q07802 591 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Plk5Q4FZD7 595 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Prrt3Q6PE13 971 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 N6amt1Q6SKR2 214 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 H2-M10.2Q85ZW9 329 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 GnsQ8BFR4 544 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Tmem127Q8BGP5 238 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Mal2Q8BI08 175 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Cdca5Q9CPY3 264 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Tas2r119Q9JKT2 335 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Clec4eQ9R0Q8 214 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Macc1E9PXX8 851 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Olfr613E9PYB4 317 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Olfr730E9Q8M3 318 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Znf683I7HJS4 458 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Gm3685J3QPP2 205 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Htr2aP35363 471 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 TCAIMQ66JZ4 499 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Shc4Q6S5L9 626 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Sox11Q7M6Y2 395 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Olfr1475Q8VEV6 314 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Abcg5Q99PE8 652 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Gm8797A0A0A6YW67 77 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Csn1s2bP02664 143 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Hoxa9P09631 271 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 UbbP0CG49 305 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 UbcP0CG50 734 aaKnown RBP9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Clk1P22518 483 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Irf2P23906 349 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Bdkrb2P32299 392 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Gdf5P43027 495 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Nup43P59235 380 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Rps27aP62983 156 aaKnown RBP9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Uba52P62984 128 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Olfr331Q5NC44 324 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 ManbaQ8K2I4 879 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Tomm20Q9DCC8 145 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Fer1l6E0CZ42 1862 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Cd300ld2A2A7W0 305 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Gm13178B1AVU7 408 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Cd38P56528 304 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Ccdc190Q3URK1 288 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Olfr270Q7TS19 314 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Acat3Q80X81 397 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Slc7a6Q8BGK6 515 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Zfp3Q8BLB0 497 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 4930578G10RikQ9D4Q4 153 aa9.92□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Man2b2O54782 1018 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Bpifa1P97361 278 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Mansc4Q3UU94 337 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Vmn1r69Q8VIC1 319 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Mrgpra5Q91ZC7 304 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 SnapinQ9Z266 136 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Syn1O88935 706 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Mtnd1P03888 318 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Il12aP43431 215 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 CluQ06890 448 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Sema4cQ64151 834 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Hfe2Q7TQ32 420 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Vmn2r81Q80Z09 865 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 NifkQ91VE6 317 aaKnown RBP9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Ccdc86Q9JJ89 426 aa9.91□□□□□ -0.82
Scn8a-201ENSMUST00000082209 Srebf1Q9WTN3 1134 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms