RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	GUP2	Q08929	609 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	GNT1	Q12096	491 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	XRN1	P22147	1528 aa	Known RBP	5.7	□□□□□ -1.5
UBP7	YIL156W	ENA1	P13587	1091 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	SIS1	P25294	352 aa	Known RBP	5.7	□□□□□ -1.5
UBP7	YIL156W	AFG2	P32794	780 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	NEM1	P38757	446 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	SGM1	P47166	707 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	HOL1	P53389	586 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	ENA2	Q01896	1091 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	SKY1	Q03656	742 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	SPO21	Q12411	609 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	TY1A-DR3	Q12441	440 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	ENA5	Q12691	1091 aa		5.7	□□□□□ -1.5
UBP7	YIL156W	YKU70	P32807	602 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	PEX5	P35056	612 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	YKL050C	P35736	922 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	AHP1	P38013	176 aa	Known RBP	5.69	□□□□□ -1.5
UBP7	YIL156W	TOK1	P40310	691 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	EIS1	Q05050	843 aa	Known RBP	5.69	□□□□□ -1.5
UBP7	YIL156W	SPN1	Q06505	410 aa	Predicted RBP	5.69	□□□□□ -1.5
UBP7	YIL156W	HIM1	Q06674	414 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	IRC3	Q06683	689 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	SSM4	P40318	1319 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	DOP1	Q03921	1698 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	ADE8	P04161	214 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	SAN1	P22470	610 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	CNM67	P53865	581 aa	Known RBP	5.69	□□□□□ -1.5
UBP7	YIL156W	BLS1	Q06071	122 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	VMA8	P32610	256 aa	Known RBP	5.69	□□□□□ -1.5
UBP7	YIL156W	ECM32	P32644	1121 aa	Known RBP	5.69	□□□□□ -1.5
UBP7	YIL156W	AFR1	P33304	620 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	SER1	P33330	395 aa	Known RBP	5.69	□□□□□ -1.5
UBP7	YIL156W	BCD1	P38772	366 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	CEG1	Q01159	459 aa	Predicted RBP	5.69	□□□□□ -1.5
UBP7	YIL156W	ERO1	Q03103	563 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	ATP25	Q03153	612 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	GYP1	Q08484	637 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	YPR027C	Q12079	277 aa		5.69	□□□□□ -1.5
UBP7	YIL156W	SPO14	P36126	1683 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	ALG3	P38179	458 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	SLS1	P42900	643 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	SPP382	Q06411	708 aa	Predicted RBP	5.68	□□□□□ -1.5
UBP7	YIL156W	YRF1-1	P0CX20	1796 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	YRF1-5	P0CX21	1796 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	YRF1-8	P0CX22	1796 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	HTS1	P07263	546 aa	Known RBP	5.68	□□□□□ -1.5
UBP7	YIL156W	RGD1	P38339	666 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	RCF1	Q03713	159 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	PSR1	Q07800	427 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	MET7	Q08645	548 aa		5.68	□□□□□ -1.5
UBP7	YIL156W	HSP82	P02829	709 aa	Known RBP	5.67	□□□□□ -1.5
UBP7	YIL156W	RPS21A	P0C0V8	87 aa	Known RBP	5.67	□□□□□ -1.5
UBP7	YIL156W	GFA1	P14742	717 aa	Known RBP	5.67	□□□□□ -1.5
UBP7	YIL156W	SLA1	P32790	1244 aa		5.67	□□□□□ -1.5
UBP7	YIL156W	RET2	P43621	546 aa		5.67	□□□□□ -1.5
UBP7	YIL156W	MOT3	P54785	490 aa	Known RBP	5.67	□□□□□ -1.5
UBP7	YIL156W	BI4	P03879	638 aa		5.67	□□□□□ -1.5
UBP7	YIL156W	RGP1	P16664	663 aa		5.67	□□□□□ -1.5
UBP7	YIL156W	ABZ1	P37254	787 aa	Predicted RBP	5.67	□□□□□ -1.5
UBP7	YIL156W	TDA3	P38758	523 aa		5.67	□□□□□ -1.5
UBP7	YIL156W	PES4	P39684	611 aa		5.67	□□□□□ -1.5
UBP7	YIL156W	IMH1	Q06704	911 aa	Known RBP	5.67	□□□□□ -1.5
UBP7	YIL156W	NHA1	Q99271	985 aa		5.67	□□□□□ -1.5
UBP7	YIL156W	PER1	P25625	357 aa		5.67	□□□□□ -1.5
UBP7	YIL156W	VPH1	P32563	840 aa	Known RBP	5.67	□□□□□ -1.5
UBP7	YIL156W	TAD1	P53065	400 aa		5.67	□□□□□ -1.5
UBP7	YIL156W	MRP7	P12687	371 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	PET309	P32522	965 aa	Predicted RBP	5.66	□□□□□ -1.5
UBP7	YIL156W	REC104	P33323	182 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	YER156C	P40093	338 aa	Known RBP	5.66	□□□□□ -1.5
UBP7	YIL156W	RKM2	Q03942	479 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	RSC58	Q07979	502 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	ENT1	Q12518	454 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	CYB2	P00175	591 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	IDI1	P15496	288 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	MSH1	P25846	959 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	ANP1	P32629	500 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	EMC3	P36039	253 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	MUD2	P36084	527 aa	Known RBP	5.66	□□□□□ -1.5
UBP7	YIL156W	NOP4	P37838	685 aa	Known RBP	5.66	□□□□□ -1.5
UBP7	YIL156W	HXT6	P39003	570 aa	Known RBP	5.66	□□□□□ -1.5
UBP7	YIL156W	HXT7	P39004	570 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	UTP22	P53254	1237 aa	Predicted RBP	5.66	□□□□□ -1.5
UBP7	YIL156W	DAM1	P53267	343 aa		5.66	□□□□□ -1.5
UBP7	YIL156W	PNT1	P38969	423 aa		5.65	□□□□□ -1.5
UBP7	YIL156W	CCT8	P47079	568 aa	Known RBP	5.65	□□□□□ -1.5
UBP7	YIL156W	YJR124C	P47159	448 aa		5.65	□□□□□ -1.5
UBP7	YIL156W	UPF3	P48412	387 aa	Known RBP	5.65	□□□□□ -1.5
UBP7	YIL156W	TEP1	P53916	434 aa		5.65	□□□□□ -1.5
UBP7	YIL156W	BRE4	Q07660	1125 aa		5.65	□□□□□ -1.5
UBP7	YIL156W	NPP1	P25353	742 aa		5.65	□□□□□ -1.51
UBP7	YIL156W	SMY2	P32909	740 aa	Known RBP	5.65	□□□□□ -1.51
UBP7	YIL156W	PXA2	P34230	853 aa		5.65	□□□□□ -1.51
UBP7	YIL156W	UBS1	P38290	277 aa		5.65	□□□□□ -1.51
UBP7	YIL156W	YGR016W	P53209	190 aa		5.65	□□□□□ -1.51
UBP7	YIL156W	NHX1	Q04121	633 aa		5.65	□□□□□ -1.51
UBP7	YIL156W	AAC3	P18238	307 aa		5.65	□□□□□ -1.51
UBP7	YIL156W	CDC60	P26637	1090 aa	Known RBP	5.65	□□□□□ -1.51
UBP7	YIL156W	MDJ1	P35191	511 aa		5.65	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms