RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL40A	YIL148W	MSD1	P15179	658 aa	Known RBP	3.13	□□□□□ -1.91
RPL40A	YIL148W	CDC48	P25694	835 aa	Known RBP	3.13	□□□□□ -1.91
RPL40A	YIL148W	APL1	P27351	700 aa		3.13	□□□□□ -1.91
RPL40A	YIL148W	CDC12	P32468	407 aa	Known RBP	3.13	□□□□□ -1.91
RPL40A	YIL148W	PEX6	P33760	1030 aa		3.13	□□□□□ -1.91
RPL40A	YIL148W	PET10	P36139	283 aa		3.13	□□□□□ -1.91
RPL40A	YIL148W	YKR078W	P36158	585 aa	Known RBP	3.13	□□□□□ -1.91
RPL40A	YIL148W	MOH1	P38191	138 aa		3.13	□□□□□ -1.91
RPL40A	YIL148W	YER158C	P40095	573 aa		3.13	□□□□□ -1.91
RPL40A	YIL148W	ALG2	P43636	503 aa		3.13	□□□□□ -1.91
RPL40A	YIL148W	YGL081W	P53156	320 aa		3.13	□□□□□ -1.91
RPL40A	YIL148W	DAM1	P53267	343 aa		3.13	□□□□□ -1.91
RPL40A	YIL148W	UGO1	Q03327	502 aa		3.13	□□□□□ -1.91
RPL40A	YIL148W	TOP3	P13099	656 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	MSH2	P25847	964 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	FUN30	P31380	1131 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	RPC82	P32349	654 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	BET3	P36149	193 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	PLB1	P39105	664 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	GDH3	P39708	457 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	HLJ1	P48353	224 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	RTA1	P53047	317 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	SIZ1	Q04195	904 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	YDR514C	Q04408	483 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	HRQ1	Q05549	1077 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	MDM38	Q08179	573 aa		3.12	□□□□□ -1.91
RPL40A	YIL148W	NOP14	Q99207	810 aa	Known RBP	3.12	□□□□□ -1.91
RPL40A	YIL148W	RPS9A	O13516	197 aa	Known RBP	3.11	□□□□□ -1.91
RPL40A	YIL148W	ENA1	P13587	1091 aa		3.11	□□□□□ -1.91
RPL40A	YIL148W	ACE2	P21192	770 aa		3.11	□□□□□ -1.91
RPL40A	YIL148W	OAR1	P35731	278 aa		3.11	□□□□□ -1.91
RPL40A	YIL148W	TOK1	P40310	691 aa		3.11	□□□□□ -1.91
RPL40A	YIL148W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
RPL40A	YIL148W	GYP7	P48365	746 aa		3.11	□□□□□ -1.91
RPL40A	YIL148W	PSP2	P50109	593 aa	Known RBP	3.11	□□□□□ -1.91
RPL40A	YIL148W	ENA2	Q01896	1091 aa		3.11	□□□□□ -1.91
RPL40A	YIL148W	SRT1	Q03175	343 aa		3.11	□□□□□ -1.91
RPL40A	YIL148W	NOP12	Q08208	459 aa	Known RBP	3.11	□□□□□ -1.91
RPL40A	YIL148W	ENA5	Q12691	1091 aa		3.11	□□□□□ -1.91
RPL40A	YIL148W	ADR1	P07248	1323 aa		3.11	□□□□□ -1.91
RPL40A	YIL148W	MPH2	P0CD99	609 aa		3.1	□□□□□ -1.91
RPL40A	YIL148W	TSR4	P25040	408 aa		3.1	□□□□□ -1.91
RPL40A	YIL148W	SAP190	P36123	1033 aa		3.1	□□□□□ -1.91
RPL40A	YIL148W	CRP1	P38845	465 aa	Known RBP	3.1	□□□□□ -1.91
RPL40A	YIL148W	YJR142W	P47173	342 aa		3.1	□□□□□ -1.91
RPL40A	YIL148W	PUS2	P53167	370 aa		3.1	□□□□□ -1.91
RPL40A	YIL148W	ATG13	Q06628	738 aa		3.1	□□□□□ -1.91
RPL40A	YIL148W	NTG2	Q08214	380 aa		3.1	□□□□□ -1.91
RPL40A	YIL148W	RPP2A	P05319	106 aa	Known RBP	3.09	□□□□□ -1.91
RPL40A	YIL148W	VBA3	P25594	458 aa		3.09	□□□□□ -1.91
RPL40A	YIL148W	RPN10	P38886	268 aa	Known RBP	3.09	□□□□□ -1.91
RPL40A	YIL148W	SHR5	P41912	237 aa		3.09	□□□□□ -1.91
RPL40A	YIL148W	NOG2	P53742	486 aa	Known RBP	3.09	□□□□□ -1.91
RPL40A	YIL148W	TFB2	Q02939	513 aa		3.09	□□□□□ -1.91
RPL40A	YIL148W	MSC2	Q03455	724 aa		3.09	□□□□□ -1.91
RPL40A	YIL148W	REH1	Q06709	432 aa		3.09	□□□□□ -1.91
RPL40A	YIL148W	HRR25	P29295	494 aa	Known RBP	3.08	□□□□□ -1.92
RPL40A	YIL148W	SPC29	P33419	253 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	STO1	P34160	861 aa	Known RBP	3.08	□□□□□ -1.92
RPL40A	YIL148W	EMC3	P36039	253 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	YKL151C	P36059	337 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	ECM21	P38167	1117 aa	Known RBP	3.08	□□□□□ -1.92
RPL40A	YIL148W	TSL1	P38427	1098 aa	Known RBP	3.08	□□□□□ -1.92
RPL40A	YIL148W	GIC1	P38785	314 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	DOT6	P40059	670 aa	Known RBP	3.08	□□□□□ -1.92
RPL40A	YIL148W	CEP3	P40969	608 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	PMT3	P47190	753 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	ZDS1	P50111	915 aa	Known RBP	3.08	□□□□□ -1.92
RPL40A	YIL148W	HFM1	P51979	1187 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	UBA2	P52488	636 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	SDA1	P53313	767 aa	Known RBP	3.08	□□□□□ -1.92
RPL40A	YIL148W	MDM12	Q92328	271 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	NUP145	P49687	1317 aa		3.08	□□□□□ -1.92
RPL40A	YIL148W	NOT3	P06102	836 aa	Known RBP	3.07	□□□□□ -1.92
RPL40A	YIL148W	HSF1	P10961	833 aa		3.07	□□□□□ -1.92
RPL40A	YIL148W	RPL8A	P17076	256 aa	Known RBP	3.07	□□□□□ -1.92
RPL40A	YIL148W	NPP1	P25353	742 aa		3.07	□□□□□ -1.92
RPL40A	YIL148W	YBR238C	P38330	731 aa	Known RBP	3.07	□□□□□ -1.92
RPL40A	YIL148W	YAP1801	P38856	637 aa		3.07	□□□□□ -1.92
RPL40A	YIL148W	ZRG8	P40021	1076 aa		3.07	□□□□□ -1.92
RPL40A	YIL148W	RAI1	P53063	387 aa	Known RBP	3.07	□□□□□ -1.92
RPL40A	YIL148W	SFB2	P53953	876 aa		3.07	□□□□□ -1.92
RPL40A	YIL148W	DNM1	P54861	757 aa		3.07	□□□□□ -1.92
RPL40A	YIL148W	TPO1	Q07824	586 aa		3.07	□□□□□ -1.92
RPL40A	YIL148W	AIM39	Q08223	395 aa		3.07	□□□□□ -1.92
RPL40A	YIL148W	MET7	Q08645	548 aa		3.07	□□□□□ -1.92
RPL40A	YIL148W	PRC1	P00729	532 aa		3.06	□□□□□ -1.92
RPL40A	YIL148W	RAD18	P10862	487 aa		3.06	□□□□□ -1.92
RPL40A	YIL148W	PFK1	P16861	987 aa	Known RBP	3.06	□□□□□ -1.92
RPL40A	YIL148W	DAL7	P21826	554 aa		3.06	□□□□□ -1.92
RPL40A	YIL148W	URA1	P28272	314 aa	Predicted RBP	3.06	□□□□□ -1.92
RPL40A	YIL148W	CYS3	P31373	394 aa	Known RBP	3.06	□□□□□ -1.92
RPL40A	YIL148W	SRP101	P32916	621 aa		3.06	□□□□□ -1.92
RPL40A	YIL148W	TYE7	P33122	291 aa	Predicted RBP	3.06	□□□□□ -1.92
RPL40A	YIL148W	ATG19	P35193	415 aa		3.06	□□□□□ -1.92
RPL40A	YIL148W	ERT1	P38140	529 aa		3.06	□□□□□ -1.92
RPL40A	YIL148W	ATF1	P40353	525 aa		3.06	□□□□□ -1.92
RPL40A	YIL148W	MND2	P40577	368 aa		3.06	□□□□□ -1.92
RPL40A	YIL148W	SNM1	P40993	198 aa		3.06	□□□□□ -1.92
RPL40A	YIL148W	ALY2	P47029	1046 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 92.6 ms