RNA–Protein interactions for RNA: YHL009W-B

YHL009W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHL009W-B, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-BYHL009W-B MAL31P38156 614 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B FAA3P39002 694 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B ACA1P39970 489 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B ROK1P45818 564 aaPredicted RBP-0.42□□□□□ -2.48
YHL009W-BYHL009W-B LRS4Q04087 347 aaKnown RBP-0.42□□□□□ -2.48
YHL009W-BYHL009W-B TDA9Q04545 1251 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B SVS1Q12254 260 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B ARO1P08566 1588 aaKnown RBP-0.42□□□□□ -2.48
YHL009W-BYHL009W-B CDC19P00549 500 aaKnown RBP-0.42□□□□□ -2.48
YHL009W-BYHL009W-B RPP2BP02400 110 aaKnown RBP-0.42□□□□□ -2.48
YHL009W-BYHL009W-B GAL10P04397 699 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B SRS2P12954 1174 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B TKL1P23254 680 aaKnown RBP-0.42□□□□□ -2.48
YHL009W-BYHL009W-B TMN3P40071 706 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B GND2P53319 492 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B MSS11Q03825 758 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B GYL1Q04322 720 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B TOS4Q06266 489 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B TY1A-DR3Q12441 440 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B BNR1P40450 1375 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B ADP1P25371 1049 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B PRP19P32523 503 aaKnown RBP-0.42□□□□□ -2.48
YHL009W-BYHL009W-B UTH1P36135 365 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B PPE1P38796 400 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B NDT80P38830 627 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B DAS1P47005 663 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B RPS7BP48164 190 aaKnown RBP-0.42□□□□□ -2.48
YHL009W-BYHL009W-B RSM24Q03976 319 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B SVF1Q05515 481 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B IPK1Q06667 281 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B IRC13Q08630 104 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B OSW2Q12202 724 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B ATG2P53855 1592 aa-0.42□□□□□ -2.48
YHL009W-BYHL009W-B SNF1P06782 633 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B RPS4AP0CX35 261 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B RPS4BP0CX36 261 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B EST1P17214 699 aaPredicted RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B VBA3P25594 458 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B PRO3P32263 286 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B TIM23P32897 222 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B PGM1P33401 570 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B BOI1P38041 980 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B KSP1P38691 1029 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B TDA3P38758 523 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B QRI1P43123 477 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B HUL5P53119 910 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B SUN4P53616 420 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B ATP23P53722 227 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B IZH1Q03419 316 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B YDL057WQ07379 328 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B YLR122CQ12312 125 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B RPA190P10964 1664 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B NUP188P52593 1655 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B SPS1P08458 490 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B TUB1P09733 447 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B SPS100P13130 326 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B RAD4P14736 754 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B HRR25P29295 494 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B SHM1P37292 490 aaPredicted RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B YEN1P40028 759 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B GIC2Q06648 383 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B SIN3P22579 1536 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B APC1P53886 1748 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B MET4P32389 672 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B RRN6P32786 894 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B SLD2P34252 453 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B HRB1P38922 454 aaKnown RBP RIP-Chip data-0.43□□□□□ -2.48not detected
YHL009W-BYHL009W-B ZRG17P53735 605 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B ADD37Q03233 198 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B RSC3Q06639 885 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B RDR1Q08904 546 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B NHA1Q99271 985 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B GPM1P00950 247 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B CTT1P06115 562 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B SWI4P25302 1093 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B CCR4P31384 837 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B GRX7P38068 203 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B YIL077CP40508 320 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B YPS6P40583 537 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B SET2P46995 733 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B NPY1P53164 384 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B YMR034CQ05131 434 aaPredicted RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B ARO10Q06408 635 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B PUF3Q07807 879 aaKnown RBP RIP-Chip data-0.43□□□□□ -2.48not detected
YHL009W-BYHL009W-B NOC3Q07896 663 aaPredicted RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B YOR387CQ08910 206 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B SUT2Q12286 268 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B AI3P03877 415 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B IRS4P36115 615 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B GGA2P38817 585 aaKnown RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B UME6P39001 836 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B PSY2P40164 858 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B YGR018CP53211 109 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B CDA2Q06703 312 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B CFT2Q12102 859 aaPredicted RBP-0.43□□□□□ -2.48
YHL009W-BYHL009W-B DCS2Q12123 353 aa-0.43□□□□□ -2.48
YHL009W-BYHL009W-B BCK1Q01389 1478 aa-0.44□□□□□ -2.48
YHL009W-BYHL009W-B CYB2P00175 591 aa-0.44□□□□□ -2.48
YHL009W-BYHL009W-B REV1P12689 985 aa-0.44□□□□□ -2.48
YHL009W-BYHL009W-B GFA1P14742 717 aaKnown RBP-0.44□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms