RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C NHX1Q04121 633 aa1.64□□□□□ -2.15
SWI4YER111C YOR378WQ08902 515 aa1.64□□□□□ -2.15
SWI4YER111C TY1A-NL1Q12391 440 aaKnown RBP1.64□□□□□ -2.15
SWI4YER111C RMP1Q12530 201 aa1.64□□□□□ -2.15
SWI4YER111C DNF2Q12675 1612 aa1.63□□□□□ -2.15
SWI4YER111C CDC25P04821 1589 aa1.63□□□□□ -2.15
SWI4YER111C NOT3P06102 836 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C PFK1P16861 987 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C HCA4P20448 770 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C AEP2P22136 580 aa1.63□□□□□ -2.15
SWI4YER111C YCL002CP25565 263 aa1.63□□□□□ -2.15
SWI4YER111C CYS3P31373 394 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C HOG1P32485 435 aa1.63□□□□□ -2.15
SWI4YER111C MTC2P34246 357 aa1.63□□□□□ -2.15
SWI4YER111C PAF1P38351 445 aa1.63□□□□□ -2.15
SWI4YER111C TSL1P38427 1098 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C RIM4P38741 713 aa1.63□□□□□ -2.15
SWI4YER111C RPN3P40016 523 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C SBE2P42223 864 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C CAF16P43569 289 aa1.63□□□□□ -2.15
SWI4YER111C COG6P53959 839 aa1.63□□□□□ -2.15
SWI4YER111C SRT1Q03175 343 aa1.63□□□□□ -2.15
SWI4YER111C LRS4Q04087 347 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C HPF1Q05164 967 aa1.63□□□□□ -2.15
SWI4YER111C AI1P03875 834 aa1.63□□□□□ -2.15
SWI4YER111C TRK2P28584 889 aa1.63□□□□□ -2.15
SWI4YER111C COQ2P32378 372 aa1.63□□□□□ -2.15
SWI4YER111C YKR075CP36155 307 aa1.63□□□□□ -2.15
SWI4YER111C POA1P38218 177 aa1.63□□□□□ -2.15
SWI4YER111C PIK1P39104 1066 aa1.63□□□□□ -2.15
SWI4YER111C OAF1P39720 1047 aaPredicted RBP1.63□□□□□ -2.15
SWI4YER111C PEA2P40091 420 aa1.63□□□□□ -2.15
SWI4YER111C MGS1P40151 587 aa1.63□□□□□ -2.15
SWI4YER111C YIL108WP40483 696 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C RLP7P40693 322 aaKnown RBP1.63□□□□□ -2.15
SWI4YER111C PRY1P47032 299 aa1.63□□□□□ -2.15
SWI4YER111C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
SWI4YER111C RCM1P53972 490 aa1.63□□□□□ -2.15
SWI4YER111C SDH1Q00711 640 aa1.63□□□□□ -2.15
SWI4YER111C SRC1Q03707 834 aa1.63□□□□□ -2.15
SWI4YER111C YOR022CQ12204 715 aa1.63□□□□□ -2.15
SWI4YER111C NTE1Q04958 1679 aa1.62□□□□□ -2.15
SWI4YER111C KIN2P13186 1147 aaKnown RBP1.62□□□□□ -2.15
SWI4YER111C MRS6P32864 603 aaKnown RBP1.62□□□□□ -2.15
SWI4YER111C YEL1P34225 687 aa1.62□□□□□ -2.15
SWI4YER111C MCD4P36051 919 aa1.62□□□□□ -2.15
SWI4YER111C FUI1P38196 639 aa1.62□□□□□ -2.15
SWI4YER111C HSL7P38274 827 aa1.62□□□□□ -2.15
SWI4YER111C PCM1P38628 557 aaKnown RBP1.62□□□□□ -2.15
SWI4YER111C SET5P38890 526 aaKnown RBP1.62□□□□□ -2.15
SWI4YER111C MMM1P41800 426 aa1.62□□□□□ -2.15
SWI4YER111C YNL034WP53963 612 aa1.62□□□□□ -2.15
SWI4YER111C YNL018CP53976 612 aa1.62□□□□□ -2.15
SWI4YER111C ATP25Q03153 612 aa1.62□□□□□ -2.15
SWI4YER111C HIM1Q06674 414 aa1.62□□□□□ -2.15
SWI4YER111C FUN30P31380 1131 aa1.62□□□□□ -2.15
SWI4YER111C YKU70P32807 602 aa1.62□□□□□ -2.15
SWI4YER111C SRP101P32916 621 aa1.62□□□□□ -2.15
SWI4YER111C AFR1P33304 620 aa1.62□□□□□ -2.15
SWI4YER111C MDL2P33311 773 aa1.62□□□□□ -2.15
SWI4YER111C NIC96P34077 839 aa1.62□□□□□ -2.15
SWI4YER111C YKL133CP36066 463 aa1.62□□□□□ -2.15
SWI4YER111C GIC1P38785 314 aa1.62□□□□□ -2.15
SWI4YER111C PTC7P38797 343 aa1.62□□□□□ -2.15
SWI4YER111C NAB3P38996 802 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
SWI4YER111C NPP2P39997 493 aa1.62□□□□□ -2.15
SWI4YER111C BNA2P47125 453 aa1.62□□□□□ -2.15
SWI4YER111C ALT1P52893 592 aa1.62□□□□□ -2.15
SWI4YER111C RSM24Q03976 319 aa1.62□□□□□ -2.15
SWI4YER111C RPN7Q06103 429 aaKnown RBP1.62□□□□□ -2.15
SWI4YER111C RCL1Q08096 367 aaPredicted RBP1.62□□□□□ -2.15
SWI4YER111C YOR352WQ08816 343 aa1.62□□□□□ -2.15
SWI4YER111C YPL277CQ08989 487 aa1.62□□□□□ -2.15
SWI4YER111C YPR027CQ12079 277 aa1.62□□□□□ -2.15
SWI4YER111C YVC1Q12324 675 aa1.62□□□□□ -2.15
SWI4YER111C DPH6Q12429 685 aa1.62□□□□□ -2.15
SWI4YER111C Q0142Q9ZZW4 58 aa1.62□□□□□ -2.15
SWI4YER111C SNF5P18480 905 aa1.62□□□□□ -2.15
SWI4YER111C RPD3P32561 433 aa1.62□□□□□ -2.15
SWI4YER111C SWE1P32944 819 aa1.62□□□□□ -2.15
SWI4YER111C TAT1P38085 619 aa1.62□□□□□ -2.15
SWI4YER111C RFC5P38251 354 aa1.62□□□□□ -2.15
SWI4YER111C GZF3P42944 551 aaKnown RBP1.62□□□□□ -2.15
SWI4YER111C HFM1P51979 1187 aa1.62□□□□□ -2.15
SWI4YER111C SLD3P53135 668 aa1.62□□□□□ -2.15
SWI4YER111C BUD9P53226 547 aa1.62□□□□□ -2.15
SWI4YER111C PTA1Q01329 785 aaPredicted RBP1.62□□□□□ -2.15
SWI4YER111C MET14Q02196 202 aa1.62□□□□□ -2.15
SWI4YER111C COG8Q04632 607 aa1.62□□□□□ -2.15
SWI4YER111C YDR338CQ05497 695 aa1.62□□□□□ -2.15
SWI4YER111C RSC58Q07979 502 aa1.62□□□□□ -2.15
SWI4YER111C PDR15Q04182 1529 aaKnown RBP1.61□□□□□ -2.15
SWI4YER111C SPS1P08458 490 aa1.61□□□□□ -2.15
SWI4YER111C PWP2P25635 923 aaKnown RBP1.61□□□□□ -2.15
SWI4YER111C DPB3P27344 201 aa1.61□□□□□ -2.15
SWI4YER111C URA1P28272 314 aaPredicted RBP1.61□□□□□ -2.15
SWI4YER111C PTP2P29461 750 aa1.61□□□□□ -2.15
SWI4YER111C SEC65P29478 273 aa1.61□□□□□ -2.15
SWI4YER111C VPS24P36095 224 aaKnown RBP1.61□□□□□ -2.15
SWI4YER111C DID4P36108 232 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms