RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C SAN1P22470 610 aa6.15□□□□□ -1.42
PDB1YBR221C CMK1P27466 446 aaKnown RBP6.15□□□□□ -1.42
PDB1YBR221C SBA1P28707 216 aaKnown RBP6.15□□□□□ -1.42
PDB1YBR221C FUN30P31380 1131 aa6.15□□□□□ -1.42
PDB1YBR221C NGR1P32831 672 aaKnown RBP6.15□□□□□ -1.42
PDB1YBR221C DSS1P39112 969 aa6.15□□□□□ -1.42
PDB1YBR221C EMW1P42842 904 aaKnown RBP6.15□□□□□ -1.42
PDB1YBR221C SET2P46995 733 aaKnown RBP6.15□□□□□ -1.42
PDB1YBR221C TUB4P53378 473 aa6.15□□□□□ -1.42
PDB1YBR221C HST1P53685 503 aa6.15□□□□□ -1.42
PDB1YBR221C TDA9Q04545 1251 aa6.15□□□□□ -1.42
PDB1YBR221C GSF2Q04697 403 aaKnown RBP6.15□□□□□ -1.42
PDB1YBR221C SPP382Q06411 708 aaPredicted RBP6.15□□□□□ -1.42
PDB1YBR221C AOS1Q06624 347 aa6.15□□□□□ -1.42
PDB1YBR221C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
PDB1YBR221C TAH18Q12181 623 aa6.15□□□□□ -1.42
PDB1YBR221C RUD3Q12234 484 aaKnown RBP6.15□□□□□ -1.42
PDB1YBR221C RRP36Q12481 300 aaPredicted RBP6.15□□□□□ -1.42
PDB1YBR221C POM152P39685 1337 aa6.15□□□□□ -1.43
PDB1YBR221C YLL066CQ99208 1374 aa6.15□□□□□ -1.43
PDB1YBR221C GCR1P07261 785 aa6.14□□□□□ -1.43
PDB1YBR221C MER1P16523 270 aa6.14□□□□□ -1.43
PDB1YBR221C PET123P17558 318 aa6.14□□□□□ -1.43
PDB1YBR221C GSY1P23337 708 aa6.14□□□□□ -1.43
PDB1YBR221C SRO9P25567 434 aaKnown RBP6.14□□□□□ -1.43
PDB1YBR221C DBF4P32325 704 aa6.14□□□□□ -1.43
PDB1YBR221C DAL1P32375 460 aa6.14□□□□□ -1.43
PDB1YBR221C NPL6P32832 435 aa6.14□□□□□ -1.43
PDB1YBR221C ORC2P32833 620 aa6.14□□□□□ -1.43
PDB1YBR221C RPC37P36121 282 aa6.14□□□□□ -1.43
PDB1YBR221C VBA5P36172 582 aa6.14□□□□□ -1.43
PDB1YBR221C PFF1P38244 976 aa6.14□□□□□ -1.43
PDB1YBR221C TIF5P38431 405 aaKnown RBP6.14□□□□□ -1.43
PDB1YBR221C NOP16P40007 231 aaKnown RBP6.14□□□□□ -1.43
PDB1YBR221C SEC26P41810 973 aaKnown RBP6.14□□□□□ -1.43
PDB1YBR221C ROG3P43602 733 aa6.14□□□□□ -1.43
PDB1YBR221C NIT2P47016 307 aa6.14□□□□□ -1.43
PDB1YBR221C RNR4P49723 345 aaKnown RBP6.14□□□□□ -1.43
PDB1YBR221C YPL109CQ02981 657 aa6.14□□□□□ -1.43
PDB1YBR221C SYF1Q04048 859 aaPredicted RBP6.14□□□□□ -1.43
PDB1YBR221C TAF11Q04226 346 aa6.14□□□□□ -1.43
PDB1YBR221C TAP42Q04372 366 aa6.14□□□□□ -1.43
PDB1YBR221C YKU80Q04437 629 aa6.14□□□□□ -1.43
PDB1YBR221C GAD1Q04792 585 aa6.14□□□□□ -1.43
PDB1YBR221C EIS1Q05050 843 aaKnown RBP6.14□□□□□ -1.43
PDB1YBR221C ARV1Q06541 321 aa6.14□□□□□ -1.43
PDB1YBR221C CLP1Q08685 445 aaPredicted RBP6.14□□□□□ -1.43
PDB1YBR221C PCL8Q08966 492 aa6.14□□□□□ -1.43
PDB1YBR221C PFK1P16861 987 aaKnown RBP6.13□□□□□ -1.43
PDB1YBR221C SEC2P17065 759 aa6.13□□□□□ -1.43
PDB1YBR221C SWC3P31376 625 aa6.13□□□□□ -1.43
PDB1YBR221C MKK2P32491 506 aa6.13□□□□□ -1.43
PDB1YBR221C SMC1P32908 1225 aa6.13□□□□□ -1.43
PDB1YBR221C ARC19P33204 171 aaKnown RBP6.13□□□□□ -1.43
PDB1YBR221C RIB7P33312 244 aa6.13□□□□□ -1.43
PDB1YBR221C SPC29P33419 253 aa6.13□□□□□ -1.43
PDB1YBR221C PSY4P38193 441 aa6.13□□□□□ -1.43
PDB1YBR221C OTU2P38747 307 aaKnown RBP6.13□□□□□ -1.43
PDB1YBR221C AXL1P40851 1208 aa6.13□□□□□ -1.43
PDB1YBR221C GCD10P41814 478 aa6.13□□□□□ -1.43
PDB1YBR221C ERR3P42222 437 aa6.13□□□□□ -1.43
PDB1YBR221C SPO74P45819 413 aa6.13□□□□□ -1.43
PDB1YBR221C FYV8P46949 817 aaKnown RBP6.13□□□□□ -1.43
PDB1YBR221C SUT1P53032 299 aaKnown RBP6.13□□□□□ -1.43
PDB1YBR221C PIL1P53252 339 aaKnown RBP6.13□□□□□ -1.43
PDB1YBR221C SEC5P89102 971 aa6.13□□□□□ -1.43
PDB1YBR221C YCS4Q06156 1176 aa6.13□□□□□ -1.43
PDB1YBR221C DBP9Q06218 594 aaKnown RBP6.13□□□□□ -1.43
PDB1YBR221C YPR084WQ06821 456 aa6.13□□□□□ -1.43
PDB1YBR221C BRE4Q07660 1125 aa6.13□□□□□ -1.43
PDB1YBR221C INP54Q08227 384 aaKnown RBP6.13□□□□□ -1.43
PDB1YBR221C YRM1Q12340 786 aa6.13□□□□□ -1.43
PDB1YBR221C YMR084WA2P2R3 262 aa6.12□□□□□ -1.43
PDB1YBR221C MSS18P08593 268 aa6.12□□□□□ -1.43
PDB1YBR221C PRP9P19736 530 aaKnown RBP6.12□□□□□ -1.43
PDB1YBR221C SDH2P21801 266 aa6.12□□□□□ -1.43
PDB1YBR221C RPC53P25441 422 aa6.12□□□□□ -1.43
PDB1YBR221C LYP1P32487 611 aa6.12□□□□□ -1.43
PDB1YBR221C NTH2P35172 780 aa6.12□□□□□ -1.43
PDB1YBR221C CCL1P37366 393 aa6.12□□□□□ -1.43
PDB1YBR221C SPT8P38915 602 aa6.12□□□□□ -1.43
PDB1YBR221C ALR2P43553 858 aa6.12□□□□□ -1.43
PDB1YBR221C LAM5P43560 674 aa6.12□□□□□ -1.43
PDB1YBR221C IRC6P43615 237 aa6.12□□□□□ -1.43
PDB1YBR221C GUP1P53154 560 aa6.12□□□□□ -1.43
PDB1YBR221C YBP2P53169 641 aa6.12□□□□□ -1.43
PDB1YBR221C ALF1P53904 254 aa6.12□□□□□ -1.43
PDB1YBR221C KRE33P53914 1056 aaKnown RBP6.12□□□□□ -1.43
PDB1YBR221C YML133CQ03099 1374 aa6.12□□□□□ -1.43
PDB1YBR221C ARA2Q04212 335 aa6.12□□□□□ -1.43
PDB1YBR221C YLL067CQ07888 1374 aa6.12□□□□□ -1.43
PDB1YBR221C TUM1Q08686 304 aaKnown RBP6.12□□□□□ -1.43
PDB1YBR221C REX3Q12090 404 aa6.12□□□□□ -1.43
PDB1YBR221C YLR278CQ05854 1341 aa6.11□□□□□ -1.43
PDB1YBR221C AI4P03878 556 aa6.11□□□□□ -1.43
PDB1YBR221C RPL5P26321 297 aaKnown RBP6.11□□□□□ -1.43
PDB1YBR221C RPN2P32565 945 aaKnown RBP6.11□□□□□ -1.43
PDB1YBR221C PAH1P32567 862 aa6.11□□□□□ -1.43
PDB1YBR221C MCM7P38132 845 aa6.11□□□□□ -1.43
PDB1YBR221C YHR131CP38835 850 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms