RNA–Protein interactions for RNA: ENST00000642127.1

HCCAT5-202, hepatocellular carcinoma associated transcript 5, humanhuman

BASIC

Gene HCCAT5, Length 1,029 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-202ENST00000642127 CDCA8Q53HL2 280 aa11.3□□□□□ -0.6
HCCAT5-202ENST00000642127 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
HCCAT5-202ENST00000642127 MAP3K5Q99683 1374 aa11.29□□□□□ -0.6
HCCAT5-202ENST00000642127 GOLGB1Q14789 3259 aaKnown RBP11.29□□□□□ -0.6
HCCAT5-202ENST00000642127 PDE4DQ08499 809 aa11.29□□□□□ -0.6
HCCAT5-202ENST00000642127 CHD4Q14839 1912 aa11.29□□□□□ -0.6
HCCAT5-202ENST00000642127 ITGBL1O95965 494 aaPredicted RBP11.28□□□□□ -0.6
HCCAT5-202ENST00000642127 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
HCCAT5-202ENST00000642127 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
HCCAT5-202ENST00000642127 AMIGO3Q86WK7 504 aa11.28□□□□□ -0.6
HCCAT5-202ENST00000642127 CGNL1Q0VF96 1302 aa11.28□□□□□ -0.6
HCCAT5-202ENST00000642127 SLC10A3P09131 477 aa11.27□□□□□ -0.61
HCCAT5-202ENST00000642127 C4BP0C0L5 1744 aa11.26□□□□□ -0.61
HCCAT5-202ENST00000642127 PKD1L3Q7Z443 1732 aa11.26□□□□□ -0.61
HCCAT5-202ENST00000642127 ITGB4P16144 1822 aa11.26□□□□□ -0.61
HCCAT5-202ENST00000642127 CFHP08603 1231 aa11.26□□□□□ -0.61
HCCAT5-202ENST00000642127 KMT5BQ4FZB7 885 aa11.26□□□□□ -0.61
HCCAT5-202ENST00000642127 ZNF526Q8TF50 670 aaPredicted RBP11.26□□□□□ -0.61
HCCAT5-202ENST00000642127 PIGBQ92521 554 aa11.26□□□□□ -0.61
HCCAT5-202ENST00000642127 REPIN1Q9BWE0 567 aaKnown RBP11.26□□□□□ -0.61
HCCAT5-202ENST00000642127 GIGYF1O75420 1035 aaPredicted RBP11.25□□□□□ -0.61
HCCAT5-202ENST00000642127 C1QTNF8P60827 252 aa11.25□□□□□ -0.61
HCCAT5-202ENST00000642127 GIGYF2Q6Y7W6 1299 aaKnown RBP11.25□□□□□ -0.61
HCCAT5-202ENST00000642127 TMUB1Q9BVT8 246 aa11.25□□□□□ -0.61
HCCAT5-202ENST00000642127 TMOD3Q9NYL9 352 aa11.25□□□□□ -0.61
HCCAT5-202ENST00000642127 SPG7Q9UQ90 795 aa11.25□□□□□ -0.61
HCCAT5-202ENST00000642127 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
HCCAT5-202ENST00000642127 COL24A1Q17RW2 1714 aa11.24□□□□□ -0.61
HCCAT5-202ENST00000642127 SSTR3P32745 418 aaPredicted RBP11.24□□□□□ -0.61
HCCAT5-202ENST00000642127 APLP1P51693 650 aa11.24□□□□□ -0.61
HCCAT5-202ENST00000642127 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
HCCAT5-202ENST00000642127 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
HCCAT5-202ENST00000642127 PRR14Q9BWN1 585 aa11.24□□□□□ -0.61
HCCAT5-202ENST00000642127 FAM217BQ9NTX9 383 aaPredicted RBP11.24□□□□□ -0.61
HCCAT5-202ENST00000642127 ASAP1Q9ULH1 1129 aa11.24□□□□□ -0.61
HCCAT5-202ENST00000642127 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
HCCAT5-202ENST00000642127 ANKRD26Q9UPS8 1709 aa11.23□□□□□ -0.61
HCCAT5-202ENST00000642127 LOC102724428A0A0B4J2F2 783 aa11.23□□□□□ -0.61
HCCAT5-202ENST00000642127 SIK1P57059 783 aa11.23□□□□□ -0.61
HCCAT5-202ENST00000642127 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
HCCAT5-202ENST00000642127 SMARCC1Q92922 1105 aaPredicted RBP11.23□□□□□ -0.61
HCCAT5-202ENST00000642127 POLKQ9UBT6 870 aa11.23□□□□□ -0.61
HCCAT5-202ENST00000642127 MAP2P11137 1827 aaKnown RBP11.23□□□□□ -0.61
HCCAT5-202ENST00000642127 PHKG2P15735 406 aa11.22□□□□□ -0.61
HCCAT5-202ENST00000642127 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
HCCAT5-202ENST00000642127 ITPK1Q13572 414 aa11.22□□□□□ -0.61
HCCAT5-202ENST00000642127 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
HCCAT5-202ENST00000642127 ATP10DQ9P241 1426 aa11.21□□□□□ -0.61
HCCAT5-202ENST00000642127 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
HCCAT5-202ENST00000642127 HSPA5P11021 654 aaKnown RBP11.21□□□□□ -0.61
HCCAT5-202ENST00000642127 CD46P15529 392 aa11.21□□□□□ -0.61
HCCAT5-202ENST00000642127 FLAD1Q8NFF5 587 aa11.21□□□□□ -0.61
HCCAT5-202ENST00000642127 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.62
HCCAT5-202ENST00000642127 NCAPD2Q15021 1401 aa11.2□□□□□ -0.62
HCCAT5-202ENST00000642127 GRIN3BO60391 1043 aa11.2□□□□□ -0.62
HCCAT5-202ENST00000642127 CNGB1Q14028 1251 aaPredicted RBP11.2□□□□□ -0.62
HCCAT5-202ENST00000642127 IFNL2Q8IZJ0 200 aa11.2□□□□□ -0.62
HCCAT5-202ENST00000642127 PANK3Q9H999 370 aa11.2□□□□□ -0.62
HCCAT5-202ENST00000642127 GCGRP47871 477 aa11.19□□□□□ -0.62
HCCAT5-202ENST00000642127 ATG3Q9NT62 314 aa11.19□□□□□ -0.62
HCCAT5-202ENST00000642127 ACTN4O43707 911 aaKnown RBP11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 MMP10P09238 476 aa11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 SSFA2P28290 1259 aa11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 EIF4G2P78344 907 aaKnown RBP eCLIP11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 ZNF530Q6P9A1 599 aaPredicted RBP11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 Q6ZNB5 142 aa11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 AEBP1Q8IUX7 1158 aa11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 CCER1Q8TC90 406 aaPredicted RBP11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 GPBP1L1Q9HC44 474 aaPredicted RBP11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 PCDHB3Q9Y5E6 796 aa11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 CD2APQ9Y5K6 639 aa11.18□□□□□ -0.62
HCCAT5-202ENST00000642127 NEUROD2Q15784 382 aa11.17□□□□□ -0.62
HCCAT5-202ENST00000642127 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
HCCAT5-202ENST00000642127 CICQ96RK0 1608 aaPredicted RBP11.17□□□□□ -0.62
HCCAT5-202ENST00000642127 PTCD1O75127 700 aaKnown RBP11.16□□□□□ -0.62
HCCAT5-202ENST00000642127 MS4A1P11836 297 aa11.16□□□□□ -0.62
HCCAT5-202ENST00000642127 CABP4P57796 275 aa11.16□□□□□ -0.62
HCCAT5-202ENST00000642127 COPS2P61201 443 aa11.16□□□□□ -0.62
HCCAT5-202ENST00000642127 NUTM1Q86Y26 1132 aa11.16□□□□□ -0.62
HCCAT5-202ENST00000642127 BEGAINQ9BUH8 593 aa11.16□□□□□ -0.62
HCCAT5-202ENST00000642127 KDM6AO15550 1401 aaPredicted RBP11.16□□□□□ -0.62
HCCAT5-202ENST00000642127 KDRP35968 1356 aa11.16□□□□□ -0.62
HCCAT5-202ENST00000642127 LCE2BO14633 110 aa11.15□□□□□ -0.62
HCCAT5-202ENST00000642127 PLEKHO1Q53GL0 409 aaPredicted RBP11.15□□□□□ -0.62
HCCAT5-202ENST00000642127 C1orf141Q5JVX7 400 aa11.15□□□□□ -0.62
HCCAT5-202ENST00000642127 SLC4A9Q96Q91 983 aa11.15□□□□□ -0.62
HCCAT5-202ENST00000642127 RTCBQ9Y3I0 505 aaKnown RBP11.15□□□□□ -0.62
HCCAT5-202ENST00000642127 KDM4AO75164 1064 aa11.14□□□□□ -0.63
HCCAT5-202ENST00000642127 MTHFSP49914 203 aa11.14□□□□□ -0.63
HCCAT5-202ENST00000642127 FUT2Q10981 343 aa11.14□□□□□ -0.63
HCCAT5-202ENST00000642127 TRAPPC3LQ5T215 181 aa11.14□□□□□ -0.63
HCCAT5-202ENST00000642127 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
HCCAT5-202ENST00000642127 MTRQ99707 1265 aa11.14□□□□□ -0.63
HCCAT5-202ENST00000642127 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
HCCAT5-202ENST00000642127 BCS1LQ9Y276 419 aa11.14□□□□□ -0.63
HCCAT5-202ENST00000642127 N4BP2Q86UW6 1770 aaPredicted RBP11.13□□□□□ -0.63
HCCAT5-202ENST00000642127 PXDNLA1KZ92 1463 aa11.13□□□□□ -0.63
HCCAT5-202ENST00000642127 A0A0G2JLW4 131 aa11.13□□□□□ -0.63
HCCAT5-202ENST00000642127 PUS10Q3MIT2 529 aaKnown RBP11.13□□□□□ -0.63
HCCAT5-202ENST00000642127 GRIPAP1Q4V328 841 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms