RNA–Protein interactions for RNA: ENST00000641496.1

CASC19-235, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,154 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-235ENST00000641496 NPR1P16066 1061 aa12.51□□□□□ -0.41
CASC19-235ENST00000641496 GNAI1P63096 354 aa12.51□□□□□ -0.41
CASC19-235ENST00000641496 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
CASC19-235ENST00000641496 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
CASC19-235ENST00000641496 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
CASC19-235ENST00000641496 LAMB2P55268 1798 aa12.51□□□□□ -0.41
CASC19-235ENST00000641496 HOXB7P09629 217 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 LMNB1P20700 586 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 TSPYL6Q8N831 410 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 NYXQ9GZU5 481 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
CASC19-235ENST00000641496 TAF1P21675 1872 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 IBTKQ9P2D0 1353 aaPredicted RBP12.49□□□□□ -0.41
CASC19-235ENST00000641496 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
CASC19-235ENST00000641496 NLRP10Q86W26 655 aa12.49□□□□□ -0.41
CASC19-235ENST00000641496 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
CASC19-235ENST00000641496 TCERG1O14776 1098 aaKnown RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 CALD1Q05682 793 aaKnown RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 TCIRG1Q13488 830 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 CRY2Q49AN0 593 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 PARP10Q53GL7 1025 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 FAM9BQ8IZU0 186 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 PHAXQ9H814 394 aaKnown RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 DBF4Q9UBU7 674 aaPredicted RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
CASC19-235ENST00000641496 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
CASC19-235ENST00000641496 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
CASC19-235ENST00000641496 RRAGCQ9HB90 399 aa12.47□□□□□ -0.41
CASC19-235ENST00000641496 RIC1Q4ADV7 1423 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 DDX60Q8IY21 1712 aaKnown RBP12.46□□□□□ -0.41
CASC19-235ENST00000641496 LTBP3Q9NS15 1303 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 PLBD2Q8NHP8 589 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
CASC19-235ENST00000641496 HYPKQ9NX55 129 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 SNED1Q8TER0 1413 aa12.45□□□□□ -0.42
CASC19-235ENST00000641496 HOXA10P31260 410 aaPredicted RBP12.45□□□□□ -0.42
CASC19-235ENST00000641496 HSP90AB3PQ58FF7 597 aa12.45□□□□□ -0.42
CASC19-235ENST00000641496 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
CASC19-235ENST00000641496 SLC10A5Q5PT55 438 aa12.45□□□□□ -0.42
CASC19-235ENST00000641496 ISCA1Q9BUE6 129 aa12.45□□□□□ -0.42
CASC19-235ENST00000641496 ZNF277Q9NRM2 450 aaPredicted RBP12.45□□□□□ -0.42
CASC19-235ENST00000641496 TRMT112Q9UI30 125 aaKnown RBP12.45□□□□□ -0.42
CASC19-235ENST00000641496 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 GLTPD2A6NH11 291 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 ALDH1B1P30837 517 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
CASC19-235ENST00000641496 SOGA3Q5TF21 947 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 NLRP3Q96P20 1036 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
CASC19-235ENST00000641496 COL4A1P02462 1669 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 SH3TC1Q8TE82 1336 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 COL4A5P29400 1685 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 POTECB2RU33 542 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 RIC3Q7Z5B4 369 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 JARID2Q92833 1246 aaPredicted RBP12.43□□□□□ -0.42
CASC19-235ENST00000641496 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 RBM17Q96I25 401 aaKnown RBP12.43□□□□□ -0.42
CASC19-235ENST00000641496 CRAMP1Q96RY5 1269 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 ABCC4O15439 1325 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 IL16Q14005 1332 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 FANCIQ9NVI1 1328 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 ZC3H4Q9UPT8 1303 aaKnown RBP12.42□□□□□ -0.42
CASC19-235ENST00000641496 PPEF1O14829 653 aaPredicted RBP12.42□□□□□ -0.42
CASC19-235ENST00000641496 TOMM70O94826 608 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
CASC19-235ENST00000641496 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
CASC19-235ENST00000641496 CCDC30Q5VVM6 783 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 G2E3Q7L622 706 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 MYD88Q99836 296 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 ZNF541Q9H0D2 1346 aa12.41□□□□□ -0.42
CASC19-235ENST00000641496 HSPA6P17066 643 aa12.41□□□□□ -0.42
CASC19-235ENST00000641496 RTKN2Q8IZC4 609 aa12.41□□□□□ -0.42
CASC19-235ENST00000641496 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
CASC19-235ENST00000641496 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
CASC19-235ENST00000641496 EXOSC9Q06265 439 aaKnown RBP12.4□□□□□ -0.42
CASC19-235ENST00000641496 WDR63Q8IWG1 891 aa12.4□□□□□ -0.42
CASC19-235ENST00000641496 C16orf71Q8IYS4 520 aaPredicted RBP12.4□□□□□ -0.42
CASC19-235ENST00000641496 VEGFAP15692 232 aaPredicted RBP12.39□□□□□ -0.43
CASC19-235ENST00000641496 TRIM28Q13263 835 aaKnown RBP12.39□□□□□ -0.43
CASC19-235ENST00000641496 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
CASC19-235ENST00000641496 MAP3K2Q9Y2U5 619 aa12.39□□□□□ -0.43
CASC19-235ENST00000641496 CACNA1FO60840 1977 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
CASC19-235ENST00000641496 VAMP4O75379 141 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 HTRA3P83110 453 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 DDX46Q7L014 1031 aaKnown RBP12.38□□□□□ -0.43
CASC19-235ENST00000641496 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 PSMD1Q99460 953 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms