RNA–Protein interactions for RNA: ENST00000641496.1

CASC19-235, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,154 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-235ENST00000641496 NPR1P16066 1061 aa12.51□□□□□ -0.41
CASC19-235ENST00000641496 GNAI1P63096 354 aa12.51□□□□□ -0.41
CASC19-235ENST00000641496 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
CASC19-235ENST00000641496 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
CASC19-235ENST00000641496 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
CASC19-235ENST00000641496 LAMB2P55268 1798 aa12.51□□□□□ -0.41
CASC19-235ENST00000641496 HOXB7P09629 217 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 LMNB1P20700 586 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 TSPYL6Q8N831 410 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 NYXQ9GZU5 481 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
CASC19-235ENST00000641496 TAF1P21675 1872 aa12.5□□□□□ -0.41
CASC19-235ENST00000641496 IBTKQ9P2D0 1353 aaPredicted RBP12.49□□□□□ -0.41
CASC19-235ENST00000641496 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
CASC19-235ENST00000641496 NLRP10Q86W26 655 aa12.49□□□□□ -0.41
CASC19-235ENST00000641496 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
CASC19-235ENST00000641496 TCERG1O14776 1098 aaKnown RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 CALD1Q05682 793 aaKnown RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 TCIRG1Q13488 830 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 CRY2Q49AN0 593 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 PARP10Q53GL7 1025 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 FAM9BQ8IZU0 186 aa12.48□□□□□ -0.41
CASC19-235ENST00000641496 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 PHAXQ9H814 394 aaKnown RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 DBF4Q9UBU7 674 aaPredicted RBP12.48□□□□□ -0.41
CASC19-235ENST00000641496 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
CASC19-235ENST00000641496 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
CASC19-235ENST00000641496 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
CASC19-235ENST00000641496 RRAGCQ9HB90 399 aa12.47□□□□□ -0.41
CASC19-235ENST00000641496 RIC1Q4ADV7 1423 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 DDX60Q8IY21 1712 aaKnown RBP12.46□□□□□ -0.41
CASC19-235ENST00000641496 LTBP3Q9NS15 1303 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 PLBD2Q8NHP8 589 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
CASC19-235ENST00000641496 HYPKQ9NX55 129 aa12.46□□□□□ -0.41
CASC19-235ENST00000641496 SNED1Q8TER0 1413 aa12.45□□□□□ -0.42
CASC19-235ENST00000641496 HOXA10P31260 410 aaPredicted RBP12.45□□□□□ -0.42
CASC19-235ENST00000641496 HSP90AB3PQ58FF7 597 aa12.45□□□□□ -0.42
CASC19-235ENST00000641496 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
CASC19-235ENST00000641496 SLC10A5Q5PT55 438 aa12.45□□□□□ -0.42
CASC19-235ENST00000641496 ISCA1Q9BUE6 129 aa12.45□□□□□ -0.42
CASC19-235ENST00000641496 ZNF277Q9NRM2 450 aaPredicted RBP12.45□□□□□ -0.42
CASC19-235ENST00000641496 TRMT112Q9UI30 125 aaKnown RBP12.45□□□□□ -0.42
CASC19-235ENST00000641496 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 GLTPD2A6NH11 291 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 ALDH1B1P30837 517 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 FKBP4Q02790 459 aaKnown RBP eCLIP12.44□□□□□ -0.42
CASC19-235ENST00000641496 SOGA3Q5TF21 947 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 NLRP3Q96P20 1036 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
CASC19-235ENST00000641496 COL4A1P02462 1669 aa12.44□□□□□ -0.42
CASC19-235ENST00000641496 SH3TC1Q8TE82 1336 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 COL4A5P29400 1685 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 POTECB2RU33 542 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 RIC3Q7Z5B4 369 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 JARID2Q92833 1246 aaPredicted RBP12.43□□□□□ -0.42
CASC19-235ENST00000641496 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 RBM17Q96I25 401 aaKnown RBP12.43□□□□□ -0.42
CASC19-235ENST00000641496 CRAMP1Q96RY5 1269 aa12.43□□□□□ -0.42
CASC19-235ENST00000641496 ABCC4O15439 1325 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 IL16Q14005 1332 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 FANCIQ9NVI1 1328 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 ZC3H4Q9UPT8 1303 aaKnown RBP12.42□□□□□ -0.42
CASC19-235ENST00000641496 PPEF1O14829 653 aaPredicted RBP12.42□□□□□ -0.42
CASC19-235ENST00000641496 TOMM70O94826 608 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
CASC19-235ENST00000641496 GOLGA2Q08379 1002 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 TWISTNBQ3B726 338 aaPredicted RBP12.42□□□□□ -0.42
CASC19-235ENST00000641496 CCDC30Q5VVM6 783 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 G2E3Q7L622 706 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 MYD88Q99836 296 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
CASC19-235ENST00000641496 ZNF541Q9H0D2 1346 aa12.41□□□□□ -0.42
CASC19-235ENST00000641496 HSPA6P17066 643 aa12.41□□□□□ -0.42
CASC19-235ENST00000641496 RTKN2Q8IZC4 609 aa12.41□□□□□ -0.42
CASC19-235ENST00000641496 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
CASC19-235ENST00000641496 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
CASC19-235ENST00000641496 EXOSC9Q06265 439 aaKnown RBP12.4□□□□□ -0.42
CASC19-235ENST00000641496 WDR63Q8IWG1 891 aa12.4□□□□□ -0.42
CASC19-235ENST00000641496 C16orf71Q8IYS4 520 aaPredicted RBP12.4□□□□□ -0.42
CASC19-235ENST00000641496 VEGFAP15692 232 aaPredicted RBP12.39□□□□□ -0.43
CASC19-235ENST00000641496 TRIM28Q13263 835 aaKnown RBP12.39□□□□□ -0.43
CASC19-235ENST00000641496 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
CASC19-235ENST00000641496 MAP3K2Q9Y2U5 619 aa12.39□□□□□ -0.43
CASC19-235ENST00000641496 CACNA1FO60840 1977 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
CASC19-235ENST00000641496 VAMP4O75379 141 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 HTRA3P83110 453 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 DDX46Q7L014 1031 aaKnown RBP12.38□□□□□ -0.43
CASC19-235ENST00000641496 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
CASC19-235ENST00000641496 PSMD1Q99460 953 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms