RNA–Protein interactions for RNA: ENST00000639941.1

SHISA9-205, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHISA9, Length 1,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-205ENST00000639941 C7orf43Q8WVR3 580 aa29.18■■■□□ 2.26
SHISA9-205ENST00000639941 PPP1R42Q7Z4L9 355 aa29.17■■■□□ 2.26
SHISA9-205ENST00000639941 NLRP10Q86W26 655 aa29.17■■■□□ 2.26
SHISA9-205ENST00000639941 PHAXQ9H814 394 aaKnown RBP29.17■■■□□ 2.26
SHISA9-205ENST00000639941 HSP90AB3PQ58FF7 597 aa29.16■■■□□ 2.26
SHISA9-205ENST00000639941 ANKRD13DQ6ZTN6 518 aa29.16■■■□□ 2.26
SHISA9-205ENST00000639941 UTP14AQ9BVJ6 771 aaKnown RBP29.16■■■□□ 2.26
SHISA9-205ENST00000639941 SYNE4Q8N205 404 aa29.15■■■□□ 2.26
SHISA9-205ENST00000639941 LMNB1P20700 586 aa29.14■■■□□ 2.26
SHISA9-205ENST00000639941 OLFM4Q6UX06 510 aa29.14■■■□□ 2.26
SHISA9-205ENST00000639941 ZNF428Q96B54 188 aa29.14■■■□□ 2.26
SHISA9-205ENST00000639941 TIAM2Q8IVF5 1701 aa29.14■■■□□ 2.25
SHISA9-205ENST00000639941 C1QTNF8P60827 252 aa29.13■■■□□ 2.25
SHISA9-205ENST00000639941 FANCIQ9NVI1 1328 aa29.13■■■□□ 2.25
SHISA9-205ENST00000639941 LAMB2P55268 1798 aa29.13■■■□□ 2.25
SHISA9-205ENST00000639941 WDR63Q8IWG1 891 aa29.12■■■□□ 2.25
SHISA9-205ENST00000639941 ISCA1Q9BUE6 129 aa29.12■■■□□ 2.25
SHISA9-205ENST00000639941 SPINK5Q9NQ38 1064 aaPredicted RBP29.12■■■□□ 2.25
SHISA9-205ENST00000639941 SLC10A5Q5PT55 438 aa29.11■■■□□ 2.25
SHISA9-205ENST00000639941 DICER1Q9UPY3 1922 aaKnown RBP29.1■■■□□ 2.25
SHISA9-205ENST00000639941 ATP5J2-PTCD1G3V325 749 aa29.1■■■□□ 2.25
SHISA9-205ENST00000639941 KIF3CO14782 793 aa29.1■■■□□ 2.25
SHISA9-205ENST00000639941 CCDC30Q5VVM6 783 aa29.1■■■□□ 2.25
SHISA9-205ENST00000639941 SLC51AQ86UW1 340 aa29.1■■■□□ 2.25
SHISA9-205ENST00000639941 LTBP3Q9NS15 1303 aa29.1■■■□□ 2.25
SHISA9-205ENST00000639941 HOXA10P31260 410 aaPredicted RBP29.09■■■□□ 2.25
SHISA9-205ENST00000639941 TWISTNBQ3B726 338 aaPredicted RBP29.09■■■□□ 2.25
SHISA9-205ENST00000639941 RNF123Q5XPI4 1314 aa29.09■■■□□ 2.25
SHISA9-205ENST00000639941 SNED1Q8TER0 1413 aa29.09■■■□□ 2.25
SHISA9-205ENST00000639941 TCERG1O14776 1098 aaKnown RBP29.08■■■□□ 2.25
SHISA9-205ENST00000639941 ALDH1B1P30837 517 aa29.08■■■□□ 2.25
SHISA9-205ENST00000639941 TAOK3Q9H2K8 898 aa29.08■■■□□ 2.25
SHISA9-205ENST00000639941 NMRK2Q9NPI5 230 aa29.08■■■□□ 2.25
SHISA9-205ENST00000639941 TRMT112Q9UI30 125 aaKnown RBP29.08■■■□□ 2.25
SHISA9-205ENST00000639941 DDX60Q8IY21 1712 aaKnown RBP29.08■■■□□ 2.25
SHISA9-205ENST00000639941 HCLS1P14317 486 aaPredicted RBP29.07■■■□□ 2.24
SHISA9-205ENST00000639941 CCDC93Q567U6 631 aa29.07■■■□□ 2.24
SHISA9-205ENST00000639941 SOGA3Q5TF21 947 aa29.07■■■□□ 2.24
SHISA9-205ENST00000639941 RPGRQ92834 1020 aaKnown RBP29.07■■■□□ 2.24
SHISA9-205ENST00000639941 SH3TC1Q8TE82 1336 aa29.05■■■□□ 2.24
SHISA9-205ENST00000639941 ZC3H4Q9UPT8 1303 aaKnown RBP29.05■■■□□ 2.24
SHISA9-205ENST00000639941 GOLGA2Q08379 1002 aa29.05■■■□□ 2.24
SHISA9-205ENST00000639941 RIC3Q7Z5B4 369 aa29.05■■■□□ 2.24
SHISA9-205ENST00000639941 NLRP3Q96P20 1036 aa29.05■■■□□ 2.24
SHISA9-205ENST00000639941 CRAMP1Q96RY5 1269 aa29.04■■■□□ 2.24
SHISA9-205ENST00000639941 ZNF521Q96K83 1311 aa29.03■■■□□ 2.24
SHISA9-205ENST00000639941 TRIM28Q13263 835 aaKnown RBP29.03■■■□□ 2.24
SHISA9-205ENST00000639941 RBM17Q96I25 401 aaKnown RBP29.03■■■□□ 2.24
SHISA9-205ENST00000639941 EXOSC9Q06265 439 aaKnown RBP29.02■■■□□ 2.24
SHISA9-205ENST00000639941 G2E3Q7L622 706 aa29.02■■■□□ 2.24
SHISA9-205ENST00000639941 FAM89AQ96GI7 184 aa29.02■■■□□ 2.24
SHISA9-205ENST00000639941 FKBP4Q02790 459 aaKnown RBP eCLIP29.01■■■□□ 2.23
SHISA9-205ENST00000639941 MYD88Q99836 296 aa29.01■■■□□ 2.23
SHISA9-205ENST00000639941 CHMP4AQ9BY43 222 aa29.01■■■□□ 2.23
SHISA9-205ENST00000639941 TAF1P21675 1872 aa29.01■■■□□ 2.23
SHISA9-205ENST00000639941 ABCC4O15439 1325 aa29■■■□□ 2.23
SHISA9-205ENST00000639941 VAMP4O75379 141 aa29■■■□□ 2.23
SHISA9-205ENST00000639941 RTKN2Q8IZC4 609 aa28.99■■■□□ 2.23
SHISA9-205ENST00000639941 STK31Q9BXU1 1019 aa28.99■■■□□ 2.23
SHISA9-205ENST00000639941 ZNF277Q9NRM2 450 aaPredicted RBP28.99■■■□□ 2.23
SHISA9-205ENST00000639941 KDM2BQ8NHM5 1336 aa28.98■■■□□ 2.23
SHISA9-205ENST00000639941 PPEF1O14829 653 aaPredicted RBP28.98■■■□□ 2.23
SHISA9-205ENST00000639941 RTL5Q5HYW3 569 aaPredicted RBP28.98■■■□□ 2.23
SHISA9-205ENST00000639941 METTL22Q9BUU2 404 aaPredicted RBP28.98■■■□□ 2.23
SHISA9-205ENST00000639941 MAP3K2Q9Y2U5 619 aa28.98■■■□□ 2.23
SHISA9-205ENST00000639941 COL4A1P02462 1669 aa28.97■■■□□ 2.23
SHISA9-205ENST00000639941 GLTPD2A6NH11 291 aa28.97■■■□□ 2.23
SHISA9-205ENST00000639941 SLC4A2P04920 1241 aa28.97■■■□□ 2.23
SHISA9-205ENST00000639941 RRAGCQ9HB90 399 aa28.97■■■□□ 2.23
SHISA9-205ENST00000639941 PI4KAP2A4QPH2 592 aa28.96■■■□□ 2.23
SHISA9-205ENST00000639941 DDX58O95786 925 aaKnown RBP28.96■■■□□ 2.23
SHISA9-205ENST00000639941 PI4KAP1Q8N8J0 262 aa28.96■■■□□ 2.23
SHISA9-205ENST00000639941 KSR2Q6VAB6 950 aa28.95■■■□□ 2.22
SHISA9-205ENST00000639941 CACNA1FO60840 1977 aa28.95■■■□□ 2.22
SHISA9-205ENST00000639941 COL4A5P29400 1685 aa28.94■■■□□ 2.22
SHISA9-205ENST00000639941 CCER2I3L3R5 266 aa28.94■■■□□ 2.22
SHISA9-205ENST00000639941 CCDC191Q8NCU4 936 aa28.94■■■□□ 2.22
SHISA9-205ENST00000639941 PSMD1Q99460 953 aa28.94■■■□□ 2.22
SHISA9-205ENST00000639941 MYH16Q9H6N6 1097 aa28.94■■■□□ 2.22
SHISA9-205ENST00000639941 CEP350Q5VT06 3117 aa28.94■■■□□ 2.22
SHISA9-205ENST00000639941 IRS4O14654 1257 aaPredicted RBP28.93■■■□□ 2.22
SHISA9-205ENST00000639941 IGKV5-2P06315 115 aa28.93■■■□□ 2.22
SHISA9-205ENST00000639941 CC2D2BQ6DHV5 1058 aa28.93■■■□□ 2.22
SHISA9-205ENST00000639941 ZBTB38Q8NAP3 1195 aaPredicted RBP28.93■■■□□ 2.22
SHISA9-205ENST00000639941 WDR90Q96KV7 1748 aa28.92■■■□□ 2.22
SHISA9-205ENST00000639941 JARID2Q92833 1246 aaPredicted RBP28.92■■■□□ 2.22
SHISA9-205ENST00000639941 ATP6V0A2Q9Y487 856 aa28.92■■■□□ 2.22
SHISA9-205ENST00000639941 IARSP41252 1262 aaKnown RBP28.91■■■□□ 2.22
SHISA9-205ENST00000639941 FLIIQ13045 1269 aa28.91■■■□□ 2.22
SHISA9-205ENST00000639941 SF3B3Q15393 1217 aaKnown RBP28.91■■■□□ 2.22
SHISA9-205ENST00000639941 CWC25Q9NXE8 425 aaPredicted RBP28.91■■■□□ 2.22
SHISA9-205ENST00000639941 POTECB2RU33 542 aa28.9■■■□□ 2.22
SHISA9-205ENST00000639941 TOMM70O94826 608 aa28.9■■■□□ 2.22
SHISA9-205ENST00000639941 GRAPQ13588 217 aa28.9■■■□□ 2.22
SHISA9-205ENST00000639941 DDX46Q7L014 1031 aaKnown RBP28.9■■■□□ 2.22
SHISA9-205ENST00000639941 GRAPLQ8TC17 118 aaPredicted RBP28.9■■■□□ 2.22
SHISA9-205ENST00000639941 PCCAP05165 728 aaPredicted RBP28.89■■■□□ 2.22
SHISA9-205ENST00000639941 BBOX1O75936 387 aa28.88■■■□□ 2.21
SHISA9-205ENST00000639941 LRRC37AA6NMS7 1700 aa28.88■■■□□ 2.21
SHISA9-205ENST00000639941 ZNF541Q9H0D2 1346 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms