RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 DYDC1Q8WWB3 177 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 JAKMIP2Q96AA8 810 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 SH3GL1Q99961 368 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 MMTAG2Q9BU76 263 aaKnown RBP4.98□□□□□ -1.61
SCN3A-209ENST00000639244 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.98□□□□□ -1.61
SCN3A-209ENST00000639244 INPP5BP32019 993 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 GCKP35557 465 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 NAIF1Q69YI7 327 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-209ENST00000639244 STAG2Q8N3U4 1231 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 KLF15Q9UIH9 416 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 SPAG9O60271 1321 aaKnown RBP4.98□□□□□ -1.61
SCN3A-209ENST00000639244 ANKRD13DQ6ZTN6 518 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 SUGP1Q8IWZ8 645 aaKnown RBP4.98□□□□□ -1.61
SCN3A-209ENST00000639244 ANKRD24Q8TF21 1146 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 A6NJR5 290 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 MYBL2P10244 700 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 ALDH1L2Q3SY69 923 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 BORCS6Q96GS4 357 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 CCDC114Q96M63 670 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 HDAC9Q9UKV0 1011 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 CFAP45Q9UL16 551 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 PPP1R15AO75807 674 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-209ENST00000639244 CCNCP24863 283 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 RPS6KA3P51812 740 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 SLC4A8Q2Y0W8 1093 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 MYO1HQ8N1T3 1032 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 PANK2Q9BZ23 570 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 NRDE2Q9H7Z3 1164 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 RABGAP1Q9Y3P9 1069 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 U3KPZ7 1027 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-209ENST00000639244 TPP2P29144 1249 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-209ENST00000639244 PPP4CP60510 307 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 BRD3Q15059 726 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 PCGF5Q86SE9 256 aa4.98□□□□□ -1.61
SCN3A-209ENST00000639244 SMARCC1Q92922 1105 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-209ENST00000639244 MAGEA9P43362 315 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 DEUP1Q05D60 604 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 MRPL28Q13084 256 aaKnown RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 SAMD14Q8IZD0 417 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 KANK1Q14678 1352 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 ERBB4Q15303 1308 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 ANKRD33BA6NCL7 494 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 F8VZ95 297 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 CA8P35219 290 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 SART3Q15020 963 aaKnown RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 FXNQ16595 210 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 NBPF15Q8N660 670 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 RPGRQ92834 1020 aaKnown RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 KDM1AO60341 852 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 FOSP01100 380 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 CCDC184Q52MB2 194 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 CADPS2Q86UW7 1296 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 UHMK1Q8TAS1 419 aaKnown RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 STAG1Q8WVM7 1258 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 TCP11Q8WWU5 503 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 DTNBP1Q96EV8 351 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 EPSTI1Q96J88 318 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 PLEKHG4BQ96PX9 1271 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 SLC39A3Q9BRY0 314 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 SEPT11Q9NVA2 429 aaKnown RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 SNUPNO95149 360 aaKnown RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 IGHDP01880 384 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 RASSF7Q02833 373 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 E2F4Q16254 413 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 CEP57Q86XR8 500 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 SLF2Q8IX21 1173 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 WHAMMQ8TF30 809 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 CAPS2Q9BXY5 557 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 IGSF5Q9NSI5 407 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 DHTKD1Q96HY7 919 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 GSDMAQ96QA5 445 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 EVLQ9UI08 416 aaPredicted RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 LRRFIP2Q9Y608 721 aaKnown RBP4.97□□□□□ -1.61
SCN3A-209ENST00000639244 LAMB3Q13751 1172 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 NACA2Q9H009 215 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 TRPV5Q9NQA5 729 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 TCHHQ07283 1943 aa4.97□□□□□ -1.61
SCN3A-209ENST00000639244 GTF2F1P35269 517 aaKnown RBP eCLIP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 CLK1P49759 484 aaKnown RBP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 POU5F1BQ06416 359 aa4.96□□□□□ -1.61
SCN3A-209ENST00000639244 CRYMQ14894 314 aa4.96□□□□□ -1.61
SCN3A-209ENST00000639244 CCDC144BQ3MJ40 725 aa4.96□□□□□ -1.61
SCN3A-209ENST00000639244 CCDC144CPQ8IYA2 1237 aa4.96□□□□□ -1.61
SCN3A-209ENST00000639244 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 PCSK1NQ9UHG2 260 aa4.96□□□□□ -1.61
SCN3A-209ENST00000639244 PAIP2BQ9ULR5 123 aaKnown RBP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 RPL17P18621 184 aaKnown RBP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 LMBRD2Q68DH5 695 aaPredicted RBP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 CPLX2Q6PUV4 134 aaKnown RBP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 HDAC7Q8WUI4 952 aa4.96□□□□□ -1.61
SCN3A-209ENST00000639244 BACH2Q9BYV9 841 aa4.96□□□□□ -1.61
SCN3A-209ENST00000639244 ACBD3Q9H3P7 528 aa4.96□□□□□ -1.61
SCN3A-209ENST00000639244 RPAP3Q9H6T3 665 aaPredicted RBP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 LUC7LQ9NQ29 371 aaKnown RBP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 BIN2Q9UBW5 565 aaPredicted RBP4.96□□□□□ -1.61
SCN3A-209ENST00000639244 ACAD8Q9UKU7 415 aa4.96□□□□□ -1.61
SCN3A-209ENST00000639244 MYH13Q9UKX3 1938 aa4.96□□□□□ -1.62
SCN3A-209ENST00000639244 PDAP1Q13442 181 aaKnown RBP4.96□□□□□ -1.62
SCN3A-209ENST00000639244 PTPN14Q15678 1187 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms