RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
CACNA1A-250ENST00000637809 CC2D2BQ6DHV5 1058 aa16.05■□□□□ 0.16
CACNA1A-250ENST00000637809 C3orf67Q6ZVT6 689 aa16.05■□□□□ 0.16
CACNA1A-250ENST00000637809 GPC2Q8N158 579 aa16.05■□□□□ 0.16
CACNA1A-250ENST00000637809 KDM3BQ7LBC6 1761 aa16.05■□□□□ 0.16
CACNA1A-250ENST00000637809 ERBB4Q15303 1308 aa16.04■□□□□ 0.16
CACNA1A-250ENST00000637809 SCN4AP35499 1836 aa16.04■□□□□ 0.16
CACNA1A-250ENST00000637809 TMEM88BA6NKF7 163 aa16.04■□□□□ 0.16
CACNA1A-250ENST00000637809 NTSR2O95665 410 aa16.04■□□□□ 0.16
CACNA1A-250ENST00000637809 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
CACNA1A-250ENST00000637809 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
CACNA1A-250ENST00000637809 ADAMTSL1Q8N6G6 1762 aa16.04■□□□□ 0.16
CACNA1A-250ENST00000637809 FOXN1O15353 648 aa16.03■□□□□ 0.16
CACNA1A-250ENST00000637809 VEGFBP49765 207 aa16.03■□□□□ 0.16
CACNA1A-250ENST00000637809 PDIA6Q15084 440 aa16.03■□□□□ 0.16
CACNA1A-250ENST00000637809 MAP1SQ66K74 1059 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-250ENST00000637809 CNTROBQ8N137 903 aa16.03■□□□□ 0.16
CACNA1A-250ENST00000637809 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
CACNA1A-250ENST00000637809 CRAMP1Q96RY5 1269 aa16.03■□□□□ 0.16
CACNA1A-250ENST00000637809 JDP2Q8WYK2 163 aa16.02■□□□□ 0.16
CACNA1A-250ENST00000637809 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
CACNA1A-250ENST00000637809 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
CACNA1A-250ENST00000637809 PPEF1O14829 653 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-250ENST00000637809 SCNN1DP51172 638 aa16.01■□□□□ 0.15
CACNA1A-250ENST00000637809 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
CACNA1A-250ENST00000637809 RBM17Q96I25 401 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-250ENST00000637809 PNNQ9H307 717 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-250ENST00000637809 TSPYL4Q9UJ04 414 aa16.01■□□□□ 0.15
CACNA1A-250ENST00000637809 RASSF10A6NK89 507 aa16■□□□□ 0.15
CACNA1A-250ENST00000637809 PROSER3Q2NL68 480 aa16■□□□□ 0.15
CACNA1A-250ENST00000637809 SLC10A5Q5PT55 438 aa16■□□□□ 0.15
CACNA1A-250ENST00000637809 GJA3Q9Y6H8 435 aa16■□□□□ 0.15
CACNA1A-250ENST00000637809 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-250ENST00000637809 PARP10Q53GL7 1025 aa15.99■□□□□ 0.15
CACNA1A-250ENST00000637809 PPP1R42Q7Z4L9 355 aa15.99■□□□□ 0.15
CACNA1A-250ENST00000637809 LARGE2Q8N3Y3 721 aa15.99■□□□□ 0.15
CACNA1A-250ENST00000637809 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 TCERG1O14776 1098 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 ANXA1P04083 346 aa15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 EPS15P42566 896 aa15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 LTBP1Q14766 1721 aa15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 UTP14AQ9BVJ6 771 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 BABAM1Q9NWV8 329 aa15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 WBP1LQ9NX94 342 aa15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 ATP6V0A2Q9Y487 856 aa15.98■□□□□ 0.15
CACNA1A-250ENST00000637809 NUP98P52948 1817 aa15.97■□□□□ 0.15
CACNA1A-250ENST00000637809 EIF2S2P20042 333 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-250ENST00000637809 RIPK4P57078 832 aa15.97■□□□□ 0.15
CACNA1A-250ENST00000637809 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
CACNA1A-250ENST00000637809 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
CACNA1A-250ENST00000637809 ABCC4O15439 1325 aa15.96■□□□□ 0.15
CACNA1A-250ENST00000637809 LMOD1P29536 600 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-250ENST00000637809 TMPOP42166 694 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-250ENST00000637809 CTCFP49711 727 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-250ENST00000637809 FMR1Q06787 632 aaKnown RBP eCLIP15.96■□□□□ 0.15
CACNA1A-250ENST00000637809 DEFB115Q30KQ5 88 aa15.96■□□□□ 0.15
CACNA1A-250ENST00000637809 RTFDC1Q9BY42 306 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-250ENST00000637809 PPIP5K2O43314 1243 aa15.95■□□□□ 0.14
CACNA1A-250ENST00000637809 AOC3Q16853 763 aa15.95■□□□□ 0.14
CACNA1A-250ENST00000637809 NIM1KQ8IY84 436 aa15.95■□□□□ 0.14
CACNA1A-250ENST00000637809 AIDAQ96BJ3 306 aa15.95■□□□□ 0.14
CACNA1A-250ENST00000637809 VPS33BQ9H267 617 aa15.95■□□□□ 0.14
CACNA1A-250ENST00000637809 WDR33Q9C0J8 1336 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-250ENST00000637809 USP50Q70EL3 339 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-250ENST00000637809 COPS6Q7L5N1 327 aa15.94■□□□□ 0.14
CACNA1A-250ENST00000637809 NLRP10Q86W26 655 aa15.94■□□□□ 0.14
CACNA1A-250ENST00000637809 XAGE3Q8WTP9 111 aa15.94■□□□□ 0.14
CACNA1A-250ENST00000637809 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
CACNA1A-250ENST00000637809 CXCL9Q07325 125 aa15.93■□□□□ 0.14
CACNA1A-250ENST00000637809 RALBP1Q15311 655 aa15.93■□□□□ 0.14
CACNA1A-250ENST00000637809 KRT24Q2M2I5 525 aa15.93■□□□□ 0.14
CACNA1A-250ENST00000637809 CST9Q5W186 159 aa15.93■□□□□ 0.14
CACNA1A-250ENST00000637809 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
CACNA1A-250ENST00000637809 GPRC5DQ9NZD1 345 aa15.93■□□□□ 0.14
CACNA1A-250ENST00000637809 ABT1Q9ULW3 272 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-250ENST00000637809 TRAF5O00463 557 aa15.92■□□□□ 0.14
CACNA1A-250ENST00000637809 CHL1O00533 1208 aa15.92■□□□□ 0.14
CACNA1A-250ENST00000637809 BBOX1O75936 387 aa15.92■□□□□ 0.14
CACNA1A-250ENST00000637809 LBX1P52954 281 aa15.92■□□□□ 0.14
CACNA1A-250ENST00000637809 LMOD3Q0VAK6 560 aa15.92■□□□□ 0.14
CACNA1A-250ENST00000637809 TCIRG1Q13488 830 aa15.92■□□□□ 0.14
CACNA1A-250ENST00000637809 HSP90AB3PQ58FF7 597 aa15.92■□□□□ 0.14
CACNA1A-250ENST00000637809 SP8Q8IXZ3 490 aa15.92■□□□□ 0.14
CACNA1A-250ENST00000637809 ZNRF3Q9ULT6 936 aa15.92■□□□□ 0.14
CACNA1A-250ENST00000637809 HSPA8P11142 646 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-250ENST00000637809 AIMP1Q12904 312 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-250ENST00000637809 SUPT20HQ8NEM7 779 aa15.91■□□□□ 0.14
CACNA1A-250ENST00000637809 TMX4Q9H1E5 349 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-250ENST00000637809 ADARB2Q9NS39 739 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-250ENST00000637809 GMPSP49915 693 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-250ENST00000637809 MAP2K1Q02750 393 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-250ENST00000637809 KIAA2012Q0VF49 1180 aa15.9■□□□□ 0.14
CACNA1A-250ENST00000637809 DPP8Q6V1X1 898 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-250ENST00000637809 TRMT112Q9UI30 125 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-250ENST00000637809 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
CACNA1A-250ENST00000637809 SH3TC1Q8TE82 1336 aa15.9■□□□□ 0.14
CACNA1A-250ENST00000637809 GRAPQ13588 217 aa15.89■□□□□ 0.13
CACNA1A-250ENST00000637809 CCDC146Q8IYE0 955 aa15.89■□□□□ 0.13
CACNA1A-250ENST00000637809 MPNDQ8N594 471 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms