RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 EFCAB2Q5VUJ9 269 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 MYO1HQ8N1T3 1032 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 C1orf131Q8NDD1 294 aaKnown RBP4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 CXorf38Q8TB03 319 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 CPLX3Q8WVH0 158 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 RUNDC1Q96C34 613 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 SLC39A13Q96H72 371 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 CSRNP1Q96S65 589 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 SPON2Q9BUD6 331 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 CFHR5Q9BXR6 569 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 OCEL1Q9H607 264 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 TMEM260Q9NX78 707 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 TPX2Q9ULW0 747 aaKnown RBP4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 LZTS1Q9Y250 596 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 PCDHGA4Q9Y5G9 962 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 ERBB3P21860 1342 aa4.34□□□□□ -1.71
CHRNA4-220ENST00000637628 ALG1L2C9J202 215 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 M0R2N6 131 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 SMAPO00193 183 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 TRAPPC10P48553 1259 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 POU5F1Q01860 360 aaKnown RBP4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 LRRC41Q15345 812 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 TAF1CQ15572 869 aaPredicted RBP4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 MAPRE1Q15691 268 aaKnown RBP4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 GRAMD1BQ3KR37 738 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 TKFCQ3LXA3 575 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 CT47A1Q5JQC4 288 aaPredicted RBP4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 MEI1Q5TIA1 1274 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 C14orf80Q86SX3 495 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 PACS2Q86VP3 889 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 KIAA0825Q8IV33 1275 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 CHMP7Q8WUX9 453 aaPredicted RBP4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 ANAPC16Q96DE5 110 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 SAP130Q9H0E3 1048 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 MAP10Q9P2G4 905 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 STRIP2Q9ULQ0 834 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 EFR3BQ9Y2G0 817 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 LEMD3Q9Y2U8 911 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 GPSM3Q9Y4H4 160 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 PCDHGA11Q9Y5H2 935 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 KAT6BQ8WYB5 2073 aa4.33□□□□□ -1.72
CHRNA4-220ENST00000637628 USP31Q70CQ4 1352 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 SHTN1A0MZ66 631 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 ESPNB1AK53 854 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 TIMM44O43615 452 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 RASGRP1O95267 797 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 F12P00748 615 aaPredicted RBP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 LDHCP07864 332 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 COL6A1P12109 1028 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 COL9A1P20849 921 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 CTHP32929 405 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 ATP6V1AP38606 617 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 SLC4A3P48751 1232 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 IRX5P78411 483 aaPredicted RBP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 SQSTM1Q13501 440 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 TCEA2Q15560 299 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 ICE2Q659A1 982 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 ERMP1Q7Z2K6 904 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 HDGFL2Q7Z4V5 671 aaPredicted RBP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 DDX42Q86XP3 938 aaKnown RBP eCLIP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 DZIP3Q86Y13 1208 aaKnown RBP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 DRC7Q8IY82 874 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 SDR16C5Q8N3Y7 309 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 ABTB2Q8N961 1025 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 CHAC2Q8WUX2 184 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 SCG3Q8WXD2 468 aaKnown RBP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 E2F7Q96AV8 911 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 NEUROD6Q96NK8 337 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 FAM126AQ9BYI3 521 aaPredicted RBP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 CCDC113Q9H0I3 377 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 ZNF700Q9H0M5 742 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 RBSNQ9H1K0 784 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 COPRSQ9NQ92 184 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 STIM2Q9P246 746 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 PRKAG3Q9UGI9 489 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 MCM8Q9UJA3 840 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 POLIQ9UNA4 740 aa4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 MRPS23Q9Y3D9 190 aaKnown RBP4.32□□□□□ -1.72
CHRNA4-220ENST00000637628 CCDC163A0A0D9SF12 145 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 OPLAHO14841 1288 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 ZRANB2O95218 330 aaKnown RBP eCLIP4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 ASMTLO95671 621 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 PLCG2P16885 1265 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 PMLP29590 882 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 USP4Q13107 963 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 INO80DQ53TQ3 878 aaPredicted RBP4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 PDXDC2PQ6P474 469 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 ATCAYQ86WG3 371 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 CHPFQ8IZ52 775 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 IFNL3Q8IZI9 196 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 TEX19Q8NA77 164 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 MYRIPQ8NFW9 859 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 ADAM32Q8TC27 787 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 KCNH8Q96L42 1107 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 ARHGAP9Q9BRR9 750 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 AS3MTQ9HBK9 375 aa4.31□□□□□ -1.72
CHRNA4-220ENST00000637628 GINM1Q9NU53 330 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms