RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CHADLQ6NUI6 762 aa24.2■■□□□ 1.46
CLN6-220ENST00000637450 RPGRQ92834 1020 aaKnown RBP24.2■■□□□ 1.46
CLN6-220ENST00000637450 RUNDC1Q96C34 613 aa24.2■■□□□ 1.46
CLN6-220ENST00000637450 PSMD1Q99460 953 aa24.2■■□□□ 1.46
CLN6-220ENST00000637450 ANXA1P04083 346 aa24.19■■□□□ 1.46
CLN6-220ENST00000637450 POTEIP0CG38 1075 aa24.19■■□□□ 1.46
CLN6-220ENST00000637450 POTEJP0CG39 1038 aa24.19■■□□□ 1.46
CLN6-220ENST00000637450 IARSP41252 1262 aaKnown RBP24.19■■□□□ 1.46
CLN6-220ENST00000637450 RBM17Q96I25 401 aaKnown RBP24.19■■□□□ 1.46
CLN6-220ENST00000637450 TRIM35Q9UPQ4 493 aa24.19■■□□□ 1.46
CLN6-220ENST00000637450 ZNF541Q9H0D2 1346 aa24.18■■□□□ 1.46
CLN6-220ENST00000637450 FZD9O00144 591 aa24.18■■□□□ 1.46
CLN6-220ENST00000637450 CRAMP1Q96RY5 1269 aa24.18■■□□□ 1.46
CLN6-220ENST00000637450 SNED1Q8TER0 1413 aa24.18■■□□□ 1.46
CLN6-220ENST00000637450 WDR43Q15061 677 aaKnown RBP eCLIP24.17■■□□□ 1.46
CLN6-220ENST00000637450 SLC10A5Q5PT55 438 aa24.17■■□□□ 1.46
CLN6-220ENST00000637450 C3orf67Q6ZVT6 689 aa24.17■■□□□ 1.46
CLN6-220ENST00000637450 COPS6Q7L5N1 327 aa24.17■■□□□ 1.46
CLN6-220ENST00000637450 UTP14AQ9BVJ6 771 aaKnown RBP24.17■■□□□ 1.46
CLN6-220ENST00000637450 TAF1DQ9H5J8 278 aaPredicted RBP24.17■■□□□ 1.46
CLN6-220ENST00000637450 ADAMTS8Q9UP79 889 aa24.17■■□□□ 1.46
CLN6-220ENST00000637450 GRIPAP1Q4V328 841 aa24.16■■□□□ 1.46
CLN6-220ENST00000637450 NECTIN2Q92692 538 aa24.16■■□□□ 1.46
CLN6-220ENST00000637450 NLRP3Q96P20 1036 aa24.16■■□□□ 1.46
CLN6-220ENST00000637450 XAGE3Q8WTP9 111 aa24.15■■□□□ 1.46
CLN6-220ENST00000637450 AIMP1Q12904 312 aaKnown RBP24.14■■□□□ 1.45
CLN6-220ENST00000637450 KRT24Q2M2I5 525 aa24.14■■□□□ 1.45
CLN6-220ENST00000637450 LDHDQ86WU2 507 aa24.14■■□□□ 1.45
CLN6-220ENST00000637450 DDX21Q9NR30 783 aaKnown RBP eCLIP24.14■■□□□ 1.45
CLN6-220ENST00000637450 LAS1LQ9Y4W2 734 aaKnown RBP24.14■■□□□ 1.45
CLN6-220ENST00000637450 HSP90AB3PQ58FF7 597 aa24.13■■□□□ 1.45
CLN6-220ENST00000637450 JDP2Q8WYK2 163 aa24.13■■□□□ 1.45
CLN6-220ENST00000637450 HACL1Q9UJ83 578 aa24.13■■□□□ 1.45
CLN6-220ENST00000637450 PPEF1O14829 653 aaPredicted RBP24.12■■□□□ 1.45
CLN6-220ENST00000637450 RNF123Q5XPI4 1314 aa24.11■■□□□ 1.45
CLN6-220ENST00000637450 TCIRG1Q13488 830 aa24.11■■□□□ 1.45
CLN6-220ENST00000637450 SLC51AQ86UW1 340 aa24.11■■□□□ 1.45
CLN6-220ENST00000637450 NLRP10Q86W26 655 aa24.11■■□□□ 1.45
CLN6-220ENST00000637450 GPC2Q8N158 579 aa24.11■■□□□ 1.45
CLN6-220ENST00000637450 PRKRIP1Q9H875 184 aaPredicted RBP24.11■■□□□ 1.45
CLN6-220ENST00000637450 CREBZFQ9NS37 354 aa24.11■■□□□ 1.45
CLN6-220ENST00000637450 TCERG1O14776 1098 aaKnown RBP24.1■■□□□ 1.45
CLN6-220ENST00000637450 PASKQ96RG2 1323 aa24.1■■□□□ 1.45
CLN6-220ENST00000637450 HOXB7P09629 217 aa24.09■■□□□ 1.45
CLN6-220ENST00000637450 EPHX2P34913 555 aa24.09■■□□□ 1.45
CLN6-220ENST00000637450 CFAP44Q96MT7 982 aa24.09■■□□□ 1.45
CLN6-220ENST00000637450 EIF6P56537 245 aaKnown RBP24.08■■□□□ 1.45
CLN6-220ENST00000637450 EAPPQ56P03 285 aaPredicted RBP24.08■■□□□ 1.45
CLN6-220ENST00000637450 HDGFL1Q5TGJ6 251 aa24.08■■□□□ 1.45
CLN6-220ENST00000637450 PNMA8AQ86V59 439 aaPredicted RBP24.08■■□□□ 1.45
CLN6-220ENST00000637450 LARGE2Q8N3Y3 721 aa24.08■■□□□ 1.45
CLN6-220ENST00000637450 CHPF2Q9P2E5 772 aa24.08■■□□□ 1.45
CLN6-220ENST00000637450 ATP6V0A2Q9Y487 856 aa24.08■■□□□ 1.45
CLN6-220ENST00000637450 SCN4AP35499 1836 aa24.07■■□□□ 1.44
CLN6-220ENST00000637450 ITGBL1O95965 494 aaPredicted RBP24.07■■□□□ 1.44
CLN6-220ENST00000637450 HCLS1P14317 486 aaPredicted RBP24.07■■□□□ 1.44
CLN6-220ENST00000637450 TRMT112Q9UI30 125 aaKnown RBP24.07■■□□□ 1.44
CLN6-220ENST00000637450 ABCC4O15439 1325 aa24.07■■□□□ 1.44
CLN6-220ENST00000637450 BBOX1O75936 387 aa24.06■■□□□ 1.44
CLN6-220ENST00000637450 TMX4Q9H1E5 349 aaPredicted RBP24.06■■□□□ 1.44
CLN6-220ENST00000637450 CLEC11AQ9Y240 323 aa24.06■■□□□ 1.44
CLN6-220ENST00000637450 COL4A5P29400 1685 aa24.05■■□□□ 1.44
CLN6-220ENST00000637450 COL13A1Q5TAT6 717 aaPredicted RBP24.05■■□□□ 1.44
CLN6-220ENST00000637450 VPS33BQ9H267 617 aa24.05■■□□□ 1.44
CLN6-220ENST00000637450 DBF4Q9UBU7 674 aaPredicted RBP24.05■■□□□ 1.44
CLN6-220ENST00000637450 GJA3Q9Y6H8 435 aa24.05■■□□□ 1.44
CLN6-220ENST00000637450 SH3TC1Q8TE82 1336 aa24.05■■□□□ 1.44
CLN6-220ENST00000637450 ANKRD13DQ6ZTN6 518 aa24.04■■□□□ 1.44
CLN6-220ENST00000637450 PLBD2Q8NHP8 589 aa24.04■■□□□ 1.44
CLN6-220ENST00000637450 ZNF853P0CG23 659 aa24.03■■□□□ 1.44
CLN6-220ENST00000637450 DUSP27Q5VZP5 1158 aa24.03■■□□□ 1.44
CLN6-220ENST00000637450 SP8Q8IXZ3 490 aa24.03■■□□□ 1.44
CLN6-220ENST00000637450 RTFDC1Q9BY42 306 aaPredicted RBP24.03■■□□□ 1.44
CLN6-220ENST00000637450 MBIPQ9NS73 344 aa24.03■■□□□ 1.44
CLN6-220ENST00000637450 MKRN1Q9UHC7 482 aaKnown RBP24.03■■□□□ 1.44
CLN6-220ENST00000637450 PPIP5K2O43314 1243 aa24.02■■□□□ 1.44
CLN6-220ENST00000637450 HSPA1AP0DMV8 641 aaKnown RBP24.02■■□□□ 1.44
CLN6-220ENST00000637450 HSPA1BP0DMV9 641 aaKnown RBP24.02■■□□□ 1.44
CLN6-220ENST00000637450 DDX46Q7L014 1031 aaKnown RBP24.02■■□□□ 1.44
CLN6-220ENST00000637450 NIM1KQ8IY84 436 aa24.02■■□□□ 1.44
CLN6-220ENST00000637450 APAF1O14727 1248 aa24.01■■□□□ 1.43
CLN6-220ENST00000637450 AOC3Q16853 763 aa24.01■■□□□ 1.43
CLN6-220ENST00000637450 CNTROBQ8N137 903 aa24.01■■□□□ 1.43
CLN6-220ENST00000637450 SUPT20HQ8NEM7 779 aa24.01■■□□□ 1.43
CLN6-220ENST00000637450 ISCA1Q9BUE6 129 aa24.01■■□□□ 1.43
CLN6-220ENST00000637450 HYPKQ9NX55 129 aa24.01■■□□□ 1.43
CLN6-220ENST00000637450 TMEM88BA6NKF7 163 aa24■■□□□ 1.43
CLN6-220ENST00000637450 LMOD1P29536 600 aaPredicted RBP24■■□□□ 1.43
CLN6-220ENST00000637450 SCNN1DP51172 638 aa24■■□□□ 1.43
CLN6-220ENST00000637450 GRAPQ13588 217 aa24■■□□□ 1.43
CLN6-220ENST00000637450 MAP1SQ66K74 1059 aaPredicted RBP24■■□□□ 1.43
CLN6-220ENST00000637450 GRAPLQ8TC17 118 aaPredicted RBP24■■□□□ 1.43
CLN6-220ENST00000637450 EPS15P42566 896 aa23.99■■□□□ 1.43
CLN6-220ENST00000637450 DPP8Q6V1X1 898 aaPredicted RBP23.99■■□□□ 1.43
CLN6-220ENST00000637450 MPNDQ8N594 471 aa23.99■■□□□ 1.43
CLN6-220ENST00000637450 ZNF428Q96B54 188 aa23.99■■□□□ 1.43
CLN6-220ENST00000637450 CNTNAP1P78357 1384 aa23.99■■□□□ 1.43
CLN6-220ENST00000637450 IFT57Q9NWB7 429 aa23.98■■□□□ 1.43
CLN6-220ENST00000637450 ZNRF3Q9ULT6 936 aa23.98■■□□□ 1.43
CLN6-220ENST00000637450 ADAMTSL1Q8N6G6 1762 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms