RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 MRPS27Q92552 414 aaKnown RBP6.99□□□□□ -1.29
SCN2A-213ENST00000636769 FBXO3Q9UK99 471 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 LRCH2Q5VUJ6 765 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 ELP1O95163 1332 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 IL16Q14005 1332 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 MPHOSPH10O00566 681 aaKnown RBP6.99□□□□□ -1.29
SCN2A-213ENST00000636769 NDUFAB1O14561 156 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 RAD21O60216 631 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 AKR1B10O60218 316 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 EVCP57679 992 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 NFE2L2Q16236 605 aa6.99□□□□□ -1.29
SCN2A-213ENST00000636769 ATP8B1O43520 1251 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 F13A1P00488 732 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 ALDH3A1P30838 453 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 PPP2R3AQ06190 1150 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 KLHL10Q6JEL2 608 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 LMBR1Q8WVP7 490 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 MPHOSPH8Q99549 860 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 ZSWIM4Q9H7M6 989 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 RIOK3O14730 519 aaKnown RBP6.98□□□□□ -1.29
SCN2A-213ENST00000636769 N4BP3O15049 544 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 NUCB1Q02818 461 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 CPLX3Q8WVH0 158 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 CFAP58Q5T655 872 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 SREK1Q8WXA9 508 aaKnown RBP6.98□□□□□ -1.29
SCN2A-213ENST00000636769 SSH1Q8WYL5 1049 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 GTF3C6Q969F1 213 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 PPP1R9BQ96SB3 815 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 NAP1L3Q99457 506 aaPredicted RBP6.98□□□□□ -1.29
SCN2A-213ENST00000636769 SLC8A1P32418 973 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 TMPOP42166 694 aaKnown RBP6.98□□□□□ -1.29
SCN2A-213ENST00000636769 PPFIA1Q13136 1202 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 ZSCAN26Q16670 478 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 PLEKHO1Q53GL0 409 aaPredicted RBP6.98□□□□□ -1.29
SCN2A-213ENST00000636769 RAPGEF4Q8WZA2 1011 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 ZFP91Q96JP5 570 aaPredicted RBP6.98□□□□□ -1.29
SCN2A-213ENST00000636769 GDPD2Q9HCC8 539 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 PTGS1P23219 599 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 GBP1P32455 592 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 MTIF2P46199 727 aaKnown RBP6.98□□□□□ -1.29
SCN2A-213ENST00000636769 RBBP5Q15291 538 aaKnown RBP6.98□□□□□ -1.29
SCN2A-213ENST00000636769 ANKRD24Q8TF21 1146 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 IMPACTQ9P2X3 320 aa6.98□□□□□ -1.29
SCN2A-213ENST00000636769 CETN1Q12798 172 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 TOPBP1Q92547 1522 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 PTPRCP08575 1304 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 ATP2C2O75185 946 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 GOLGA5Q8TBA6 731 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 EVI5LQ96CN4 794 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 MYO1BO43795 1136 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 PPFIA4O75335 1185 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 U2AF2P26368 475 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCN2A-213ENST00000636769 TNNC1P63316 161 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 BRD3Q15059 726 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 SYT10Q6XYQ8 523 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 CNGA4Q8IV77 575 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 ATP5DP30049 168 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 KIF5AQ12840 1032 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 WHAMMP3Q1A5X7 153 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 WWC2Q6AWC2 1192 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 RPGRIP1Q96KN7 1286 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 HOMER2Q9NSB8 354 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 CCDC160A6NGH7 325 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 BUB1BO60566 1050 aaPredicted RBP6.97□□□□□ -1.29
SCN2A-213ENST00000636769 PCK1P35558 622 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 SYKP43405 635 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 SUDS3Q9H7L9 328 aaPredicted RBP6.97□□□□□ -1.29
SCN2A-213ENST00000636769 SPATS2LQ9NUQ6 558 aaKnown RBP6.97□□□□□ -1.29
SCN2A-213ENST00000636769 DACT1Q9NYF0 836 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 MRVI1Q9Y6F6 885 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 IKBKGQ9Y6K9 419 aa6.97□□□□□ -1.29
SCN2A-213ENST00000636769 TROQ12816 1431 aaPredicted RBP6.97□□□□□ -1.29
SCN2A-213ENST00000636769 A0A1W2PRG0 241 aa6.96□□□□□ -1.29
SCN2A-213ENST00000636769 IGSF3O75054 1194 aa6.96□□□□□ -1.29
SCN2A-213ENST00000636769 ZHX3Q9H4I2 956 aa6.96□□□□□ -1.29
SCN2A-213ENST00000636769 LUC7L3O95232 432 aaKnown RBP6.96□□□□□ -1.29
SCN2A-213ENST00000636769 TSGA10Q9BZW7 698 aa6.96□□□□□ -1.29
SCN2A-213ENST00000636769 AKAP2Q9Y2D5 859 aa6.96□□□□□ -1.29
SCN2A-213ENST00000636769 PAXIP1Q6ZW49 1069 aaPredicted RBP6.96□□□□□ -1.3
SCN2A-213ENST00000636769 STMN2Q93045 179 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 DNAI2Q9GZS0 605 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 TTF2Q9UNY4 1162 aaKnown RBP6.96□□□□□ -1.3
SCN2A-213ENST00000636769 ZMYM3Q14202 1370 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 FERP16591 822 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 TRIM21P19474 475 aaKnown RBP6.96□□□□□ -1.3
SCN2A-213ENST00000636769 CCDC174Q6PII3 467 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 CEP128Q6ZU80 1094 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 VCX3BQ9H321 246 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 CEP126Q9P2H0 1117 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 MAP3K1Q13233 1512 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 GOLGA6CA6NDK9 693 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 ATP2A1O14983 1001 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 ZEB2O60315 1214 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 GOLGA6DP0CG33 693 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 TMEM266Q2M3C6 531 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 ZNF692Q9BU19 519 aaPredicted RBP6.96□□□□□ -1.3
SCN2A-213ENST00000636769 DNAJC25Q9H1X3 360 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 IL1RAPL2Q9NP60 686 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 GOLGA6AQ9NYA3 693 aa6.96□□□□□ -1.3
SCN2A-213ENST00000636769 BICRAQ9NZM4 1560 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms