RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	CTC1	Q2NKJ3	1217 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	ANKRD24	Q8TF21	1146 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	POLK	Q9UBT6	870 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	SPDYE5	A6NIY4	337 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	HSP90AB1	P08238	724 aa	Known RBP	4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	IL2RB	P14784	551 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	LOR	P23490	312 aa	Predicted RBP	4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	SLC19A1	P41440	591 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	PTGDR	Q13258	359 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	AMOT	Q4VCS5	1084 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	LCE2C	Q5TA81	110 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	CABLES1	Q8TDN4	633 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	GGNBP2	Q9H3C7	697 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	POLR3E	Q9NVU0	708 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	SBF2	Q86WG5	1849 aa		4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	SOCS7	O14512	581 aa		4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	ST8SIA5	O15466	376 aa		4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	ZC3H6	P61129	1189 aa	Known RBP	4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	FAM196A	Q6ZSG2	479 aa		4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	NGEF	Q8N5V2	710 aa		4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	NKX2-3	Q8TAU0	364 aa		4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	PCDH11X	Q9BZA7	1347 aa		4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	PCDH11Y	Q9BZA8	1340 aa		4.79	□□□□□ -1.64
LGI1-222	ENST00000636754	RNF40	O75150	1001 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	IGHA1	P01876	353 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	TOM1L2	Q6ZVM7	507 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	KRT27	Q7Z3Y8	459 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	DDX12P	Q92771	950 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	SNRK	Q9NRH2	765 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	NUDC	Q9Y266	331 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	PAPPA	Q13219	1627 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754		E9PSI1	815 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	HTATSF1	O43719	755 aa	Known RBP	4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	TAT	P17735	454 aa	Predicted RBP	4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	SSTR3	P32745	418 aa	Predicted RBP	4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	IL13	P35225	146 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	PRIM1	P49642	420 aa	Known RBP	4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	LARP1	Q6PKG0	1096 aa	Known RBP	4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	SEPT12	Q8IYM1	358 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	SPG7	Q9UQ90	795 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	MEGF6	O75095	1541 aa		4.78	□□□□□ -1.64
LGI1-222	ENST00000636754	DIAPH1	O60610	1272 aa	Known RBP	4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	AVP	P01185	164 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	CSB-PGBD3	P0DP91	1061 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	PPP2R1A	P30153	589 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	SMCP	P49901	116 aa	Predicted RBP	4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	SPRYD7	Q5W111	196 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	TMEM151A	Q8N4L1	468 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	PHOX2B	Q99453	314 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	BEGAIN	Q9BUH8	593 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	GMPR2	Q9P2T1	348 aa	Known RBP	4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	RGPD2	P0DJD1	1756 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	SCN11A	Q9UI33	1791 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	LY75	O60449	1722 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	EXOC5	O00471	708 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	CLCN1	P35523	988 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	MDM2	Q00987	491 aa	Predicted RBP	4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	EIF4A2	Q14240	407 aa	Known RBP	4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	CHRNA2	Q15822	529 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	DDB1	Q16531	1140 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	NUTM2G	Q5VZR2	741 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	RAPGEF4	Q8WZA2	1011 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	GPCPD1	Q9NPB8	672 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	TSKS	Q9UJT2	592 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	C5	P01031	1676 aa		4.77	□□□□□ -1.65
LGI1-222	ENST00000636754	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	BABAM1	Q9NWV8	329 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	EMILIN1	Q9Y6C2	1016 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	DOT1L	Q8TEK3	1739 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	SIPA1L3	O60292	1781 aa	Predicted RBP	4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	COL24A1	Q17RW2	1714 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	ERVV-2	B6SEH9	535 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	SMAP	O00193	183 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	PLSCR1	O15162	318 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	GDF9	O60383	454 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	COPS2	P61201	443 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	PDE3B	Q13370	1112 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	GAS2L2	Q8NHY3	880 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	ZCRB1	Q8TBF4	217 aa	Known RBP	4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	CALR3	Q96L12	384 aa	Known RBP	4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	NLRP2	Q9NX02	1062 aa		4.76	□□□□□ -1.65
LGI1-222	ENST00000636754	NUP188	Q5SRE5	1749 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	MTHFS	P49914	203 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	APLP1	P51693	650 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	RRS1	Q15050	365 aa	Known RBP	4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	HSP90AB2P	Q58FF8	381 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	NBPF6	Q5VWK0	638 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	NBPF4	Q96M43	638 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	EYA1	Q99502	592 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	GDPD2	Q9HCC8	539 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	STRN4	Q9NRL3	753 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	TOGARAM1	Q9Y4F4	1720 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	UBR2	Q8IWV8	1755 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	MAP3K5	Q99683	1374 aa		4.75	□□□□□ -1.65
LGI1-222	ENST00000636754	BTBD11	A6QL63	1104 aa		4.74	□□□□□ -1.65
LGI1-222	ENST00000636754	CCER2	I3L3R5	266 aa		4.74	□□□□□ -1.65
LGI1-222	ENST00000636754	RFC5	P40937	340 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms