RNA–Protein interactions for RNA: ENST00000636146.1

SYNGAP1-212, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-212ENST00000636146 NEFLP07196 543 aa10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 CT47B1P0C2W7 299 aaPredicted RBP10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 EIF2S2P20042 333 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 IARSP41252 1262 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 EIF6P56537 245 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 CC2D2BQ6DHV5 1058 aa10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 PPP1R42Q7Z4L9 355 aa10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 NUTM1Q86Y26 1132 aa10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 SYNE4Q8N205 404 aa10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 RBM17Q96I25 401 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 MKRN1Q9UHC7 482 aaKnown RBP10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 GJA3Q9Y6H8 435 aa10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 MAP3K15Q6ZN16 1313 aa10.23□□□□□ -0.77
SYNGAP1-212ENST00000636146 POTECB2RU33 542 aa10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 TCERG1O14776 1098 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 HSPA1AP0DMV8 641 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 HSPA1BP0DMV9 641 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 RIPK4P57078 832 aa10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 EIF4A1P60842 406 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 SLFN5Q08AF3 891 aa10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 GRIPAP1Q4V328 841 aa10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 COL13A1Q5TAT6 717 aaPredicted RBP10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 PNMA8AQ86V59 439 aaPredicted RBP10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 TRMT2AQ8IZ69 625 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 AIDAQ96BJ3 306 aa10.22□□□□□ -0.77
SYNGAP1-212ENST00000636146 KLRG2A4D1S0 409 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-212ENST00000636146 EPHX2P34913 555 aa10.21□□□□□ -0.77
SYNGAP1-212ENST00000636146 DUSP27Q5VZP5 1158 aa10.21□□□□□ -0.77
SYNGAP1-212ENST00000636146 TTLL7Q6ZT98 887 aa10.21□□□□□ -0.77
SYNGAP1-212ENST00000636146 LARGE2Q8N3Y3 721 aa10.21□□□□□ -0.77
SYNGAP1-212ENST00000636146 NLRP3Q96P20 1036 aa10.21□□□□□ -0.77
SYNGAP1-212ENST00000636146 TAF1DQ9H5J8 278 aaPredicted RBP10.21□□□□□ -0.77
SYNGAP1-212ENST00000636146 LAMB4A4D0S4 1761 aa10.21□□□□□ -0.78
SYNGAP1-212ENST00000636146 ARFGEF2Q9Y6D5 1785 aa10.21□□□□□ -0.78
SYNGAP1-212ENST00000636146 TMEM88BA6NKF7 163 aa10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 PPEF1O14829 653 aaPredicted RBP10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 ERBB4Q15303 1308 aa10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 NEUROD2Q15784 382 aa10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 PARP10Q53GL7 1025 aa10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 ERICH6BQ5W0A0 696 aa10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 OLFM4Q6UX06 510 aa10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 GPC2Q8N158 579 aa10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 C7orf43Q8WVR3 580 aa10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 SALL2Q9Y467 1007 aaPredicted RBP10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 LAS1LQ9Y4W2 734 aaKnown RBP10.2□□□□□ -0.78
SYNGAP1-212ENST00000636146 RNF123Q5XPI4 1314 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 ZNF541Q9H0D2 1346 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 POTEJP0CG39 1038 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 GNAI1P63096 354 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 AIMP1Q12904 312 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 HSP90AB3PQ58FF7 597 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 SUSD4Q5VX71 490 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 NIM1KQ8IY84 436 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 NECTIN2Q92692 538 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 ZNF428Q96B54 188 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 PSMD1Q99460 953 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 UTP14AQ9BVJ6 771 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 IFT57Q9NWB7 429 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 TRIM35Q9UPQ4 493 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 SCN4AP35499 1836 aa10.19□□□□□ -0.78
SYNGAP1-212ENST00000636146 GIGYF2Q6Y7W6 1299 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-212ENST00000636146 PAXIP1Q6ZW49 1069 aaPredicted RBP10.18□□□□□ -0.78
SYNGAP1-212ENST00000636146 CNTROBQ8N137 903 aa10.18□□□□□ -0.78
SYNGAP1-212ENST00000636146 SUPT20HQ8NEM7 779 aa10.18□□□□□ -0.78
SYNGAP1-212ENST00000636146 CRAMP1Q96RY5 1269 aa10.18□□□□□ -0.78
SYNGAP1-212ENST00000636146 BABAM1Q9NWV8 329 aa10.18□□□□□ -0.78
SYNGAP1-212ENST00000636146 RCAN3Q9UKA8 241 aa10.18□□□□□ -0.78
SYNGAP1-212ENST00000636146 ABT1Q9ULW3 272 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-212ENST00000636146 ABCC12Q96J65 1359 aa10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 IBTKQ9P2D0 1353 aaPredicted RBP10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 KDM3BQ7LBC6 1761 aa10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 FZD9O00144 591 aa10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 PPIP5K2O43314 1243 aa10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 CRY2Q49AN0 593 aa10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 MAP1SQ66K74 1059 aaPredicted RBP10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 ZNF34Q8IZ26 560 aa10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 CDCA7LQ96GN5 454 aa10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 NUP98P52948 1817 aa10.17□□□□□ -0.78
SYNGAP1-212ENST00000636146 UBN2Q6ZU65 1347 aa10.16□□□□□ -0.78
SYNGAP1-212ENST00000636146 HOXA10P31260 410 aaPredicted RBP10.16□□□□□ -0.78
SYNGAP1-212ENST00000636146 DEFB115Q30KQ5 88 aa10.16□□□□□ -0.78
SYNGAP1-212ENST00000636146 DDX46Q7L014 1031 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-212ENST00000636146 COPS6Q7L5N1 327 aa10.16□□□□□ -0.78
SYNGAP1-212ENST00000636146 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
SYNGAP1-212ENST00000636146 BEGAINQ9BUH8 593 aa10.16□□□□□ -0.78
SYNGAP1-212ENST00000636146 TRMT112Q9UI30 125 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-212ENST00000636146 CNTNAP1P78357 1384 aa10.15□□□□□ -0.78
SYNGAP1-212ENST00000636146 FANCIQ9NVI1 1328 aa10.15□□□□□ -0.78
SYNGAP1-212ENST00000636146 NTSR2O95665 410 aa10.15□□□□□ -0.78
SYNGAP1-212ENST00000636146 ANXA1P04083 346 aa10.15□□□□□ -0.78
SYNGAP1-212ENST00000636146 GRM1Q13255 1194 aa10.15□□□□□ -0.78
SYNGAP1-212ENST00000636146 DPP8Q6V1X1 898 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-212ENST00000636146 BCL2L13Q9BXK5 485 aa10.15□□□□□ -0.78
SYNGAP1-212ENST00000636146 ATP6V0A2Q9Y487 856 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms