RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
CACNA1A-222ENST00000636022 HOXA10P31260 410 aaPredicted RBP9.6□□□□□ -0.87
CACNA1A-222ENST00000636022 CCDC93Q567U6 631 aa9.6□□□□□ -0.87
CACNA1A-222ENST00000636022 SUSD4Q5VX71 490 aa9.6□□□□□ -0.87
CACNA1A-222ENST00000636022 NTSR2O95665 410 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 ANXA1P04083 346 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 ALDH1B1P30837 517 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 HTRA3P83110 453 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 FKBP4Q02790 459 aaKnown RBP eCLIP9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 WDR43Q15061 677 aaKnown RBP eCLIP9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 NEUROD2Q15784 382 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 KRT24Q2M2I5 525 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 DPY19L2Q6NUT2 758 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 C3orf67Q6ZVT6 689 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 RTKN2Q8IZC4 609 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
CACNA1A-222ENST00000636022 DDNO94850 711 aaPredicted RBP9.58□□□□□ -0.88
CACNA1A-222ENST00000636022 PARP10Q53GL7 1025 aa9.58□□□□□ -0.88
CACNA1A-222ENST00000636022 SLC10A5Q5PT55 438 aa9.58□□□□□ -0.88
CACNA1A-222ENST00000636022 SPINK5Q9NQ38 1064 aaPredicted RBP9.58□□□□□ -0.88
CACNA1A-222ENST00000636022 DDX21Q9NR30 783 aaKnown RBP eCLIP9.58□□□□□ -0.88
CACNA1A-222ENST00000636022 ZNF277Q9NRM2 450 aaPredicted RBP9.58□□□□□ -0.88
CACNA1A-222ENST00000636022 ANKRD36CQ5JPF3 1778 aa9.58□□□□□ -0.88
CACNA1A-222ENST00000636022 COPS6Q7L5N1 327 aa9.57□□□□□ -0.88
CACNA1A-222ENST00000636022 PPP1R42Q7Z4L9 355 aa9.57□□□□□ -0.88
CACNA1A-222ENST00000636022 XAGE3Q8WTP9 111 aa9.57□□□□□ -0.88
CACNA1A-222ENST00000636022 L3MBTL3Q96JM7 780 aaPredicted RBP9.57□□□□□ -0.88
CACNA1A-222ENST00000636022 PSMD1Q99460 953 aa9.57□□□□□ -0.88
CACNA1A-222ENST00000636022 SCN4AP35499 1836 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 FZD9O00144 591 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 HOXB7P09629 217 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 ZNF853P0CG23 659 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 CC2D2BQ6DHV5 1058 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 SLC51AQ86UW1 340 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 SYNE4Q8N205 404 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 NECTIN2Q92692 538 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 RPGRQ92834 1020 aaKnown RBP9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 KLRG1Q96E93 195 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 CFAP44Q96MT7 982 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 CRAMP1Q96RY5 1269 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 UTP14AQ9BVJ6 771 aaKnown RBP9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 FOXD4L1Q9NU39 408 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 LAS1LQ9Y4W2 734 aaKnown RBP9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 RNF123Q5XPI4 1314 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 ZNF541Q9H0D2 1346 aa9.56□□□□□ -0.88
CACNA1A-222ENST00000636022 LAMB2P55268 1798 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 COL4A5P29400 1685 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 POTEIP0CG38 1075 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 POTEJP0CG39 1038 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 IARSP41252 1262 aaKnown RBP9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 AIMP1Q12904 312 aaKnown RBP9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 TCIRG1Q13488 830 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 NLRP10Q86W26 655 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 JMYQ8N9B5 988 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 RBM17Q96I25 401 aaKnown RBP9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 NLRP3Q96P20 1036 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 MBIPQ9NS73 344 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 CHPF2Q9P2E5 772 aa9.55□□□□□ -0.88
CACNA1A-222ENST00000636022 APAF1O14727 1248 aa9.54□□□□□ -0.88
CACNA1A-222ENST00000636022 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
CACNA1A-222ENST00000636022 HSP90AB3PQ58FF7 597 aa9.54□□□□□ -0.88
CACNA1A-222ENST00000636022 HDGFL1Q5TGJ6 251 aa9.54□□□□□ -0.88
CACNA1A-222ENST00000636022 CHADLQ6NUI6 762 aa9.54□□□□□ -0.88
CACNA1A-222ENST00000636022 TAF1DQ9H5J8 278 aaPredicted RBP9.54□□□□□ -0.88
CACNA1A-222ENST00000636022 TAF1P21675 1872 aa9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 IQCA1LA6NCM1 817 aa9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 HCLS1P14317 486 aaPredicted RBP9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 DUSP27Q5VZP5 1158 aa9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 PLBD2Q8NHP8 589 aa9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 DBF4Q9UBU7 674 aaPredicted RBP9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 ATP6V0A2Q9Y487 856 aa9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 ABCC4O15439 1325 aa9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
CACNA1A-222ENST00000636022 ADAMTSL1Q8N6G6 1762 aa9.52□□□□□ -0.88
CACNA1A-222ENST00000636022 TCERG1O14776 1098 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-222ENST00000636022 CCDC184Q52MB2 194 aa9.52□□□□□ -0.89
CACNA1A-222ENST00000636022 ANKRD13DQ6ZTN6 518 aa9.52□□□□□ -0.89
CACNA1A-222ENST00000636022 DDX60Q8IY21 1712 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-222ENST00000636022 GPC2Q8N158 579 aa9.52□□□□□ -0.89
CACNA1A-222ENST00000636022 ISCA1Q9BUE6 129 aa9.52□□□□□ -0.89
CACNA1A-222ENST00000636022 IFT57Q9NWB7 429 aa9.52□□□□□ -0.89
CACNA1A-222ENST00000636022 HYPKQ9NX55 129 aa9.52□□□□□ -0.89
CACNA1A-222ENST00000636022 TRMT112Q9UI30 125 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-222ENST00000636022 BBOX1O75936 387 aa9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 ITGBL1O95965 494 aaPredicted RBP9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 DSG3P32926 999 aa9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 GNAI1P63096 354 aa9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 TRIM28Q13263 835 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 LDHDQ86WU2 507 aa9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 JDP2Q8WYK2 163 aa9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 RTFDC1Q9BY42 306 aaPredicted RBP9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 HACL1Q9UJ83 578 aa9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 PASKQ96RG2 1323 aa9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 LTBP1Q14766 1721 aa9.51□□□□□ -0.89
CACNA1A-222ENST00000636022 EPHX2P34913 555 aa9.5□□□□□ -0.89
CACNA1A-222ENST00000636022 CALD1Q05682 793 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-222ENST00000636022 SP8Q8IXZ3 490 aa9.5□□□□□ -0.89
CACNA1A-222ENST00000636022 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms