RNA–Protein interactions for RNA: ENST00000635722.1

CHRNA7-204, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-204ENST00000635722 SUSD4Q5VX71 490 aa27.6■■■□□ 2.01
CHRNA7-204ENST00000635722 MAP1SQ66K74 1059 aaPredicted RBP27.6■■■□□ 2.01
CHRNA7-204ENST00000635722 NYXQ9GZU5 481 aa27.6■■■□□ 2.01
CHRNA7-204ENST00000635722 IBTKQ9P2D0 1353 aaPredicted RBP27.6■■■□□ 2.01
CHRNA7-204ENST00000635722 PNISRQ8TF01 805 aaKnown RBP27.59■■■□□ 2.01
CHRNA7-204ENST00000635722 CLEC11AQ9Y240 323 aa27.59■■■□□ 2.01
CHRNA7-204ENST00000635722 TCERG1O14776 1098 aaKnown RBP27.58■■■□□ 2.01
CHRNA7-204ENST00000635722 VEGFBP49765 207 aa27.58■■■□□ 2.01
CHRNA7-204ENST00000635722 PSMD1Q99460 953 aa27.58■■■□□ 2.01
CHRNA7-204ENST00000635722 TMEM88BA6NKF7 163 aa27.57■■■□□ 2
CHRNA7-204ENST00000635722 NTSR2O95665 410 aa27.57■■■□□ 2
CHRNA7-204ENST00000635722 RPGRQ92834 1020 aaKnown RBP27.57■■■□□ 2
CHRNA7-204ENST00000635722 LAMB2P55268 1798 aa27.57■■■□□ 2
CHRNA7-204ENST00000635722 NEFMP07197 916 aa27.56■■■□□ 2
CHRNA7-204ENST00000635722 GJA3Q9Y6H8 435 aa27.56■■■□□ 2
CHRNA7-204ENST00000635722 ANXA1P04083 346 aa27.55■■■□□ 2
CHRNA7-204ENST00000635722 HOXA10P31260 410 aaPredicted RBP27.55■■■□□ 2
CHRNA7-204ENST00000635722 PROSER3Q2NL68 480 aa27.55■■■□□ 2
CHRNA7-204ENST00000635722 ZNF34Q8IZ26 560 aa27.55■■■□□ 2
CHRNA7-204ENST00000635722 GPC2Q8N158 579 aa27.55■■■□□ 2
CHRNA7-204ENST00000635722 ANKRD36CQ5JPF3 1778 aa27.55■■■□□ 2
CHRNA7-204ENST00000635722 LRP10Q7Z4F1 713 aa27.54■■■□□ 2
CHRNA7-204ENST00000635722 MAPK8IP3Q9UPT6 1336 aa27.53■■■□□ 2
CHRNA7-204ENST00000635722 PPEF1O14829 653 aaPredicted RBP27.53■■■□□ 2
CHRNA7-204ENST00000635722 FMR1Q06787 632 aaKnown RBP eCLIP27.53■■■□□ 2
CHRNA7-204ENST00000635722 JDP2Q8WYK2 163 aa27.53■■■□□ 2
CHRNA7-204ENST00000635722 CNTROBQ8N137 903 aa27.52■■■□□ 2
CHRNA7-204ENST00000635722 SCNN1DP51172 638 aa27.51■■□□□ 1.99
CHRNA7-204ENST00000635722 PDIA6Q15084 440 aa27.51■■□□□ 1.99
CHRNA7-204ENST00000635722 GIGYF2Q6Y7W6 1299 aaKnown RBP27.51■■□□□ 1.99
CHRNA7-204ENST00000635722 TSPYL4Q9UJ04 414 aa27.51■■□□□ 1.99
CHRNA7-204ENST00000635722 PNMA8AQ86V59 439 aaPredicted RBP27.5■■□□□ 1.99
CHRNA7-204ENST00000635722 LARGE2Q8N3Y3 721 aa27.5■■□□□ 1.99
CHRNA7-204ENST00000635722 EIF2S2P20042 333 aaKnown RBP27.49■■□□□ 1.99
CHRNA7-204ENST00000635722 EPS15P42566 896 aa27.49■■□□□ 1.99
CHRNA7-204ENST00000635722 EIF6P56537 245 aaKnown RBP27.49■■□□□ 1.99
CHRNA7-204ENST00000635722 CRAMP1Q96RY5 1269 aa27.49■■□□□ 1.99
CHRNA7-204ENST00000635722 ERBB4Q15303 1308 aa27.48■■□□□ 1.99
CHRNA7-204ENST00000635722 CC2D2BQ6DHV5 1058 aa27.48■■□□□ 1.99
CHRNA7-204ENST00000635722 RBM17Q96I25 401 aaKnown RBP27.48■■□□□ 1.99
CHRNA7-204ENST00000635722 TAF1P21675 1872 aa27.48■■□□□ 1.99
CHRNA7-204ENST00000635722 NECTIN2Q92692 538 aa27.47■■□□□ 1.99
CHRNA7-204ENST00000635722 THSD7BQ9C0I4 1608 aa27.47■■□□□ 1.99
CHRNA7-204ENST00000635722 ABCC4O15439 1325 aa27.46■■□□□ 1.99
CHRNA7-204ENST00000635722 RASSF10A6NK89 507 aa27.46■■□□□ 1.99
CHRNA7-204ENST00000635722 AOC3Q16853 763 aa27.46■■□□□ 1.99
CHRNA7-204ENST00000635722 ZNF428Q96B54 188 aa27.46■■□□□ 1.99
CHRNA7-204ENST00000635722 TRPM7Q96QT4 1865 aa27.44■■□□□ 1.98
CHRNA7-204ENST00000635722 TRAF5O00463 557 aa27.44■■□□□ 1.98
CHRNA7-204ENST00000635722 PPIP5K2O43314 1243 aa27.44■■□□□ 1.98
CHRNA7-204ENST00000635722 LMOD1P29536 600 aaPredicted RBP27.44■■□□□ 1.98
CHRNA7-204ENST00000635722 PPP1R42Q7Z4L9 355 aa27.44■■□□□ 1.98
CHRNA7-204ENST00000635722 AIDAQ96BJ3 306 aa27.44■■□□□ 1.98
CHRNA7-204ENST00000635722 DDX21Q9NR30 783 aaKnown RBP eCLIP27.44■■□□□ 1.98
CHRNA7-204ENST00000635722 WBP1LQ9NX94 342 aa27.44■■□□□ 1.98
CHRNA7-204ENST00000635722 ABT1Q9ULW3 272 aaKnown RBP27.44■■□□□ 1.98
CHRNA7-204ENST00000635722 RIPK4P57078 832 aa27.43■■□□□ 1.98
CHRNA7-204ENST00000635722 KRT24Q2M2I5 525 aa27.43■■□□□ 1.98
CHRNA7-204ENST00000635722 PARP10Q53GL7 1025 aa27.43■■□□□ 1.98
CHRNA7-204ENST00000635722 NIM1KQ8IY84 436 aa27.43■■□□□ 1.98
CHRNA7-204ENST00000635722 UTP14AQ9BVJ6 771 aaKnown RBP27.43■■□□□ 1.98
CHRNA7-204ENST00000635722 CTCFP49711 727 aaPredicted RBP27.42■■□□□ 1.98
CHRNA7-204ENST00000635722 LBX1P52954 281 aa27.42■■□□□ 1.98
CHRNA7-204ENST00000635722 DEFB115Q30KQ5 88 aa27.42■■□□□ 1.98
CHRNA7-204ENST00000635722 DUOX1Q9NRD9 1551 aa27.42■■□□□ 1.98
CHRNA7-204ENST00000635722 COL4A1P02462 1669 aa27.41■■□□□ 1.98
CHRNA7-204ENST00000635722 HCLS1P14317 486 aaPredicted RBP27.41■■□□□ 1.98
CHRNA7-204ENST00000635722 NLRP3Q96P20 1036 aa27.41■■□□□ 1.98
CHRNA7-204ENST00000635722 PRDM10Q9NQV6 1147 aa27.41■■□□□ 1.98
CHRNA7-204ENST00000635722 ATP6V0A2Q9Y487 856 aa27.41■■□□□ 1.98
CHRNA7-204ENST00000635722 DDX60Q8IY21 1712 aaKnown RBP27.41■■□□□ 1.98
CHRNA7-204ENST00000635722 WDR33Q9C0J8 1336 aaKnown RBP27.41■■□□□ 1.98
CHRNA7-204ENST00000635722 AIMP1Q12904 312 aaKnown RBP27.4■■□□□ 1.98
CHRNA7-204ENST00000635722 XAGE3Q8WTP9 111 aa27.4■■□□□ 1.98
CHRNA7-204ENST00000635722 HSPA8P11142 646 aaKnown RBP27.39■■□□□ 1.98
CHRNA7-204ENST00000635722 TMPOP42166 694 aaKnown RBP27.39■■□□□ 1.98
CHRNA7-204ENST00000635722 COPS6Q7L5N1 327 aa27.39■■□□□ 1.98
CHRNA7-204ENST00000635722 LRRC37AA6NMS7 1700 aa27.38■■□□□ 1.97
CHRNA7-204ENST00000635722 SLC10A5Q5PT55 438 aa27.38■■□□□ 1.97
CHRNA7-204ENST00000635722 NLRP10Q86W26 655 aa27.38■■□□□ 1.97
CHRNA7-204ENST00000635722 CCDC146Q8IYE0 955 aa27.38■■□□□ 1.97
CHRNA7-204ENST00000635722 CXCL9Q07325 125 aa27.37■■□□□ 1.97
CHRNA7-204ENST00000635722 GRM1Q13255 1194 aa27.37■■□□□ 1.97
CHRNA7-204ENST00000635722 GRIPAP1Q4V328 841 aa27.37■■□□□ 1.97
CHRNA7-204ENST00000635722 PNNQ9H307 717 aaKnown RBP27.37■■□□□ 1.97
CHRNA7-204ENST00000635722 CST9Q5W186 159 aa27.36■■□□□ 1.97
CHRNA7-204ENST00000635722 GPRC5DQ9NZD1 345 aa27.36■■□□□ 1.97
CHRNA7-204ENST00000635722 GMPSP49915 693 aaPredicted RBP27.35■■□□□ 1.97
CHRNA7-204ENST00000635722 CYP4F22Q6NT55 531 aa27.35■■□□□ 1.97
CHRNA7-204ENST00000635722 PAXIP1Q6ZW49 1069 aaPredicted RBP27.35■■□□□ 1.97
CHRNA7-204ENST00000635722 USP50Q70EL3 339 aaPredicted RBP27.35■■□□□ 1.97
CHRNA7-204ENST00000635722 NEUROD2Q15784 382 aa27.34■■□□□ 1.97
CHRNA7-204ENST00000635722 CAPNS2Q96L46 248 aa27.34■■□□□ 1.97
CHRNA7-204ENST00000635722 RTFDC1Q9BY42 306 aaPredicted RBP27.34■■□□□ 1.97
CHRNA7-204ENST00000635722 SHTN1A0MZ66 631 aa27.33■■□□□ 1.97
CHRNA7-204ENST00000635722 DPP8Q6V1X1 898 aaPredicted RBP27.33■■□□□ 1.97
CHRNA7-204ENST00000635722 ZNRF3Q9ULT6 936 aa27.33■■□□□ 1.97
CHRNA7-204ENST00000635722 RAD17O75943 681 aa27.32■■□□□ 1.96
CHRNA7-204ENST00000635722 ADARB2Q9NS39 739 aaKnown RBP27.32■■□□□ 1.96
CHRNA7-204ENST00000635722 CHPF2Q9P2E5 772 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms