RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
SOX2-OT-247ENST00000628347 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
SOX2-OT-247ENST00000628347 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
SOX2-OT-247ENST00000628347 OLFM4Q6UX06 510 aa16.32■□□□□ 0.2
SOX2-OT-247ENST00000628347 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
SOX2-OT-247ENST00000628347 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-247ENST00000628347 TRIM35Q9UPQ4 493 aa16.32■□□□□ 0.2
SOX2-OT-247ENST00000628347 ANKRD36CQ5JPF3 1778 aa16.31■□□□□ 0.2
SOX2-OT-247ENST00000628347 IQCA1LA6NCM1 817 aa16.31■□□□□ 0.2
SOX2-OT-247ENST00000628347 IARSP41252 1262 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-247ENST00000628347 PROSER3Q2NL68 480 aa16.31■□□□□ 0.2
SOX2-OT-247ENST00000628347 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
SOX2-OT-247ENST00000628347 RPGRQ92834 1020 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-247ENST00000628347 CRAMP1Q96RY5 1269 aa16.31■□□□□ 0.2
SOX2-OT-247ENST00000628347 FZD9O00144 591 aa16.3■□□□□ 0.2
SOX2-OT-247ENST00000628347 HOXB7P09629 217 aa16.3■□□□□ 0.2
SOX2-OT-247ENST00000628347 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
SOX2-OT-247ENST00000628347 SLC10A5Q5PT55 438 aa16.3■□□□□ 0.2
SOX2-OT-247ENST00000628347 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
SOX2-OT-247ENST00000628347 RBM17Q96I25 401 aaKnown RBP16.3■□□□□ 0.2
SOX2-OT-247ENST00000628347 PRKRIP1Q9H875 184 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-247ENST00000628347 DDX21Q9NR30 783 aaKnown RBP eCLIP16.3■□□□□ 0.2
SOX2-OT-247ENST00000628347 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
SOX2-OT-247ENST00000628347 ANXA1P04083 346 aa16.29■□□□□ 0.2
SOX2-OT-247ENST00000628347 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
SOX2-OT-247ENST00000628347 UTP14AQ9BVJ6 771 aaKnown RBP16.29■□□□□ 0.2
SOX2-OT-247ENST00000628347 ZNF541Q9H0D2 1346 aa16.28■□□□□ 0.2
SOX2-OT-247ENST00000628347 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
SOX2-OT-247ENST00000628347 XAGE3Q8WTP9 111 aa16.28■□□□□ 0.2
SOX2-OT-247ENST00000628347 NLRP3Q96P20 1036 aa16.28■□□□□ 0.2
SOX2-OT-247ENST00000628347 TAF1DQ9H5J8 278 aaPredicted RBP16.28■□□□□ 0.2
SOX2-OT-247ENST00000628347 PCNTO95613 3336 aa16.27■□□□□ 0.2
SOX2-OT-247ENST00000628347 POTEIP0CG38 1075 aa16.27■□□□□ 0.2
SOX2-OT-247ENST00000628347 POTEJP0CG39 1038 aa16.27■□□□□ 0.2
SOX2-OT-247ENST00000628347 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
SOX2-OT-247ENST00000628347 LDHDQ86WU2 507 aa16.27■□□□□ 0.2
SOX2-OT-247ENST00000628347 PPEF1O14829 653 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-247ENST00000628347 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
SOX2-OT-247ENST00000628347 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
SOX2-OT-247ENST00000628347 NLRP10Q86W26 655 aa16.26■□□□□ 0.19
SOX2-OT-247ENST00000628347 CFAP44Q96MT7 982 aa16.26■□□□□ 0.19
SOX2-OT-247ENST00000628347 ADAMTSL1Q8N6G6 1762 aa16.26■□□□□ 0.19
SOX2-OT-247ENST00000628347 COL4A5P29400 1685 aa16.25■□□□□ 0.19
SOX2-OT-247ENST00000628347 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
SOX2-OT-247ENST00000628347 GPC2Q8N158 579 aa16.25■□□□□ 0.19
SOX2-OT-247ENST00000628347 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
SOX2-OT-247ENST00000628347 NECTIN2Q92692 538 aa16.25■□□□□ 0.19
SOX2-OT-247ENST00000628347 HACL1Q9UJ83 578 aa16.25■□□□□ 0.19
SOX2-OT-247ENST00000628347 LAS1LQ9Y4W2 734 aaKnown RBP16.25■□□□□ 0.19
SOX2-OT-247ENST00000628347 LAMB2P55268 1798 aa16.25■□□□□ 0.19
SOX2-OT-247ENST00000628347 PASKQ96RG2 1323 aa16.24■□□□□ 0.19
SOX2-OT-247ENST00000628347 HDGFL1Q5TGJ6 251 aa16.24■□□□□ 0.19
SOX2-OT-247ENST00000628347 VPS33BQ9H267 617 aa16.24■□□□□ 0.19
SOX2-OT-247ENST00000628347 CREBZFQ9NS37 354 aa16.24■□□□□ 0.19
SOX2-OT-247ENST00000628347 CHPF2Q9P2E5 772 aa16.24■□□□□ 0.19
SOX2-OT-247ENST00000628347 ATP6V0A2Q9Y487 856 aa16.24■□□□□ 0.19
SOX2-OT-247ENST00000628347 ABCC4O15439 1325 aa16.23■□□□□ 0.19
SOX2-OT-247ENST00000628347 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
SOX2-OT-247ENST00000628347 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
SOX2-OT-247ENST00000628347 DBF4Q9UBU7 674 aaPredicted RBP16.23■□□□□ 0.19
SOX2-OT-247ENST00000628347 SH3TC1Q8TE82 1336 aa16.22■□□□□ 0.19
SOX2-OT-247ENST00000628347 BBOX1O75936 387 aa16.22■□□□□ 0.19
SOX2-OT-247ENST00000628347 EPHX2P34913 555 aa16.22■□□□□ 0.19
SOX2-OT-247ENST00000628347 EIF6P56537 245 aaKnown RBP16.22■□□□□ 0.19
SOX2-OT-247ENST00000628347 PNMA8AQ86V59 439 aaPredicted RBP16.22■□□□□ 0.19
SOX2-OT-247ENST00000628347 TRMT112Q9UI30 125 aaKnown RBP16.22■□□□□ 0.19
SOX2-OT-247ENST00000628347 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
SOX2-OT-247ENST00000628347 SLC51AQ86UW1 340 aa16.21■□□□□ 0.19
SOX2-OT-247ENST00000628347 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
SOX2-OT-247ENST00000628347 ISCA1Q9BUE6 129 aa16.21■□□□□ 0.19
SOX2-OT-247ENST00000628347 RTFDC1Q9BY42 306 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-247ENST00000628347 TMX4Q9H1E5 349 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-247ENST00000628347 MBIPQ9NS73 344 aa16.21■□□□□ 0.19
SOX2-OT-247ENST00000628347 IFT57Q9NWB7 429 aa16.21■□□□□ 0.19
SOX2-OT-247ENST00000628347 HYPKQ9NX55 129 aa16.21■□□□□ 0.19
SOX2-OT-247ENST00000628347 ITGBL1O95965 494 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-247ENST00000628347 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-247ENST00000628347 CALD1Q05682 793 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-247ENST00000628347 ANKRD13DQ6ZTN6 518 aa16.2■□□□□ 0.18
SOX2-OT-247ENST00000628347 SP8Q8IXZ3 490 aa16.2■□□□□ 0.18
SOX2-OT-247ENST00000628347 SUPT20HQ8NEM7 779 aa16.2■□□□□ 0.18
SOX2-OT-247ENST00000628347 LTBP1Q14766 1721 aa16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 APAF1O14727 1248 aa16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 TCERG1O14776 1098 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 GNAI1P63096 354 aa16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 TRIM28Q13263 835 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 GRAPQ13588 217 aa16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 EAPPQ56P03 285 aaPredicted RBP16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 DDX46Q7L014 1031 aaKnown RBP16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
SOX2-OT-247ENST00000628347 PPIP5K2O43314 1243 aa16.18■□□□□ 0.18
SOX2-OT-247ENST00000628347 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
SOX2-OT-247ENST00000628347 NIM1KQ8IY84 436 aa16.18■□□□□ 0.18
SOX2-OT-247ENST00000628347 LRRC37AA6NMS7 1700 aa16.17■□□□□ 0.18
SOX2-OT-247ENST00000628347 CNTNAP1P78357 1384 aa16.17■□□□□ 0.18
SOX2-OT-247ENST00000628347 LMOD1P29536 600 aaPredicted RBP16.17■□□□□ 0.18
SOX2-OT-247ENST00000628347 SCNN1DP51172 638 aa16.17■□□□□ 0.18
SOX2-OT-247ENST00000628347 AOC3Q16853 763 aa16.17■□□□□ 0.18
SOX2-OT-247ENST00000628347 CLEC11AQ9Y240 323 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms