RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 LAMB2P55268 1798 aa17.77■□□□□ 0.44
SOX2-OT-241ENST00000626948 HOXA10P31260 410 aaPredicted RBP17.77■□□□□ 0.44
SOX2-OT-241ENST00000626948 SYNE4Q8N205 404 aa17.77■□□□□ 0.44
SOX2-OT-241ENST00000626948 KLRG1Q96E93 195 aa17.77■□□□□ 0.44
SOX2-OT-241ENST00000626948 NYXQ9GZU5 481 aa17.77■□□□□ 0.44
SOX2-OT-241ENST00000626948 GTF2E1P29083 439 aaPredicted RBP17.76■□□□□ 0.43
SOX2-OT-241ENST00000626948 ALDH1B1P30837 517 aa17.76■□□□□ 0.43
SOX2-OT-241ENST00000626948 COPS6Q7L5N1 327 aa17.76■□□□□ 0.43
SOX2-OT-241ENST00000626948 LMOD3Q0VAK6 560 aa17.75■□□□□ 0.43
SOX2-OT-241ENST00000626948 JMYQ8N9B5 988 aa17.75■□□□□ 0.43
SOX2-OT-241ENST00000626948 XAGE3Q8WTP9 111 aa17.75■□□□□ 0.43
SOX2-OT-241ENST00000626948 ADAMTSL1Q8N6G6 1762 aa17.74■□□□□ 0.43
SOX2-OT-241ENST00000626948 L3MBTL3Q96JM7 780 aaPredicted RBP17.74■□□□□ 0.43
SOX2-OT-241ENST00000626948 SCN4AP35499 1836 aa17.74■□□□□ 0.43
SOX2-OT-241ENST00000626948 TAF1P21675 1872 aa17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 LTBP1Q14766 1721 aa17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 FZD9O00144 591 aa17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 IARSP41252 1262 aaKnown RBP17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 AIMP1Q12904 312 aaKnown RBP17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 SLC10A5Q5PT55 438 aa17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 RTKN2Q8IZC4 609 aa17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 CHPF2Q9P2E5 772 aa17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 LAS1LQ9Y4W2 734 aaKnown RBP17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 COL4A1P02462 1669 aa17.73■□□□□ 0.43
SOX2-OT-241ENST00000626948 ZNF853P0CG23 659 aa17.72■□□□□ 0.43
SOX2-OT-241ENST00000626948 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
SOX2-OT-241ENST00000626948 PARP10Q53GL7 1025 aa17.72■□□□□ 0.43
SOX2-OT-241ENST00000626948 NLRP10Q86W26 655 aa17.72■□□□□ 0.43
SOX2-OT-241ENST00000626948 CRAMP1Q96RY5 1269 aa17.72■□□□□ 0.43
SOX2-OT-241ENST00000626948 PSMD1Q99460 953 aa17.72■□□□□ 0.43
SOX2-OT-241ENST00000626948 DDX21Q9NR30 783 aaKnown RBP eCLIP17.72■□□□□ 0.43
SOX2-OT-241ENST00000626948 IFFO2Q5TF58 517 aa17.71■□□□□ 0.43
SOX2-OT-241ENST00000626948 TAF1DQ9H5J8 278 aaPredicted RBP17.71■□□□□ 0.43
SOX2-OT-241ENST00000626948 DDX60Q8IY21 1712 aaKnown RBP17.7■□□□□ 0.42
SOX2-OT-241ENST00000626948 TCERG1O14776 1098 aaKnown RBP17.7■□□□□ 0.42
SOX2-OT-241ENST00000626948 TCIRG1Q13488 830 aa17.7■□□□□ 0.42
SOX2-OT-241ENST00000626948 CHADLQ6NUI6 762 aa17.7■□□□□ 0.42
SOX2-OT-241ENST00000626948 PPP1R42Q7Z4L9 355 aa17.7■□□□□ 0.42
SOX2-OT-241ENST00000626948 RPGRQ92834 1020 aaKnown RBP17.7■□□□□ 0.42
SOX2-OT-241ENST00000626948 UTP14AQ9BVJ6 771 aaKnown RBP17.7■□□□□ 0.42
SOX2-OT-241ENST00000626948 MBIPQ9NS73 344 aa17.7■□□□□ 0.42
SOX2-OT-241ENST00000626948 APAF1O14727 1248 aa17.69■□□□□ 0.42
SOX2-OT-241ENST00000626948 HCLS1P14317 486 aaPredicted RBP17.69■□□□□ 0.42
SOX2-OT-241ENST00000626948 CFAP44Q96MT7 982 aa17.69■□□□□ 0.42
SOX2-OT-241ENST00000626948 ABCC4O15439 1325 aa17.69■□□□□ 0.42
SOX2-OT-241ENST00000626948 RNF123Q5XPI4 1314 aa17.69■□□□□ 0.42
SOX2-OT-241ENST00000626948 PPEF1O14829 653 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-241ENST00000626948 RBM17Q96I25 401 aaKnown RBP17.68■□□□□ 0.42
SOX2-OT-241ENST00000626948 PASKQ96RG2 1323 aa17.68■□□□□ 0.42
SOX2-OT-241ENST00000626948 ITGBL1O95965 494 aaPredicted RBP17.67■□□□□ 0.42
SOX2-OT-241ENST00000626948 HDGFL1Q5TGJ6 251 aa17.67■□□□□ 0.42
SOX2-OT-241ENST00000626948 DUSP27Q5VZP5 1158 aa17.67■□□□□ 0.42
SOX2-OT-241ENST00000626948 CC2D2BQ6DHV5 1058 aa17.67■□□□□ 0.42
SOX2-OT-241ENST00000626948 NLRP3Q96P20 1036 aa17.67■□□□□ 0.42
SOX2-OT-241ENST00000626948 DUOX1Q9NRD9 1551 aa17.66■□□□□ 0.42
SOX2-OT-241ENST00000626948 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
SOX2-OT-241ENST00000626948 ATP6V0A2Q9Y487 856 aa17.66■□□□□ 0.42
SOX2-OT-241ENST00000626948 HOXB7P09629 217 aa17.65■□□□□ 0.42
SOX2-OT-241ENST00000626948 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
SOX2-OT-241ENST00000626948 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
SOX2-OT-241ENST00000626948 IQCA1LA6NCM1 817 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 ATP5J2-PTCD1G3V325 749 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 EPHX2P34913 555 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 SCNN1DP51172 638 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 HSP90AB3PQ58FF7 597 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 ANKRD13DQ6ZTN6 518 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 LDHDQ86WU2 507 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 GPC2Q8N158 579 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 HACL1Q9UJ83 578 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 LRRC37AA6NMS7 1700 aa17.64■□□□□ 0.41
SOX2-OT-241ENST00000626948 AOC3Q16853 763 aa17.63■□□□□ 0.41
SOX2-OT-241ENST00000626948 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
SOX2-OT-241ENST00000626948 RTFDC1Q9BY42 306 aaPredicted RBP17.63■□□□□ 0.41
SOX2-OT-241ENST00000626948 DBF4Q9UBU7 674 aaPredicted RBP17.63■□□□□ 0.41
SOX2-OT-241ENST00000626948 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
SOX2-OT-241ENST00000626948 ELL2O00472 640 aaPredicted RBP17.62■□□□□ 0.41
SOX2-OT-241ENST00000626948 EAPPQ56P03 285 aaPredicted RBP17.62■□□□□ 0.41
SOX2-OT-241ENST00000626948 COL13A1Q5TAT6 717 aaPredicted RBP17.62■□□□□ 0.41
SOX2-OT-241ENST00000626948 LARGE2Q8N3Y3 721 aa17.62■□□□□ 0.41
SOX2-OT-241ENST00000626948 JDP2Q8WYK2 163 aa17.62■□□□□ 0.41
SOX2-OT-241ENST00000626948 FAM89AQ96GI7 184 aa17.62■□□□□ 0.41
SOX2-OT-241ENST00000626948 CREBZFQ9NS37 354 aa17.62■□□□□ 0.41
SOX2-OT-241ENST00000626948 IFT57Q9NWB7 429 aa17.62■□□□□ 0.41
SOX2-OT-241ENST00000626948 EPS15P42566 896 aa17.61■□□□□ 0.41
SOX2-OT-241ENST00000626948 FMR1Q06787 632 aaKnown RBP eCLIP17.61■□□□□ 0.41
SOX2-OT-241ENST00000626948 SP8Q8IXZ3 490 aa17.61■□□□□ 0.41
SOX2-OT-241ENST00000626948 TSPYL6Q8N831 410 aa17.61■□□□□ 0.41
SOX2-OT-241ENST00000626948 GJA3Q9Y6H8 435 aa17.61■□□□□ 0.41
SOX2-OT-241ENST00000626948 GRAPQ13588 217 aa17.6■□□□□ 0.41
SOX2-OT-241ENST00000626948 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
SOX2-OT-241ENST00000626948 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
SOX2-OT-241ENST00000626948 MAP1SQ66K74 1059 aaPredicted RBP17.6■□□□□ 0.41
SOX2-OT-241ENST00000626948 GRAPLQ8TC17 118 aaPredicted RBP17.6■□□□□ 0.41
SOX2-OT-241ENST00000626948 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
SOX2-OT-241ENST00000626948 HYPKQ9NX55 129 aa17.6■□□□□ 0.41
SOX2-OT-241ENST00000626948 MKRN1Q9UHC7 482 aaKnown RBP17.6■□□□□ 0.41
SOX2-OT-241ENST00000626948 PPIP5K2O43314 1243 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms