RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 UBR3Q6ZT12 1888 aa9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 SSFA2P28290 1259 aa9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 VSIG10Q8N0Z9 540 aa9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 ARXQ96QS3 562 aa9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 PDGFDQ9GZP0 370 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 MTFR1LQ9H019 292 aa9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 KDM3BQ7LBC6 1761 aa9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 LRP5O75197 1615 aa9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 CICQ96RK0 1608 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-221ENST00000625705 CCER2I3L3R5 266 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 KCNQ3O43525 872 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 SNRPA1P09661 255 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 PTPREP23469 700 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 CANXP27824 592 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 POLD1P28340 1107 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 RFC4P35249 363 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 TRAPPC3LQ5T215 181 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 RC3H1Q5TC82 1133 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 MSL1Q68DK7 614 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 COL23A1Q86Y22 540 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 ZDHHC16Q969W1 377 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 SLC4A9Q96Q91 983 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 ADAM33Q9BZ11 813 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 VPS9D1Q9Y2B5 631 aa9.4□□□□□ -0.9
NPLOC4-221ENST00000625705 LAMB4A4D0S4 1761 aa9.4□□□□□ -0.91
NPLOC4-221ENST00000625705 RPS6KA4O75676 772 aa9.39□□□□□ -0.91
NPLOC4-221ENST00000625705 CYP19A1P11511 503 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-221ENST00000625705 SMIM5Q71RC9 77 aa9.39□□□□□ -0.91
NPLOC4-221ENST00000625705 ZPR1O75312 459 aa9.38□□□□□ -0.91
NPLOC4-221ENST00000625705 SPRYD3Q8NCJ5 442 aa9.38□□□□□ -0.91
NPLOC4-221ENST00000625705 KCTD12Q96CX2 325 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-221ENST00000625705 HCSTQ9UBK5 93 aa9.38□□□□□ -0.91
NPLOC4-221ENST00000625705 C4AP0C0L4 1744 aa9.38□□□□□ -0.91
NPLOC4-221ENST00000625705 COL15A1P39059 1388 aa9.37□□□□□ -0.91
NPLOC4-221ENST00000625705 GNAI1P63096 354 aa9.37□□□□□ -0.91
NPLOC4-221ENST00000625705 INTS5Q6P9B9 1019 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-221ENST00000625705 BABAM1Q9NWV8 329 aa9.37□□□□□ -0.91
NPLOC4-221ENST00000625705 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-221ENST00000625705 ZBTB1Q9Y2K1 713 aa9.37□□□□□ -0.91
NPLOC4-221ENST00000625705 SOS1Q07889 1333 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 MYH14Q7Z406 1995 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 A0A087WZG4 1122 aa9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 EIF2S2P20042 333 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 EIF4A1P60842 406 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 CAMK2BQ13554 666 aa9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 ARHGEF1Q92888 912 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 CFAP44Q96MT7 982 aa9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 IFT57Q9NWB7 429 aa9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 PCDHGA10Q9Y5H3 936 aa9.36□□□□□ -0.91
NPLOC4-221ENST00000625705 PRAMEF22A3QJZ6 481 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 DPYSL4O14531 572 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 NPHP1O15259 732 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 GIGYF1O75420 1035 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 A1BGP04217 495 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 PIP4K2AP48426 406 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 AMIGO3Q86WK7 504 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 NGEFQ8N5V2 710 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 NECTIN2Q92692 538 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 ZBED2Q9BTP6 218 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 SLC4A5Q9BY07 1137 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 MBIPQ9NS73 344 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 USP16Q9Y5T5 823 aa9.35□□□□□ -0.91
NPLOC4-221ENST00000625705 USP42Q9H9J4 1324 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-221ENST00000625705 CHL1O00533 1208 aa9.34□□□□□ -0.91
NPLOC4-221ENST00000625705 MYL6BP14649 208 aa9.34□□□□□ -0.91
NPLOC4-221ENST00000625705 IL6STP40189 918 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-221ENST00000625705 CCDC27Q2M243 656 aa9.34□□□□□ -0.91
NPLOC4-221ENST00000625705 NLGN1Q8N2Q7 840 aa9.34□□□□□ -0.91
NPLOC4-221ENST00000625705 SRP68Q9UHB9 627 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-221ENST00000625705 MMP10P09238 476 aa9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 USPL1Q5W0Q7 1092 aa9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 KIF6Q6ZMV9 814 aa9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 BICDL1Q6ZP65 573 aa9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 DZIP3Q86Y13 1208 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 MYH16Q9H6N6 1097 aa9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 ZNF652Q9Y2D9 606 aa9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
NPLOC4-221ENST00000625705 SCN7AQ01118 1682 aa9.32□□□□□ -0.92
NPLOC4-221ENST00000625705 ELL2O00472 640 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-221ENST00000625705 GYS1P13807 737 aa9.32□□□□□ -0.92
NPLOC4-221ENST00000625705 KRT24Q2M2I5 525 aa9.32□□□□□ -0.92
NPLOC4-221ENST00000625705 DUSP27Q5VZP5 1158 aa9.32□□□□□ -0.92
NPLOC4-221ENST00000625705 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-221ENST00000625705 TSR2Q969E8 191 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-221ENST00000625705 FHDC1Q9C0D6 1143 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-221ENST00000625705 NARFQ9UHQ1 456 aa9.32□□□□□ -0.92
NPLOC4-221ENST00000625705 IL16Q14005 1332 aa9.31□□□□□ -0.92
NPLOC4-221ENST00000625705 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
NPLOC4-221ENST00000625705 BHMG1C9JSJ3 638 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-221ENST00000625705 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-221ENST00000625705 TYW1BQ6NUM6 668 aa9.31□□□□□ -0.92
NPLOC4-221ENST00000625705 WDR63Q8IWG1 891 aa9.31□□□□□ -0.92
NPLOC4-221ENST00000625705 CHMP4AQ9BY43 222 aa9.31□□□□□ -0.92
NPLOC4-221ENST00000625705 BCORQ6W2J9 1755 aa9.3□□□□□ -0.92
NPLOC4-221ENST00000625705 HOXB7P09629 217 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms