RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 VEGFAP15692 232 aaPredicted RBP25.81■■□□□ 1.72
R3HCC1-210ENST00000625275 CRY2Q49AN0 593 aa25.81■■□□□ 1.72
R3HCC1-210ENST00000625275 DPY19L2Q6NUT2 758 aa25.81■■□□□ 1.72
R3HCC1-210ENST00000625275 WDR63Q8IWG1 891 aa25.81■■□□□ 1.72
R3HCC1-210ENST00000625275 YTHDC1Q96MU7 727 aaKnown RBP25.81■■□□□ 1.72
R3HCC1-210ENST00000625275 ALDH1B1P30837 517 aa25.8■■□□□ 1.72
R3HCC1-210ENST00000625275 SUSD4Q5VX71 490 aa25.8■■□□□ 1.72
R3HCC1-210ENST00000625275 LAS1LQ9Y4W2 734 aaKnown RBP25.8■■□□□ 1.72
R3HCC1-210ENST00000625275 ZBED9Q6R2W3 1325 aa25.8■■□□□ 1.72
R3HCC1-210ENST00000625275 NECTIN2Q92692 538 aa25.79■■□□□ 1.72
R3HCC1-210ENST00000625275 IL16Q14005 1332 aa25.79■■□□□ 1.72
R3HCC1-210ENST00000625275 NTSR2O95665 410 aa25.79■■□□□ 1.72
R3HCC1-210ENST00000625275 KRT24Q2M2I5 525 aa25.79■■□□□ 1.72
R3HCC1-210ENST00000625275 PARP10Q53GL7 1025 aa25.79■■□□□ 1.72
R3HCC1-210ENST00000625275 SMC1BQ8NDV3 1235 aa25.79■■□□□ 1.72
R3HCC1-210ENST00000625275 ZNF853P0CG23 659 aa25.78■■□□□ 1.72
R3HCC1-210ENST00000625275 FKBP4Q02790 459 aaKnown RBP eCLIP25.78■■□□□ 1.72
R3HCC1-210ENST00000625275 CFAP44Q96MT7 982 aa25.78■■□□□ 1.72
R3HCC1-210ENST00000625275 IFT57Q9NWB7 429 aa25.78■■□□□ 1.72
R3HCC1-210ENST00000625275 OLFM4Q6UX06 510 aa25.77■■□□□ 1.72
R3HCC1-210ENST00000625275 PPP1R42Q7Z4L9 355 aa25.77■■□□□ 1.72
R3HCC1-210ENST00000625275 SNED1Q8TER0 1413 aa25.76■■□□□ 1.71
R3HCC1-210ENST00000625275 RTKN2Q8IZC4 609 aa25.76■■□□□ 1.71
R3HCC1-210ENST00000625275 RPGRQ92834 1020 aaKnown RBP25.76■■□□□ 1.71
R3HCC1-210ENST00000625275 SPINK5Q9NQ38 1064 aaPredicted RBP25.76■■□□□ 1.71
R3HCC1-210ENST00000625275 DDX21Q9NR30 783 aaKnown RBP eCLIP25.76■■□□□ 1.71
R3HCC1-210ENST00000625275 GNAI1P63096 354 aa25.75■■□□□ 1.71
R3HCC1-210ENST00000625275 GOLGA2Q08379 1002 aa25.75■■□□□ 1.71
R3HCC1-210ENST00000625275 COPS6Q7L5N1 327 aa25.75■■□□□ 1.71
R3HCC1-210ENST00000625275 XAGE3Q8WTP9 111 aa25.75■■□□□ 1.71
R3HCC1-210ENST00000625275 POTECB2RU33 542 aa25.74■■□□□ 1.71
R3HCC1-210ENST00000625275 HOXB7P09629 217 aa25.74■■□□□ 1.71
R3HCC1-210ENST00000625275 HOXA10P31260 410 aaPredicted RBP25.74■■□□□ 1.71
R3HCC1-210ENST00000625275 DDX60Q8IY21 1712 aaKnown RBP25.74■■□□□ 1.71
R3HCC1-210ENST00000625275 TAF1P21675 1872 aa25.73■■□□□ 1.71
R3HCC1-210ENST00000625275 AIMP1Q12904 312 aaKnown RBP25.73■■□□□ 1.71
R3HCC1-210ENST00000625275 HSP90AB3PQ58FF7 597 aa25.73■■□□□ 1.71
R3HCC1-210ENST00000625275 ZNF277Q9NRM2 450 aaPredicted RBP25.73■■□□□ 1.71
R3HCC1-210ENST00000625275 MBIPQ9NS73 344 aa25.73■■□□□ 1.71
R3HCC1-210ENST00000625275 RNF123Q5XPI4 1314 aa25.73■■□□□ 1.71
R3HCC1-210ENST00000625275 HDGFL1Q5TGJ6 251 aa25.72■■□□□ 1.71
R3HCC1-210ENST00000625275 CDCA7LQ96GN5 454 aa25.72■■□□□ 1.71
R3HCC1-210ENST00000625275 UTP14AQ9BVJ6 771 aaKnown RBP25.72■■□□□ 1.71
R3HCC1-210ENST00000625275 CHPF2Q9P2E5 772 aa25.72■■□□□ 1.71
R3HCC1-210ENST00000625275 DDNO94850 711 aaPredicted RBP25.71■■□□□ 1.71
R3HCC1-210ENST00000625275 CC2D2BQ6DHV5 1058 aa25.71■■□□□ 1.71
R3HCC1-210ENST00000625275 TSR2Q969E8 191 aaKnown RBP25.71■■□□□ 1.71
R3HCC1-210ENST00000625275 RBM17Q96I25 401 aaKnown RBP25.71■■□□□ 1.71
R3HCC1-210ENST00000625275 CRAMP1Q96RY5 1269 aa25.71■■□□□ 1.71
R3HCC1-210ENST00000625275 C3orf67Q6ZVT6 689 aa25.7■■□□□ 1.7
R3HCC1-210ENST00000625275 DNAJC5GQ8N7S2 189 aa25.7■■□□□ 1.7
R3HCC1-210ENST00000625275 FANCIQ9NVI1 1328 aa25.69■■□□□ 1.7
R3HCC1-210ENST00000625275 E9PSI1 815 aa25.69■■□□□ 1.7
R3HCC1-210ENST00000625275 IARSP41252 1262 aaKnown RBP25.69■■□□□ 1.7
R3HCC1-210ENST00000625275 SLFN5Q08AF3 891 aa25.69■■□□□ 1.7
R3HCC1-210ENST00000625275 SYNE4Q8N205 404 aa25.69■■□□□ 1.7
R3HCC1-210ENST00000625275 NLRP3Q96P20 1036 aa25.69■■□□□ 1.7
R3HCC1-210ENST00000625275 PSMD1Q99460 953 aa25.69■■□□□ 1.7
R3HCC1-210ENST00000625275 TCIRG1Q13488 830 aa25.68■■□□□ 1.7
R3HCC1-210ENST00000625275 SLC10A5Q5PT55 438 aa25.68■■□□□ 1.7
R3HCC1-210ENST00000625275 NLRP10Q86W26 655 aa25.68■■□□□ 1.7
R3HCC1-210ENST00000625275 HTRA3P83110 453 aa25.67■■□□□ 1.7
R3HCC1-210ENST00000625275 DUSP27Q5VZP5 1158 aa25.67■■□□□ 1.7
R3HCC1-210ENST00000625275 MYH16Q9H6N6 1097 aa25.67■■□□□ 1.7
R3HCC1-210ENST00000625275 DBF4Q9UBU7 674 aaPredicted RBP25.67■■□□□ 1.7
R3HCC1-210ENST00000625275 ZNF541Q9H0D2 1346 aa25.67■■□□□ 1.7
R3HCC1-210ENST00000625275 PPEF1O14829 653 aaPredicted RBP25.66■■□□□ 1.7
R3HCC1-210ENST00000625275 L3MBTL3Q96JM7 780 aaPredicted RBP25.66■■□□□ 1.7
R3HCC1-210ENST00000625275 COL4A5P29400 1685 aa25.66■■□□□ 1.7
R3HCC1-210ENST00000625275 GRIPAP1Q4V328 841 aa25.66■■□□□ 1.7
R3HCC1-210ENST00000625275 TRMT2AQ8IZ69 625 aaKnown RBP25.65■■□□□ 1.7
R3HCC1-210ENST00000625275 PLBD2Q8NHP8 589 aa25.65■■□□□ 1.7
R3HCC1-210ENST00000625275 LRRC37AA6NMS7 1700 aa25.64■■□□□ 1.69
R3HCC1-210ENST00000625275 IQCA1LA6NCM1 817 aa25.64■■□□□ 1.69
R3HCC1-210ENST00000625275 HYPKQ9NX55 129 aa25.64■■□□□ 1.69
R3HCC1-210ENST00000625275 TRMT112Q9UI30 125 aaKnown RBP25.64■■□□□ 1.69
R3HCC1-210ENST00000625275 ADAMTSL1Q8N6G6 1762 aa25.64■■□□□ 1.69
R3HCC1-210ENST00000625275 ABCC4O15439 1325 aa25.63■■□□□ 1.69
R3HCC1-210ENST00000625275 SH3TC1Q8TE82 1336 aa25.63■■□□□ 1.69
R3HCC1-210ENST00000625275 FZD9O00144 591 aa25.62■■□□□ 1.69
R3HCC1-210ENST00000625275 ANKRD13DQ6ZTN6 518 aa25.62■■□□□ 1.69
R3HCC1-210ENST00000625275 SLC51AQ86UW1 340 aa25.62■■□□□ 1.69
R3HCC1-210ENST00000625275 KLRG1Q96E93 195 aa25.62■■□□□ 1.69
R3HCC1-210ENST00000625275 TCERG1O14776 1098 aaKnown RBP25.61■■□□□ 1.69
R3HCC1-210ENST00000625275 HCLS1P14317 486 aaPredicted RBP25.61■■□□□ 1.69
R3HCC1-210ENST00000625275 JDP2Q8WYK2 163 aa25.61■■□□□ 1.69
R3HCC1-210ENST00000625275 CHADLQ6NUI6 762 aa25.6■■□□□ 1.69
R3HCC1-210ENST00000625275 CACNA1FO60840 1977 aa25.6■■□□□ 1.69
R3HCC1-210ENST00000625275 POTEIP0CG38 1075 aa25.6■■□□□ 1.69
R3HCC1-210ENST00000625275 POTEJP0CG39 1038 aa25.6■■□□□ 1.69
R3HCC1-210ENST00000625275 C8orf58Q8NAV2 365 aa25.6■■□□□ 1.69
R3HCC1-210ENST00000625275 TAF1DQ9H5J8 278 aaPredicted RBP25.6■■□□□ 1.69
R3HCC1-210ENST00000625275 ATP6V0A2Q9Y487 856 aa25.6■■□□□ 1.69
R3HCC1-210ENST00000625275 EXOSC9Q06265 439 aaKnown RBP25.59■■□□□ 1.69
R3HCC1-210ENST00000625275 ISCA1Q9BUE6 129 aa25.59■■□□□ 1.69
R3HCC1-210ENST00000625275 TMX4Q9H1E5 349 aaPredicted RBP25.59■■□□□ 1.69
R3HCC1-210ENST00000625275 LTBP1Q14766 1721 aa25.58■■□□□ 1.68
R3HCC1-210ENST00000625275 GPC2Q8N158 579 aa25.57■■□□□ 1.68
R3HCC1-210ENST00000625275 LARGE2Q8N3Y3 721 aa25.57■■□□□ 1.68
R3HCC1-210ENST00000625275 TSPYL6Q8N831 410 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms