RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 ZNF541Q9H0D2 1346 aa17.97■□□□□ 0.47
USH1C-211ENST00000624811 LAMB2P55268 1798 aa17.96■□□□□ 0.47
USH1C-211ENST00000624811 IBTKQ9P2D0 1353 aaPredicted RBP17.96■□□□□ 0.47
USH1C-211ENST00000624811 POTEIP0CG38 1075 aa17.96■□□□□ 0.47
USH1C-211ENST00000624811 POTEJP0CG39 1038 aa17.96■□□□□ 0.47
USH1C-211ENST00000624811 SYNE4Q8N205 404 aa17.96■□□□□ 0.47
USH1C-211ENST00000624811 BABAM1Q9NWV8 329 aa17.96■□□□□ 0.47
USH1C-211ENST00000624811 TRIM35Q9UPQ4 493 aa17.96■□□□□ 0.47
USH1C-211ENST00000624811 SCN4AP35499 1836 aa17.95■□□□□ 0.46
USH1C-211ENST00000624811 IARSP41252 1262 aaKnown RBP17.95■□□□□ 0.46
USH1C-211ENST00000624811 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
USH1C-211ENST00000624811 PPP1R42Q7Z4L9 355 aa17.95■□□□□ 0.46
USH1C-211ENST00000624811 XAGE3Q8WTP9 111 aa17.95■□□□□ 0.46
USH1C-211ENST00000624811 ZNF428Q96B54 188 aa17.95■□□□□ 0.46
USH1C-211ENST00000624811 RBM17Q96I25 401 aaKnown RBP17.94■□□□□ 0.46
USH1C-211ENST00000624811 RIC1Q4ADV7 1423 aa17.94■□□□□ 0.46
USH1C-211ENST00000624811 CHL1O00533 1208 aa17.93■□□□□ 0.46
USH1C-211ENST00000624811 PARP10Q53GL7 1025 aa17.93■□□□□ 0.46
USH1C-211ENST00000624811 UTP14AQ9BVJ6 771 aaKnown RBP17.93■□□□□ 0.46
USH1C-211ENST00000624811 PRKRIP1Q9H875 184 aaPredicted RBP17.93■□□□□ 0.46
USH1C-211ENST00000624811 TAF1P21675 1872 aa17.92■□□□□ 0.46
USH1C-211ENST00000624811 SNED1Q8TER0 1413 aa17.92■□□□□ 0.46
USH1C-211ENST00000624811 PPEF1O14829 653 aaPredicted RBP17.92■□□□□ 0.46
USH1C-211ENST00000624811 HOXA10P31260 410 aaPredicted RBP17.92■□□□□ 0.46
USH1C-211ENST00000624811 IFFO2Q5TF58 517 aa17.92■□□□□ 0.46
USH1C-211ENST00000624811 CHADLQ6NUI6 762 aa17.92■□□□□ 0.46
USH1C-211ENST00000624811 CHPF2Q9P2E5 772 aa17.92■□□□□ 0.46
USH1C-211ENST00000624811 COL4A5P29400 1685 aa17.92■□□□□ 0.46
USH1C-211ENST00000624811 IQCA1LA6NCM1 817 aa17.91■□□□□ 0.46
USH1C-211ENST00000624811 EAPPQ56P03 285 aaPredicted RBP17.91■□□□□ 0.46
USH1C-211ENST00000624811 NLRP3Q96P20 1036 aa17.91■□□□□ 0.46
USH1C-211ENST00000624811 DDX21Q9NR30 783 aaKnown RBP eCLIP17.91■□□□□ 0.46
USH1C-211ENST00000624811 HDGFL1Q5TGJ6 251 aa17.9■□□□□ 0.46
USH1C-211ENST00000624811 L3MBTL3Q96JM7 780 aaPredicted RBP17.9■□□□□ 0.46
USH1C-211ENST00000624811 CRAMP1Q96RY5 1269 aa17.9■□□□□ 0.46
USH1C-211ENST00000624811 PSMD1Q99460 953 aa17.9■□□□□ 0.46
USH1C-211ENST00000624811 TAF1DQ9H5J8 278 aaPredicted RBP17.9■□□□□ 0.46
USH1C-211ENST00000624811 HCLS1P14317 486 aaPredicted RBP17.89■□□□□ 0.45
USH1C-211ENST00000624811 HSP90AB3PQ58FF7 597 aa17.89■□□□□ 0.45
USH1C-211ENST00000624811 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
USH1C-211ENST00000624811 JMYQ8N9B5 988 aa17.89■□□□□ 0.45
USH1C-211ENST00000624811 JDP2Q8WYK2 163 aa17.89■□□□□ 0.45
USH1C-211ENST00000624811 GJA3Q9Y6H8 435 aa17.89■□□□□ 0.45
USH1C-211ENST00000624811 RNF123Q5XPI4 1314 aa17.89■□□□□ 0.45
USH1C-211ENST00000624811 FZD9O00144 591 aa17.88■□□□□ 0.45
USH1C-211ENST00000624811 TCIRG1Q13488 830 aa17.88■□□□□ 0.45
USH1C-211ENST00000624811 CC2D2BQ6DHV5 1058 aa17.88■□□□□ 0.45
USH1C-211ENST00000624811 TRMT112Q9UI30 125 aaKnown RBP17.88■□□□□ 0.45
USH1C-211ENST00000624811 HACL1Q9UJ83 578 aa17.88■□□□□ 0.45
USH1C-211ENST00000624811 CLEC11AQ9Y240 323 aa17.88■□□□□ 0.45
USH1C-211ENST00000624811 ABCC4O15439 1325 aa17.88■□□□□ 0.45
USH1C-211ENST00000624811 DDX60Q8IY21 1712 aaKnown RBP17.87■□□□□ 0.45
USH1C-211ENST00000624811 APAF1O14727 1248 aa17.87■□□□□ 0.45
USH1C-211ENST00000624811 SLC10A5Q5PT55 438 aa17.87■□□□□ 0.45
USH1C-211ENST00000624811 LDHDQ86WU2 507 aa17.87■□□□□ 0.45
USH1C-211ENST00000624811 LARGE2Q8N3Y3 721 aa17.87■□□□□ 0.45
USH1C-211ENST00000624811 MBIPQ9NS73 344 aa17.87■□□□□ 0.45
USH1C-211ENST00000624811 EPHX2P34913 555 aa17.86■□□□□ 0.45
USH1C-211ENST00000624811 EIF6P56537 245 aaKnown RBP17.86■□□□□ 0.45
USH1C-211ENST00000624811 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
USH1C-211ENST00000624811 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
USH1C-211ENST00000624811 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
USH1C-211ENST00000624811 ADAMTSL1Q8N6G6 1762 aa17.86■□□□□ 0.45
USH1C-211ENST00000624811 GPC2Q8N158 579 aa17.85■□□□□ 0.45
USH1C-211ENST00000624811 SH3TC1Q8TE82 1336 aa17.85■□□□□ 0.45
USH1C-211ENST00000624811 TMX4Q9H1E5 349 aaPredicted RBP17.85■□□□□ 0.45
USH1C-211ENST00000624811 DBF4Q9UBU7 674 aaPredicted RBP17.85■□□□□ 0.45
USH1C-211ENST00000624811 MKRN1Q9UHC7 482 aaKnown RBP17.85■□□□□ 0.45
USH1C-211ENST00000624811 ATP6V0A2Q9Y487 856 aa17.85■□□□□ 0.45
USH1C-211ENST00000624811 ATP5J2-PTCD1G3V325 749 aa17.84■□□□□ 0.45
USH1C-211ENST00000624811 ELL2O00472 640 aaPredicted RBP17.84■□□□□ 0.45
USH1C-211ENST00000624811 PPIP5K2O43314 1243 aa17.84■□□□□ 0.45
USH1C-211ENST00000624811 AOC3Q16853 763 aa17.84■□□□□ 0.45
USH1C-211ENST00000624811 PLBD2Q8NHP8 589 aa17.84■□□□□ 0.45
USH1C-211ENST00000624811 HOXB7P09629 217 aa17.83■□□□□ 0.44
USH1C-211ENST00000624811 GRIPAP1Q4V328 841 aa17.83■□□□□ 0.44
USH1C-211ENST00000624811 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
USH1C-211ENST00000624811 NIM1KQ8IY84 436 aa17.83■□□□□ 0.44
USH1C-211ENST00000624811 CREBZFQ9NS37 354 aa17.83■□□□□ 0.44
USH1C-211ENST00000624811 PASKQ96RG2 1323 aa17.82■□□□□ 0.44
USH1C-211ENST00000624811 RTL5Q5HYW3 569 aaPredicted RBP17.82■□□□□ 0.44
USH1C-211ENST00000624811 MAP1SQ66K74 1059 aaPredicted RBP17.82■□□□□ 0.44
USH1C-211ENST00000624811 DDX46Q7L014 1031 aaKnown RBP17.82■□□□□ 0.44
USH1C-211ENST00000624811 ZNF853P0CG23 659 aa17.81■□□□□ 0.44
USH1C-211ENST00000624811 LMOD1P29536 600 aaPredicted RBP17.81■□□□□ 0.44
USH1C-211ENST00000624811 CCDC184Q52MB2 194 aa17.81■□□□□ 0.44
USH1C-211ENST00000624811 DPP8Q6V1X1 898 aaPredicted RBP17.81■□□□□ 0.44
USH1C-211ENST00000624811 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
USH1C-211ENST00000624811 HYPKQ9NX55 129 aa17.81■□□□□ 0.44
USH1C-211ENST00000624811 PCNTO95613 3336 aa17.8■□□□□ 0.44
USH1C-211ENST00000624811 BBOX1O75936 387 aa17.8■□□□□ 0.44
USH1C-211ENST00000624811 ITGBL1O95965 494 aaPredicted RBP17.8■□□□□ 0.44
USH1C-211ENST00000624811 HSPA1AP0DMV8 641 aaKnown RBP17.8■□□□□ 0.44
USH1C-211ENST00000624811 HSPA1BP0DMV9 641 aaKnown RBP17.8■□□□□ 0.44
USH1C-211ENST00000624811 EPS15P42566 896 aa17.8■□□□□ 0.44
USH1C-211ENST00000624811 GNAI1P63096 354 aa17.8■□□□□ 0.44
USH1C-211ENST00000624811 GRAPQ13588 217 aa17.8■□□□□ 0.44
USH1C-211ENST00000624811 COL13A1Q5TAT6 717 aaPredicted RBP17.8■□□□□ 0.44
USH1C-211ENST00000624811 PNMA8AQ86V59 439 aaPredicted RBP17.8■□□□□ 0.44
USH1C-211ENST00000624811 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms