RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 MCTP1Q6DN14 999 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 RPGRIP1Q96KN7 1286 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 CARD11Q9BXL7 1154 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 CBFA2T2O43439 604 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 SMARCA5O60264 1052 aaPredicted RBP3.98□□□□□ -1.77
ATRX-212ENST00000623706 KRT10P13645 584 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 LRPAP1P30533 357 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 IGBP1P78318 339 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 MVPQ14764 893 aaKnown RBP3.98□□□□□ -1.77
ATRX-212ENST00000623706 FILIP1Q7Z7B0 1213 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 ROGDIQ9GZN7 287 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 PCK1P35558 622 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 BRPF1P55201 1214 aaPredicted RBP3.98□□□□□ -1.77
ATRX-212ENST00000623706 SUZ12Q15022 739 aaKnown RBP3.98□□□□□ -1.77
ATRX-212ENST00000623706 TEX9Q8N6V9 391 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 TBC1D2Q9BYX2 928 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 RMI1Q9H9A7 625 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 CCDC162PA2VCL2 907 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 COBLO75128 1261 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 TNNC2P02585 160 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 IRX4P78413 519 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 TRAF1Q13077 416 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 CDCA8Q53HL2 280 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 HSP90AA4PQ58FG1 418 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 ZSCAN30Q86W11 494 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 ATRIPQ8WXE1 791 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 SLC38A10Q9HBR0 1119 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 AGTPBP1Q9UPW5 1226 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 POLR2EP19388 210 aaKnown RBP3.98□□□□□ -1.77
ATRX-212ENST00000623706 LMAN1P49257 510 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 SF3B3Q15393 1217 aaKnown RBP3.98□□□□□ -1.77
ATRX-212ENST00000623706 LUZP2Q86TE4 346 aa3.98□□□□□ -1.77
ATRX-212ENST00000623706 OPHN1O60890 802 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 PDE6BP35913 854 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 PPFIA1Q13136 1202 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 FKBP5Q13451 457 aaPredicted RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 ZNF513Q8N8E2 541 aaPredicted RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 ACRBPQ8NEB7 543 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 CCDC43Q96MW1 224 aaKnown RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 RSPH14Q9UHP6 348 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 SPDYE4A6NLX3 237 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 SLC8A1P32418 973 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 MRPL28Q13084 256 aaKnown RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 TMEM132AQ24JP5 1023 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 MCM10Q7L590 875 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 SH3BP5LQ7L8J4 393 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 C10orf88Q9H8K7 445 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 NUTM2FA1L443 756 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 NUP62P37198 522 aaPredicted RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 DNAJC21Q5F1R6 531 aaKnown RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 NBPF14Q5TI25 921 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 NANOGNBQ7Z5D8 188 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 CROCCP2Q86T23 111 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 SRRM1Q8IYB3 904 aaKnown RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 MPNDQ8N594 471 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 SYTL4Q96C24 671 aaPredicted RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 HAUS1Q96CS2 278 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 TMOD4Q9NZQ9 345 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 BCAP29Q9UHQ4 241 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 KRT5P13647 590 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 CCDC122Q5T0U0 273 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 HDDC2Q7Z4H3 204 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 HDGFL2Q7Z4V5 671 aaPredicted RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 KRT73Q86Y46 540 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 RUFY2Q8WXA3 655 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 GRPEL1Q9HAV7 217 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 APOBEC2Q9Y235 224 aaKnown RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 ARF4P18085 180 aaPredicted RBP3.97□□□□□ -1.77
ATRX-212ENST00000623706 UBE3AQ05086 875 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 KIF4BQ2VIQ3 1234 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 ATAD3BQ5T9A4 648 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 COQ7Q99807 217 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 CRACR2AQ9BSW2 395 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 IL1RAPL2Q9NP60 686 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 GSTTP1A0A1W2PQM5 241 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 ABCB7O75027 752 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 WEE1P30291 646 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 TXLNAP40222 546 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 RANBP1P43487 201 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 RUNDC3AQ59EK9 446 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 ANKRD35Q8N283 1001 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 SPATA18Q8TC71 538 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 SPZ1Q9BXG8 430 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 SPC25Q9HBM1 224 aa3.97□□□□□ -1.77
ATRX-212ENST00000623706 TXNDC9O14530 226 aa3.96□□□□□ -1.77
ATRX-212ENST00000623706 NPM3O75607 178 aaKnown RBP3.96□□□□□ -1.77
ATRX-212ENST00000623706 POLR2FP61218 127 aaKnown RBP3.96□□□□□ -1.77
ATRX-212ENST00000623706 ESRRGP62508 458 aa3.96□□□□□ -1.77
ATRX-212ENST00000623706 NONOQ15233 471 aaKnown RBP eCLIP3.96□□□□□ -1.77
ATRX-212ENST00000623706 TRIM68Q6AZZ1 485 aa3.96□□□□□ -1.77
ATRX-212ENST00000623706 CCDC82Q8N4S0 544 aa3.96□□□□□ -1.77
ATRX-212ENST00000623706 ZNF653Q96CK0 615 aa3.96□□□□□ -1.77
ATRX-212ENST00000623706 PLIN2Q99541 437 aa3.96□□□□□ -1.77
ATRX-212ENST00000623706 LBHD1Q9BQE6 289 aaPredicted RBP3.96□□□□□ -1.77
ATRX-212ENST00000623706 ASCC2Q9H1I8 757 aaPredicted RBP3.96□□□□□ -1.77
ATRX-212ENST00000623706 TRIM39Q9HCM9 518 aa3.96□□□□□ -1.77
ATRX-212ENST00000623706 GMEB2Q9UKD1 530 aa3.96□□□□□ -1.77
ATRX-212ENST00000623706 GOLGA8CPA6NN73 597 aa3.96□□□□□ -1.78
ATRX-212ENST00000623706 SESN3P58005 492 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms