RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 FKBP4Q02790 459 aaKnown RBP eCLIP20.89■□□□□ 0.94
CD40-207ENST00000620709 PPP1R42Q7Z4L9 355 aa20.89■□□□□ 0.94
CD40-207ENST00000620709 ZNF34Q8IZ26 560 aa20.89■□□□□ 0.94
CD40-207ENST00000620709 RTKN2Q8IZC4 609 aa20.89■□□□□ 0.94
CD40-207ENST00000620709 WDR90Q96KV7 1748 aa20.89■□□□□ 0.93
CD40-207ENST00000620709 CHL1O00533 1208 aa20.88■□□□□ 0.93
CD40-207ENST00000620709 TCERG1O14776 1098 aaKnown RBP20.88■□□□□ 0.93
CD40-207ENST00000620709 COPS6Q7L5N1 327 aa20.88■□□□□ 0.93
CD40-207ENST00000620709 XAGE3Q8WTP9 111 aa20.88■□□□□ 0.93
CD40-207ENST00000620709 ZBED9Q6R2W3 1325 aa20.88■□□□□ 0.93
CD40-207ENST00000620709 NTSR2O95665 410 aa20.88■□□□□ 0.93
CD40-207ENST00000620709 POTECB2RU33 542 aa20.87■□□□□ 0.93
CD40-207ENST00000620709 PARP10Q53GL7 1025 aa20.87■□□□□ 0.93
CD40-207ENST00000620709 LRP10Q7Z4F1 713 aa20.87■□□□□ 0.93
CD40-207ENST00000620709 SYNE4Q8N205 404 aa20.87■□□□□ 0.93
CD40-207ENST00000620709 RBM17Q96I25 401 aaKnown RBP20.87■□□□□ 0.93
CD40-207ENST00000620709 CRY2Q49AN0 593 aa20.86■□□□□ 0.93
CD40-207ENST00000620709 DNAJC5GQ8N7S2 189 aa20.86■□□□□ 0.93
CD40-207ENST00000620709 ZNF428Q96B54 188 aa20.86■□□□□ 0.93
CD40-207ENST00000620709 UTP14AQ9BVJ6 771 aaKnown RBP20.86■□□□□ 0.93
CD40-207ENST00000620709 IBTKQ9P2D0 1353 aaPredicted RBP20.85■□□□□ 0.93
CD40-207ENST00000620709 IARSP41252 1262 aaKnown RBP20.84■□□□□ 0.93
CD40-207ENST00000620709 HDGFL1Q5TGJ6 251 aa20.84■□□□□ 0.93
CD40-207ENST00000620709 C3orf67Q6ZVT6 689 aa20.84■□□□□ 0.93
CD40-207ENST00000620709 NLRP3Q96P20 1036 aa20.84■□□□□ 0.93
CD40-207ENST00000620709 DDX21Q9NR30 783 aaKnown RBP eCLIP20.84■□□□□ 0.93
CD40-207ENST00000620709 CHPF2Q9P2E5 772 aa20.84■□□□□ 0.93
CD40-207ENST00000620709 APAF1O14727 1248 aa20.83■□□□□ 0.93
CD40-207ENST00000620709 HSP90AB3PQ58FF7 597 aa20.83■□□□□ 0.93
CD40-207ENST00000620709 PPEF1O14829 653 aaPredicted RBP20.83■□□□□ 0.92
CD40-207ENST00000620709 ZNF541Q9H0D2 1346 aa20.82■□□□□ 0.92
CD40-207ENST00000620709 CFAP44Q96MT7 982 aa20.82■□□□□ 0.92
CD40-207ENST00000620709 TMX4Q9H1E5 349 aaPredicted RBP20.82■□□□□ 0.92
CD40-207ENST00000620709 HOXA10P31260 410 aaPredicted RBP20.81■□□□□ 0.92
CD40-207ENST00000620709 SLC51AQ86UW1 340 aa20.81■□□□□ 0.92
CD40-207ENST00000620709 KLRG1Q96E93 195 aa20.81■□□□□ 0.92
CD40-207ENST00000620709 CRAMP1Q96RY5 1269 aa20.81■□□□□ 0.92
CD40-207ENST00000620709 TRMT112Q9UI30 125 aaKnown RBP20.81■□□□□ 0.92
CD40-207ENST00000620709 RIC1Q4ADV7 1423 aa20.8■□□□□ 0.92
CD40-207ENST00000620709 HCLS1P14317 486 aaPredicted RBP20.8■□□□□ 0.92
CD40-207ENST00000620709 TCIRG1Q13488 830 aa20.8■□□□□ 0.92
CD40-207ENST00000620709 DUSP27Q5VZP5 1158 aa20.8■□□□□ 0.92
CD40-207ENST00000620709 CC2D2BQ6DHV5 1058 aa20.8■□□□□ 0.92
CD40-207ENST00000620709 NLRP10Q86W26 655 aa20.8■□□□□ 0.92
CD40-207ENST00000620709 JDP2Q8WYK2 163 aa20.8■□□□□ 0.92
CD40-207ENST00000620709 MBIPQ9NS73 344 aa20.8■□□□□ 0.92
CD40-207ENST00000620709 ANKRD36CQ5JPF3 1778 aa20.8■□□□□ 0.92
CD40-207ENST00000620709 IQCA1LA6NCM1 817 aa20.79■□□□□ 0.92
CD40-207ENST00000620709 POTEIP0CG38 1075 aa20.79■□□□□ 0.92
CD40-207ENST00000620709 POTEJP0CG39 1038 aa20.79■□□□□ 0.92
CD40-207ENST00000620709 PSMD1Q99460 953 aa20.79■□□□□ 0.92
CD40-207ENST00000620709 EAPPQ56P03 285 aaPredicted RBP20.78■□□□□ 0.92
CD40-207ENST00000620709 CHADLQ6NUI6 762 aa20.78■□□□□ 0.92
CD40-207ENST00000620709 DBF4Q9UBU7 674 aaPredicted RBP20.78■□□□□ 0.92
CD40-207ENST00000620709 ELL2O00472 640 aaPredicted RBP20.78■□□□□ 0.92
CD40-207ENST00000620709 SLC10A5Q5PT55 438 aa20.78■□□□□ 0.92
CD40-207ENST00000620709 LARGE2Q8N3Y3 721 aa20.78■□□□□ 0.92
CD40-207ENST00000620709 GJA3Q9Y6H8 435 aa20.78■□□□□ 0.92
CD40-207ENST00000620709 HOXB7P09629 217 aa20.77■□□□□ 0.92
CD40-207ENST00000620709 CLEC11AQ9Y240 323 aa20.77■□□□□ 0.92
CD40-207ENST00000620709 ATP5J2-PTCD1G3V325 749 aa20.76■□□□□ 0.91
CD40-207ENST00000620709 EIF6P56537 245 aaKnown RBP20.76■□□□□ 0.91
CD40-207ENST00000620709 GNAI1P63096 354 aa20.76■□□□□ 0.91
CD40-207ENST00000620709 CALD1Q05682 793 aaKnown RBP20.76■□□□□ 0.91
CD40-207ENST00000620709 ANKRD13DQ6ZTN6 518 aa20.76■□□□□ 0.91
CD40-207ENST00000620709 PLBD2Q8NHP8 589 aa20.76■□□□□ 0.91
CD40-207ENST00000620709 TAF1DQ9H5J8 278 aaPredicted RBP20.76■□□□□ 0.91
CD40-207ENST00000620709 HACL1Q9UJ83 578 aa20.76■□□□□ 0.91
CD40-207ENST00000620709 ABCC4O15439 1325 aa20.76■□□□□ 0.91
CD40-207ENST00000620709 RNF123Q5XPI4 1314 aa20.76■□□□□ 0.91
CD40-207ENST00000620709 SH3TC1Q8TE82 1336 aa20.76■□□□□ 0.91
CD40-207ENST00000620709 FZD9O00144 591 aa20.75■□□□□ 0.91
CD40-207ENST00000620709 L3MBTL3Q96JM7 780 aaPredicted RBP20.75■□□□□ 0.91
CD40-207ENST00000620709 IFT57Q9NWB7 429 aa20.75■□□□□ 0.91
CD40-207ENST00000620709 HYPKQ9NX55 129 aa20.75■□□□□ 0.91
CD40-207ENST00000620709 GRIPAP1Q4V328 841 aa20.74■□□□□ 0.91
CD40-207ENST00000620709 DDX46Q7L014 1031 aaKnown RBP20.74■□□□□ 0.91
CD40-207ENST00000620709 SCN4AP35499 1836 aa20.74■□□□□ 0.91
CD40-207ENST00000620709 LAMB2P55268 1798 aa20.74■□□□□ 0.91
CD40-207ENST00000620709 SNED1Q8TER0 1413 aa20.74■□□□□ 0.91
CD40-207ENST00000620709 PPIP5K2O43314 1243 aa20.73■□□□□ 0.91
CD40-207ENST00000620709 RTL5Q5HYW3 569 aaPredicted RBP20.73■□□□□ 0.91
CD40-207ENST00000620709 LDHDQ86WU2 507 aa20.73■□□□□ 0.91
CD40-207ENST00000620709 ATP6V0A2Q9Y487 856 aa20.73■□□□□ 0.91
CD40-207ENST00000620709 ZNF853P0CG23 659 aa20.73■□□□□ 0.91
CD40-207ENST00000620709 EPHX2P34913 555 aa20.73■□□□□ 0.91
CD40-207ENST00000620709 RIC3Q7Z5B4 369 aa20.73■□□□□ 0.91
CD40-207ENST00000620709 GPC2Q8N158 579 aa20.73■□□□□ 0.91
CD40-207ENST00000620709 AOC3Q16853 763 aa20.72■□□□□ 0.91
CD40-207ENST00000620709 NIM1KQ8IY84 436 aa20.72■□□□□ 0.91
CD40-207ENST00000620709 FAM89AQ96GI7 184 aa20.72■□□□□ 0.91
CD40-207ENST00000620709 BBOX1O75936 387 aa20.71■□□□□ 0.91
CD40-207ENST00000620709 GOLGA2Q08379 1002 aa20.71■□□□□ 0.91
CD40-207ENST00000620709 DPP8Q6V1X1 898 aaPredicted RBP20.71■□□□□ 0.91
CD40-207ENST00000620709 COL4A5P29400 1685 aa20.71■□□□□ 0.91
CD40-207ENST00000620709 LMOD1P29536 600 aaPredicted RBP20.7■□□□□ 0.9
CD40-207ENST00000620709 C8orf58Q8NAV2 365 aa20.7■□□□□ 0.9
CD40-207ENST00000620709 ISCA1Q9BUE6 129 aa20.7■□□□□ 0.9
CD40-207ENST00000620709 PHAXQ9H814 394 aaKnown RBP20.7■□□□□ 0.9
CD40-207ENST00000620709 PCNTO95613 3336 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms