RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 POLD1P28340 1107 aa12.21□□□□□ -0.45
TRIO-224ENST00000620511 CCDC24Q8N4L8 307 aa12.21□□□□□ -0.45
TRIO-224ENST00000620511 PARP3Q9Y6F1 533 aa12.21□□□□□ -0.45
TRIO-224ENST00000620511 ABCC4O15439 1325 aa12.21□□□□□ -0.45
TRIO-224ENST00000620511 KIF16BQ96L93 1317 aa12.21□□□□□ -0.45
TRIO-224ENST00000620511 DDX60Q8IY21 1712 aaKnown RBP12.21□□□□□ -0.45
TRIO-224ENST00000620511 ABCC12Q96J65 1359 aa12.21□□□□□ -0.45
TRIO-224ENST00000620511 FAM177BA6PVY3 158 aa12.21□□□□□ -0.46
TRIO-224ENST00000620511 RLBP1P12271 317 aa12.21□□□□□ -0.46
TRIO-224ENST00000620511 ATF7IPQ6VMQ6 1270 aa12.21□□□□□ -0.46
TRIO-224ENST00000620511 CCDC191Q8NCU4 936 aa12.21□□□□□ -0.46
TRIO-224ENST00000620511 LINS1Q8NG48 757 aa12.21□□□□□ -0.46
TRIO-224ENST00000620511 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
TRIO-224ENST00000620511 TNRC6CQ9HCJ0 1690 aaKnown RBP12.21□□□□□ -0.46
TRIO-224ENST00000620511 LAMB2P55268 1798 aa12.2□□□□□ -0.46
TRIO-224ENST00000620511 PLIN1O60240 522 aa12.2□□□□□ -0.46
TRIO-224ENST00000620511 CASP7P55210 303 aa12.2□□□□□ -0.46
TRIO-224ENST00000620511 GCKRQ14397 625 aa12.2□□□□□ -0.46
TRIO-224ENST00000620511 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
TRIO-224ENST00000620511 PARP10Q53GL7 1025 aa12.2□□□□□ -0.46
TRIO-224ENST00000620511 NBPF5PQ86XG9 351 aaPredicted RBP12.2□□□□□ -0.46
TRIO-224ENST00000620511 NUTM1Q86Y26 1132 aa12.2□□□□□ -0.46
TRIO-224ENST00000620511 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
TRIO-224ENST00000620511 FRAT1Q92837 279 aaPredicted RBP12.2□□□□□ -0.46
TRIO-224ENST00000620511 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
TRIO-224ENST00000620511 SLC4A10Q6U841 1118 aa12.19□□□□□ -0.46
TRIO-224ENST00000620511 TPTE2Q6XPS3 522 aa12.19□□□□□ -0.46
TRIO-224ENST00000620511 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
TRIO-224ENST00000620511 FAM89AQ96GI7 184 aa12.19□□□□□ -0.46
TRIO-224ENST00000620511 UTP14AQ9BVJ6 771 aaKnown RBP12.19□□□□□ -0.46
TRIO-224ENST00000620511 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
TRIO-224ENST00000620511 CWC25Q9NXE8 425 aaPredicted RBP12.19□□□□□ -0.46
TRIO-224ENST00000620511 COL11A2P13942 1736 aaPredicted RBP12.19□□□□□ -0.46
TRIO-224ENST00000620511 BRCA1P38398 1863 aaKnown RBP12.18□□□□□ -0.46
TRIO-224ENST00000620511 H7C1W4 665 aa12.18□□□□□ -0.46
TRIO-224ENST00000620511 IPO8O15397 1037 aaKnown RBP12.18□□□□□ -0.46
TRIO-224ENST00000620511 SLC10A5Q5PT55 438 aa12.18□□□□□ -0.46
TRIO-224ENST00000620511 INTS3Q68E01 1043 aaKnown RBP12.18□□□□□ -0.46
TRIO-224ENST00000620511 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
TRIO-224ENST00000620511 CNBD1Q8NA66 436 aa12.18□□□□□ -0.46
TRIO-224ENST00000620511 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
TRIO-224ENST00000620511 CLUAP1Q96AJ1 413 aa12.18□□□□□ -0.46
TRIO-224ENST00000620511 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
TRIO-224ENST00000620511 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
TRIO-224ENST00000620511 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
TRIO-224ENST00000620511 KLRG2A4D1S0 409 aaPredicted RBP12.17□□□□□ -0.46
TRIO-224ENST00000620511 ALDH1L1O75891 902 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 KCNA3P22001 575 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 NEXNQ0ZGT2 675 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
TRIO-224ENST00000620511 PPP1R42Q7Z4L9 355 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 SRCIN1Q9C0H9 1055 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 NYXQ9GZU5 481 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 CD2APQ9Y5K6 639 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 RNF123Q5XPI4 1314 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 TAF1P21675 1872 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 MYH3P11055 1940 aa12.17□□□□□ -0.46
TRIO-224ENST00000620511 PCCAP05165 728 aaPredicted RBP12.16□□□□□ -0.46
TRIO-224ENST00000620511 C20orf194Q5TEA3 1177 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 NLGN2Q8NFZ4 835 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 KAZALD1Q96I82 304 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 BRIP1Q9BX63 1249 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 UTYO14607 1347 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 SH3TC1Q8TE82 1336 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
TRIO-224ENST00000620511 HCLS1P14317 486 aaPredicted RBP12.16□□□□□ -0.46
TRIO-224ENST00000620511 TMEM57Q8N5G2 664 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 SYT17Q9BSW7 474 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 COL4A1P02462 1669 aa12.16□□□□□ -0.46
TRIO-224ENST00000620511 CDHR2Q9BYE9 1310 aa12.15□□□□□ -0.46
TRIO-224ENST00000620511 GRM8O00222 908 aa12.15□□□□□ -0.46
TRIO-224ENST00000620511 CCT4P50991 539 aaKnown RBP12.15□□□□□ -0.46
TRIO-224ENST00000620511 CRY2Q49AN0 593 aa12.15□□□□□ -0.46
TRIO-224ENST00000620511 UBE3BQ7Z3V4 1068 aa12.15□□□□□ -0.46
TRIO-224ENST00000620511 A0A0G2JLW4 131 aa12.14□□□□□ -0.47
TRIO-224ENST00000620511 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
TRIO-224ENST00000620511 CHRNA5P30532 468 aa12.14□□□□□ -0.47
TRIO-224ENST00000620511 RRP1P56182 461 aaKnown RBP12.14□□□□□ -0.47
TRIO-224ENST00000620511 ST5P78524 1137 aa12.14□□□□□ -0.47
TRIO-224ENST00000620511 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
TRIO-224ENST00000620511 SRGNP10124 158 aa12.13□□□□□ -0.47
TRIO-224ENST00000620511 DPEP1P16444 411 aa12.13□□□□□ -0.47
TRIO-224ENST00000620511 TGFB2P61812 414 aa12.13□□□□□ -0.47
TRIO-224ENST00000620511 FOXO4P98177 505 aa12.13□□□□□ -0.47
TRIO-224ENST00000620511 EPHA10Q5JZY3 1008 aa12.13□□□□□ -0.47
TRIO-224ENST00000620511 MEIS3Q99687 375 aa12.13□□□□□ -0.47
TRIO-224ENST00000620511 PPP1R1BQ9UD71 204 aaPredicted RBP12.13□□□□□ -0.47
TRIO-224ENST00000620511 SLX4Q8IY92 1834 aa12.13□□□□□ -0.47
TRIO-224ENST00000620511 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
TRIO-224ENST00000620511 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
TRIO-224ENST00000620511 SF3B3Q15393 1217 aaKnown RBP12.12□□□□□ -0.47
TRIO-224ENST00000620511 PLA2G12BQ9BX93 195 aa12.12□□□□□ -0.47
TRIO-224ENST00000620511 CACNA1SQ13698 1873 aa12.12□□□□□ -0.47
TRIO-224ENST00000620511 ZBTB7BO15156 539 aaPredicted RBP12.11□□□□□ -0.47
TRIO-224ENST00000620511 PDE8AO60658 829 aa12.11□□□□□ -0.47
TRIO-224ENST00000620511 HOXA10P31260 410 aaPredicted RBP12.11□□□□□ -0.47
TRIO-224ENST00000620511 PDE6BP35913 854 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms