RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 HOXA10P31260 410 aaPredicted RBP14.64□□□□□ -0.07
TARDBP-221ENST00000619555 IARSP41252 1262 aaKnown RBP14.64□□□□□ -0.07
TARDBP-221ENST00000619555 LMOD3Q0VAK6 560 aa14.64□□□□□ -0.07
TARDBP-221ENST00000619555 SLC51AQ86UW1 340 aa14.64□□□□□ -0.07
TARDBP-221ENST00000619555 RPGRQ92834 1020 aaKnown RBP14.64□□□□□ -0.07
TARDBP-221ENST00000619555 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
TARDBP-221ENST00000619555 TAF1DQ9H5J8 278 aaPredicted RBP14.64□□□□□ -0.07
TARDBP-221ENST00000619555 BABAM1Q9NWV8 329 aa14.64□□□□□ -0.07
TARDBP-221ENST00000619555 IBTKQ9P2D0 1353 aaPredicted RBP14.63□□□□□ -0.07
TARDBP-221ENST00000619555 IQCA1LA6NCM1 817 aa14.63□□□□□ -0.07
TARDBP-221ENST00000619555 TCERG1O14776 1098 aaKnown RBP14.63□□□□□ -0.07
TARDBP-221ENST00000619555 KRT24Q2M2I5 525 aa14.63□□□□□ -0.07
TARDBP-221ENST00000619555 SNED1Q8TER0 1413 aa14.63□□□□□ -0.07
TARDBP-221ENST00000619555 SCN4AP35499 1836 aa14.62□□□□□ -0.07
TARDBP-221ENST00000619555 FZD9O00144 591 aa14.62□□□□□ -0.07
TARDBP-221ENST00000619555 AIMP1Q12904 312 aaKnown RBP14.62□□□□□ -0.07
TARDBP-221ENST00000619555 RIC1Q4ADV7 1423 aa14.62□□□□□ -0.07
TARDBP-221ENST00000619555 PARP10Q53GL7 1025 aa14.62□□□□□ -0.07
TARDBP-221ENST00000619555 COPS6Q7L5N1 327 aa14.62□□□□□ -0.07
TARDBP-221ENST00000619555 PPP1R42Q7Z4L9 355 aa14.62□□□□□ -0.07
TARDBP-221ENST00000619555 RBM17Q96I25 401 aaKnown RBP14.62□□□□□ -0.07
TARDBP-221ENST00000619555 CRAMP1Q96RY5 1269 aa14.62□□□□□ -0.07
TARDBP-221ENST00000619555 PSMD1Q99460 953 aa14.62□□□□□ -0.07
TARDBP-221ENST00000619555 TRIM35Q9UPQ4 493 aa14.62□□□□□ -0.07
TARDBP-221ENST00000619555 LAS1LQ9Y4W2 734 aaKnown RBP14.62□□□□□ -0.07
TARDBP-221ENST00000619555 CHL1O00533 1208 aa14.61□□□□□ -0.07
TARDBP-221ENST00000619555 EAPPQ56P03 285 aaPredicted RBP14.61□□□□□ -0.07
TARDBP-221ENST00000619555 SLC10A5Q5PT55 438 aa14.61□□□□□ -0.07
TARDBP-221ENST00000619555 CC2D2BQ6DHV5 1058 aa14.61□□□□□ -0.07
TARDBP-221ENST00000619555 LDHDQ86WU2 507 aa14.61□□□□□ -0.07
TARDBP-221ENST00000619555 XAGE3Q8WTP9 111 aa14.61□□□□□ -0.07
TARDBP-221ENST00000619555 RUNDC1Q96C34 613 aa14.61□□□□□ -0.07
TARDBP-221ENST00000619555 UTP14AQ9BVJ6 771 aaKnown RBP14.61□□□□□ -0.07
TARDBP-221ENST00000619555 ADAMTS8Q9UP79 889 aa14.61□□□□□ -0.07
TARDBP-221ENST00000619555 PPEF1O14829 653 aaPredicted RBP14.6□□□□□ -0.07
TARDBP-221ENST00000619555 WDR43Q15061 677 aaKnown RBP eCLIP14.6□□□□□ -0.07
TARDBP-221ENST00000619555 COL13A1Q5TAT6 717 aaPredicted RBP14.6□□□□□ -0.07
TARDBP-221ENST00000619555 JDP2Q8WYK2 163 aa14.6□□□□□ -0.07
TARDBP-221ENST00000619555 NLRP3Q96P20 1036 aa14.6□□□□□ -0.07
TARDBP-221ENST00000619555 HACL1Q9UJ83 578 aa14.6□□□□□ -0.07
TARDBP-221ENST00000619555 COL4A5P29400 1685 aa14.59□□□□□ -0.07
TARDBP-221ENST00000619555 EPHX2P34913 555 aa14.59□□□□□ -0.07
TARDBP-221ENST00000619555 DDX21Q9NR30 783 aaKnown RBP eCLIP14.59□□□□□ -0.07
TARDBP-221ENST00000619555 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
TARDBP-221ENST00000619555 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
TARDBP-221ENST00000619555 RNF123Q5XPI4 1314 aa14.59□□□□□ -0.07
TARDBP-221ENST00000619555 PASKQ96RG2 1323 aa14.59□□□□□ -0.07
TARDBP-221ENST00000619555 HCLS1P14317 486 aaPredicted RBP14.58□□□□□ -0.08
TARDBP-221ENST00000619555 TCIRG1Q13488 830 aa14.58□□□□□ -0.08
TARDBP-221ENST00000619555 HSP90AB3PQ58FF7 597 aa14.58□□□□□ -0.08
TARDBP-221ENST00000619555 NLRP10Q86W26 655 aa14.58□□□□□ -0.08
TARDBP-221ENST00000619555 GPC2Q8N158 579 aa14.58□□□□□ -0.08
TARDBP-221ENST00000619555 LARGE2Q8N3Y3 721 aa14.58□□□□□ -0.08
TARDBP-221ENST00000619555 ZNF428Q96B54 188 aa14.58□□□□□ -0.08
TARDBP-221ENST00000619555 MKRN1Q9UHC7 482 aaKnown RBP14.58□□□□□ -0.08
TARDBP-221ENST00000619555 GJA3Q9Y6H8 435 aa14.58□□□□□ -0.08
TARDBP-221ENST00000619555 ITGBL1O95965 494 aaPredicted RBP14.57□□□□□ -0.08
TARDBP-221ENST00000619555 HSPA1AP0DMV8 641 aaKnown RBP14.57□□□□□ -0.08
TARDBP-221ENST00000619555 HSPA1BP0DMV9 641 aaKnown RBP14.57□□□□□ -0.08
TARDBP-221ENST00000619555 EIF6P56537 245 aaKnown RBP14.57□□□□□ -0.08
TARDBP-221ENST00000619555 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
TARDBP-221ENST00000619555 GRIPAP1Q4V328 841 aa14.57□□□□□ -0.08
TARDBP-221ENST00000619555 CHPF2Q9P2E5 772 aa14.57□□□□□ -0.08
TARDBP-221ENST00000619555 ABCC4O15439 1325 aa14.57□□□□□ -0.08
TARDBP-221ENST00000619555 ANKRD36CQ5JPF3 1778 aa14.56□□□□□ -0.08
TARDBP-221ENST00000619555 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
TARDBP-221ENST00000619555 ATP6V0A2Q9Y487 856 aa14.56□□□□□ -0.08
TARDBP-221ENST00000619555 PPIP5K2O43314 1243 aa14.55□□□□□ -0.08
TARDBP-221ENST00000619555 HDGFL1Q5TGJ6 251 aa14.55□□□□□ -0.08
TARDBP-221ENST00000619555 MAP1SQ66K74 1059 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-221ENST00000619555 PNMA8AQ86V59 439 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-221ENST00000619555 PRKRIP1Q9H875 184 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-221ENST00000619555 LAMB2P55268 1798 aa14.55□□□□□ -0.08
TARDBP-221ENST00000619555 AOC3Q16853 763 aa14.54□□□□□ -0.08
TARDBP-221ENST00000619555 NIM1KQ8IY84 436 aa14.54□□□□□ -0.08
TARDBP-221ENST00000619555 CNTROBQ8N137 903 aa14.54□□□□□ -0.08
TARDBP-221ENST00000619555 CFAP44Q96MT7 982 aa14.54□□□□□ -0.08
TARDBP-221ENST00000619555 TMX4Q9H1E5 349 aaPredicted RBP14.54□□□□□ -0.08
TARDBP-221ENST00000619555 SH3TC1Q8TE82 1336 aa14.54□□□□□ -0.08
TARDBP-221ENST00000619555 ADAMTSL1Q8N6G6 1762 aa14.54□□□□□ -0.08
TARDBP-221ENST00000619555 TAF1P21675 1872 aa14.54□□□□□ -0.08
TARDBP-221ENST00000619555 LTBP1Q14766 1721 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 TMEM88BA6NKF7 163 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 BBOX1O75936 387 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 EPS15P42566 896 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 SCNN1DP51172 638 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 DUSP27Q5VZP5 1158 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 ANKRD13DQ6ZTN6 518 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 SP8Q8IXZ3 490 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 PLBD2Q8NHP8 589 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 MBIPQ9NS73 344 aa14.53□□□□□ -0.08
TARDBP-221ENST00000619555 CNTNAP1P78357 1384 aa14.52□□□□□ -0.08
TARDBP-221ENST00000619555 ATP5J2-PTCD1G3V325 749 aa14.52□□□□□ -0.09
TARDBP-221ENST00000619555 APAF1O14727 1248 aa14.52□□□□□ -0.09
TARDBP-221ENST00000619555 HOXB7P09629 217 aa14.52□□□□□ -0.09
TARDBP-221ENST00000619555 LMOD1P29536 600 aaPredicted RBP14.52□□□□□ -0.09
TARDBP-221ENST00000619555 DDX46Q7L014 1031 aaKnown RBP14.52□□□□□ -0.09
TARDBP-221ENST00000619555 ISCA1Q9BUE6 129 aa14.52□□□□□ -0.09
TARDBP-221ENST00000619555 RTFDC1Q9BY42 306 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms