RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 MAP2K1Q02750 393 aaPredicted RBP4.35□□□□□ -1.71
SMC5-204ENST00000618375 LMOD3Q0VAK6 560 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 CCDC173Q0VFZ6 552 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 MCM6Q14566 821 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 NBPF6Q5VWK0 638 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 FIGNL1Q6PIW4 674 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 CASC1Q6TDU7 716 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 SASS6Q6UVJ0 657 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 NBPF5PQ86XG9 351 aaPredicted RBP4.35□□□□□ -1.71
SMC5-204ENST00000618375 CERS3Q8IU89 383 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 PHTF2Q8N3S3 785 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 NGEFQ8N5V2 710 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 ABHD17AQ96GS6 310 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 NBPF4Q96M43 638 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 TIGD1Q96MW7 591 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 PPP1R9BQ96SB3 815 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 PRDM16Q9HAZ2 1276 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 BRMS1Q9HCU9 246 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 CABP1Q9NZU7 370 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 CALCOCO1Q9P1Z2 691 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 CGNQ9P2M7 1197 aaKnown RBP4.35□□□□□ -1.71
SMC5-204ENST00000618375 ATXN7L1Q9ULK2 861 aaPredicted RBP4.35□□□□□ -1.71
SMC5-204ENST00000618375 CEP83Q9Y592 693 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 EIF4G1Q04637 1599 aaKnown RBP4.35□□□□□ -1.71
SMC5-204ENST00000618375 WDR97A6NE52 1622 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 ABCA5Q8WWZ7 1642 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 KIF1CO43896 1103 aaKnown RBP4.34□□□□□ -1.71
SMC5-204ENST00000618375 IGHA1P01876 353 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 TATP17735 454 aaPredicted RBP4.34□□□□□ -1.71
SMC5-204ENST00000618375 FGFR3P22607 806 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 SSR1P43307 286 aaKnown RBP4.34□□□□□ -1.71
SMC5-204ENST00000618375 SMTNP53814 917 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 BECN1Q14457 450 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 ZKSCAN8Q15776 578 aaPredicted RBP4.34□□□□□ -1.71
SMC5-204ENST00000618375 BICDL1Q6ZP65 573 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 OTUD6BQ8N6M0 293 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 GOLGA6L1Q8N7Z2 621 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 KLRG1Q96E93 195 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 NCAPGQ9BPX3 1015 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 GDF2Q9UK05 429 aaPredicted RBP4.34□□□□□ -1.71
SMC5-204ENST00000618375 HRH3Q9Y5N1 445 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 KIF16BQ96L93 1317 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 KIAA1107Q9UPP5 1409 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 BAZ1BQ9UIG0 1483 aaKnown RBP4.34□□□□□ -1.71
SMC5-204ENST00000618375 ERICH3Q5RHP9 1530 aa4.34□□□□□ -1.71
SMC5-204ENST00000618375 GOLGA3Q08378 1498 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 DCDC2BA2VCK2 349 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 E9PSI1 815 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 BACH1O14867 736 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 CCDC172P0C7W6 258 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 MSNP26038 577 aaKnown RBP4.33□□□□□ -1.72
SMC5-204ENST00000618375 CALRP27797 417 aaKnown RBP4.33□□□□□ -1.72
SMC5-204ENST00000618375 GTF2F1P35269 517 aaKnown RBP eCLIP4.33□□□□□ -1.72
SMC5-204ENST00000618375 SCNN1DP51172 638 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 OS9Q13438 667 aaPredicted RBP4.33□□□□□ -1.72
SMC5-204ENST00000618375 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.33□□□□□ -1.72
SMC5-204ENST00000618375 C1orf216Q8TAB5 229 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 TMC1Q8TDI8 760 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 EDARADDQ8WWZ3 215 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 GRPEL1Q9HAV7 217 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 NEUROD4Q9HD90 331 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 LRRC4BQ9NT99 713 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 TERF2IPQ9NYB0 399 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 MKL2Q9ULH7 1088 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 NOD1Q9Y239 953 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 SH3BP1Q9Y3L3 701 aa4.33□□□□□ -1.72
SMC5-204ENST00000618375 VPS8Q8N3P4 1428 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 RRBP1Q9P2E9 1410 aaKnown RBP4.32□□□□□ -1.72
SMC5-204ENST00000618375 A6NJY4 79 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 PIK3CDO00329 1044 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 PIK3R2O00459 728 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 MSTNO14793 375 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 KHNYNO15037 678 aaKnown RBP4.32□□□□□ -1.72
SMC5-204ENST00000618375 ATXN7O15265 892 aaPredicted RBP4.32□□□□□ -1.72
SMC5-204ENST00000618375 NRDCO43847 1150 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 BNIP3LO60238 219 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 KCNJ4P48050 445 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 GTF2IP78347 998 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 DDX10Q13206 875 aaKnown RBP4.32□□□□□ -1.72
SMC5-204ENST00000618375 SUZ12Q15022 739 aaKnown RBP4.32□□□□□ -1.72
SMC5-204ENST00000618375 MNS1Q8NEH6 495 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 MKL1Q969V6 931 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 DCAF5Q96JK2 942 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 PRIMPOLQ96LW4 560 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 FEZ1Q99689 392 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 PANK2Q9BZ23 570 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 ZCCHC2Q9C0B9 1178 aaKnown RBP4.32□□□□□ -1.72
SMC5-204ENST00000618375 CRISPLD1Q9H336 500 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 GGA1Q9UJY5 639 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 PRR12Q9ULL5 1215 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 ZNF232Q9UNY5 417 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 NUDCQ9Y266 331 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 COG6Q9Y2V7 657 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 PCDHGC4Q9Y5F7 938 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 PARP3Q9Y6F1 533 aa4.32□□□□□ -1.72
SMC5-204ENST00000618375 UHRF1BP1LA0JNW5 1464 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 CCDC88BA6NC98 1476 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 FHAD1B1AJZ9 1412 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 CNTLNQ9NXG0 1405 aa4.31□□□□□ -1.72
SMC5-204ENST00000618375 A0A1W2PNR3 127 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms