RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, human

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-223	ENST00000618001	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.73	□□□□□ -0.69
TGIF1-223	ENST00000618001	TTLL7	Q6ZT98	887 aa		10.73	□□□□□ -0.69
TGIF1-223	ENST00000618001	FZD9	O00144	591 aa		10.72	□□□□□ -0.69
TGIF1-223	ENST00000618001	NTSR2	O95665	410 aa		10.72	□□□□□ -0.69
TGIF1-223	ENST00000618001	PDIA6	Q15084	440 aa		10.72	□□□□□ -0.69
TGIF1-223	ENST00000618001	LDHD	Q86WU2	507 aa		10.72	□□□□□ -0.69
TGIF1-223	ENST00000618001	THUMPD2	Q9BTF0	503 aa	Known RBP	10.72	□□□□□ -0.69
TGIF1-223	ENST00000618001	CREBZF	Q9NS37	354 aa		10.72	□□□□□ -0.69
TGIF1-223	ENST00000618001	PASK	Q96RG2	1323 aa		10.72	□□□□□ -0.69
TGIF1-223	ENST00000618001	PARP10	Q53GL7	1025 aa		10.72	□□□□□ -0.69
TGIF1-223	ENST00000618001	IARS	P41252	1262 aa	Known RBP	10.71	□□□□□ -0.69
TGIF1-223	ENST00000618001	CRAMP1	Q96RY5	1269 aa		10.71	□□□□□ -0.69
TGIF1-223	ENST00000618001	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.71	□□□□□ -0.69
TGIF1-223	ENST00000618001	TSPYL4	Q9UJ04	414 aa		10.71	□□□□□ -0.69
TGIF1-223	ENST00000618001	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.71	□□□□□ -0.69
TGIF1-223	ENST00000618001	ZNF541	Q9H0D2	1346 aa		10.71	□□□□□ -0.69
TGIF1-223	ENST00000618001	GLIPR1L2	Q4G1C9	344 aa		10.71	□□□□□ -0.69
TGIF1-223	ENST00000618001	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.71	□□□□□ -0.69
TGIF1-223	ENST00000618001	COL4A5	P29400	1685 aa		10.71	□□□□□ -0.7
TGIF1-223	ENST00000618001	GTF2E1	P29083	439 aa	Predicted RBP	10.71	□□□□□ -0.7
TGIF1-223	ENST00000618001	SLC10A5	Q5PT55	438 aa		10.71	□□□□□ -0.7
TGIF1-223	ENST00000618001	SUSD4	Q5VX71	490 aa		10.71	□□□□□ -0.7
TGIF1-223	ENST00000618001	MYL6B	P14649	208 aa		10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	TMPO	P42166	694 aa	Known RBP	10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	RIPK4	P57078	832 aa		10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	GPC2	Q8N158	579 aa		10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	SYNE4	Q8N205	404 aa		10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	VPS33B	Q9H267	617 aa		10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	RRP7A	Q9Y3A4	280 aa	Known RBP	10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	PPP1R42	Q7Z4L9	355 aa		10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	NUTM1	Q86Y26	1132 aa		10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	RBM17	Q96I25	401 aa	Known RBP	10.7	□□□□□ -0.7
TGIF1-223	ENST00000618001	LAMB2	P55268	1798 aa		10.69	□□□□□ -0.7
TGIF1-223	ENST00000618001	FAM177B	A6PVY3	158 aa		10.69	□□□□□ -0.7
TGIF1-223	ENST00000618001	OLFM4	Q6UX06	510 aa		10.69	□□□□□ -0.7
TGIF1-223	ENST00000618001	RPGR	Q92834	1020 aa	Known RBP	10.69	□□□□□ -0.7
TGIF1-223	ENST00000618001	ZBTB3	Q9H5J0	574 aa		10.69	□□□□□ -0.7
TGIF1-223	ENST00000618001	HACL1	Q9UJ83	578 aa		10.69	□□□□□ -0.7
TGIF1-223	ENST00000618001	POTEI	P0CG38	1075 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	POTEJ	P0CG39	1038 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	PNMA8A	Q86V59	439 aa	Predicted RBP	10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	NGEF	Q8N5V2	710 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	LRRC37A	A6NMS7	1700 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	LTBP1	Q14766	1721 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	CNTNAP1	P78357	1384 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	CHL1	O00533	1208 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	HOXB7	P09629	217 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	HSP90AB3P	Q58FF7	597 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	PPEF1	O14829	653 aa	Predicted RBP	10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	GPT	P24298	496 aa		10.68	□□□□□ -0.7
TGIF1-223	ENST00000618001	ITGBL1	O95965	494 aa	Predicted RBP	10.67	□□□□□ -0.7
TGIF1-223	ENST00000618001	UTP14A	Q9BVJ6	771 aa	Known RBP	10.67	□□□□□ -0.7
TGIF1-223	ENST00000618001	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.67	□□□□□ -0.7
TGIF1-223	ENST00000618001	PCNT	O95613	3336 aa		10.67	□□□□□ -0.7
TGIF1-223	ENST00000618001	THSD7B	Q9C0I4	1608 aa		10.67	□□□□□ -0.7
TGIF1-223	ENST00000618001	EPHX2	P34913	555 aa		10.67	□□□□□ -0.7
TGIF1-223	ENST00000618001	MIER1	Q8N108	512 aa		10.67	□□□□□ -0.7
TGIF1-223	ENST00000618001	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
TGIF1-223	ENST00000618001	PROSER3	Q2NL68	480 aa		10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	C3orf67	Q6ZVT6	689 aa		10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	JDP2	Q8WYK2	163 aa		10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	RUNDC1	Q96C34	613 aa		10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	NLRP3	Q96P20	1036 aa		10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	TRIM35	Q9UPQ4	493 aa		10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	ATP6V0A2	Q9Y487	856 aa		10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	DDX60	Q8IY21	1712 aa	Known RBP	10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	HSPA1A	P0DMV8	641 aa	Known RBP	10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	HSPA1B	P0DMV9	641 aa	Known RBP	10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	NLRP10	Q86W26	655 aa		10.66	□□□□□ -0.7
TGIF1-223	ENST00000618001	EIF6	P56537	245 aa	Known RBP	10.65	□□□□□ -0.7
TGIF1-223	ENST00000618001	ABCC4	O15439	1325 aa		10.65	□□□□□ -0.7
TGIF1-223	ENST00000618001	TMEM88B	A6NKF7	163 aa		10.65	□□□□□ -0.71
TGIF1-223	ENST00000618001	TCIRG1	Q13488	830 aa		10.65	□□□□□ -0.71
TGIF1-223	ENST00000618001	BBOX1	O75936	387 aa		10.64	□□□□□ -0.71
TGIF1-223	ENST00000618001	EIF2S2	P20042	333 aa	Known RBP	10.64	□□□□□ -0.71
TGIF1-223	ENST00000618001	COPS6	Q7L5N1	327 aa		10.64	□□□□□ -0.71
TGIF1-223	ENST00000618001	SUPT20H	Q8NEM7	779 aa		10.64	□□□□□ -0.71
TGIF1-223	ENST00000618001	DUOX1	Q9NRD9	1551 aa		10.64	□□□□□ -0.71
TGIF1-223	ENST00000618001	CDHR2	Q9BYE9	1310 aa		10.64	□□□□□ -0.71
TGIF1-223	ENST00000618001	SCNN1D	P51172	638 aa		10.64	□□□□□ -0.71
TGIF1-223	ENST00000618001	TMC4	Q7Z404	712 aa		10.64	□□□□□ -0.71
TGIF1-223	ENST00000618001	XAGE3	Q8WTP9	111 aa		10.64	□□□□□ -0.71
TGIF1-223	ENST00000618001	SP8	Q8IXZ3	490 aa		10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	LARGE2	Q8N3Y3	721 aa		10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	SH3TC1	Q8TE82	1336 aa		10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	RASSF10	A6NK89	507 aa		10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	USP50	Q70EL3	339 aa	Predicted RBP	10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	CFAP44	Q96MT7	982 aa		10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	WDR43	Q15061	677 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	EAPP	Q56P03	285 aa	Predicted RBP	10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	NIM1K	Q8IY84	436 aa		10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	PLBD2	Q8NHP8	589 aa		10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	TMX4	Q9H1E5	349 aa	Predicted RBP	10.63	□□□□□ -0.71
TGIF1-223	ENST00000618001	ANXA1	P04083	346 aa		10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	LMOD1	P29536	600 aa	Predicted RBP	10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	GRAP	Q13588	217 aa		10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	CNTROB	Q8N137	903 aa		10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	GRAPL	Q8TC17	118 aa	Predicted RBP	10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	ISCA1	Q9BUE6	129 aa		10.62	□□□□□ -0.71

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