RNA–Protein interactions for RNA: ENST00000616760.1

CLIC1-210, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIC1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-210ENST00000616760 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
CLIC1-210ENST00000616760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
CLIC1-210ENST00000616760 PHKG2P15735 406 aa13.1□□□□□ -0.31
CLIC1-210ENST00000616760 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
CLIC1-210ENST00000616760 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
CLIC1-210ENST00000616760 LRCH3Q96II8 777 aa13.1□□□□□ -0.31
CLIC1-210ENST00000616760 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.1□□□□□ -0.31
CLIC1-210ENST00000616760 TMOD3Q9NYL9 352 aa13.1□□□□□ -0.31
CLIC1-210ENST00000616760 GOLGB1Q14789 3259 aaKnown RBP13.1□□□□□ -0.31
CLIC1-210ENST00000616760 LOC102724428A0A0B4J2F2 783 aa13.09□□□□□ -0.31
CLIC1-210ENST00000616760 GNPATO15228 680 aa13.09□□□□□ -0.31
CLIC1-210ENST00000616760 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
CLIC1-210ENST00000616760 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
CLIC1-210ENST00000616760 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
CLIC1-210ENST00000616760 SIK1P57059 783 aa13.09□□□□□ -0.31
CLIC1-210ENST00000616760 PIGBQ92521 554 aa13.09□□□□□ -0.31
CLIC1-210ENST00000616760 ADGRG1Q9Y653 693 aa13.09□□□□□ -0.31
CLIC1-210ENST00000616760 NPC1L1Q9UHC9 1359 aa13.08□□□□□ -0.31
CLIC1-210ENST00000616760 HSPA6P17066 643 aa13.08□□□□□ -0.32
CLIC1-210ENST00000616760 CC2D1BQ5T0F9 858 aaKnown RBP13.08□□□□□ -0.32
CLIC1-210ENST00000616760 YTHDC1Q96MU7 727 aaKnown RBP13.08□□□□□ -0.32
CLIC1-210ENST00000616760 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
CLIC1-210ENST00000616760 IL13P35225 146 aa13.07□□□□□ -0.32
CLIC1-210ENST00000616760 MTHFSP49914 203 aa13.07□□□□□ -0.32
CLIC1-210ENST00000616760 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
CLIC1-210ENST00000616760 ZNF530Q6P9A1 599 aaPredicted RBP13.07□□□□□ -0.32
CLIC1-210ENST00000616760 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
CLIC1-210ENST00000616760 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
CLIC1-210ENST00000616760 C4AP0C0L4 1744 aa13.06□□□□□ -0.32
CLIC1-210ENST00000616760 FECHP22830 423 aa13.06□□□□□ -0.32
CLIC1-210ENST00000616760 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
CLIC1-210ENST00000616760 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
CLIC1-210ENST00000616760 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLIC1-210ENST00000616760 LINC00116Q8NCU8 138 aa13.06□□□□□ -0.32
CLIC1-210ENST00000616760 RBM46Q8TBY0 533 aaKnown RBP13.06□□□□□ -0.32
CLIC1-210ENST00000616760 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
CLIC1-210ENST00000616760 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
CLIC1-210ENST00000616760 ARFGEF1Q9Y6D6 1849 aa13.05□□□□□ -0.32
CLIC1-210ENST00000616760 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
CLIC1-210ENST00000616760 FAM161AQ3B820 660 aa13.05□□□□□ -0.32
CLIC1-210ENST00000616760 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
CLIC1-210ENST00000616760 KDRP35968 1356 aa13.05□□□□□ -0.32
CLIC1-210ENST00000616760 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
CLIC1-210ENST00000616760 AMIGO3Q86WK7 504 aa13.04□□□□□ -0.32
CLIC1-210ENST00000616760 ZNF526Q8TF50 670 aaPredicted RBP13.04□□□□□ -0.32
CLIC1-210ENST00000616760 TSR3Q9UJK0 312 aaKnown RBP13.04□□□□□ -0.32
CLIC1-210ENST00000616760 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
CLIC1-210ENST00000616760 CEP350Q5VT06 3117 aa13.04□□□□□ -0.32
CLIC1-210ENST00000616760 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
CLIC1-210ENST00000616760 WBP1LQ9NX94 342 aa13.03□□□□□ -0.32
CLIC1-210ENST00000616760 HPS5Q9UPZ3 1129 aa13.03□□□□□ -0.32
CLIC1-210ENST00000616760 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
CLIC1-210ENST00000616760 PXDNLA1KZ92 1463 aa13.03□□□□□ -0.32
CLIC1-210ENST00000616760 MMP10P09238 476 aa13.02□□□□□ -0.33
CLIC1-210ENST00000616760 CABP4P57796 275 aa13.02□□□□□ -0.33
CLIC1-210ENST00000616760 TGFB2P61812 414 aa13.02□□□□□ -0.33
CLIC1-210ENST00000616760 ITPK1Q13572 414 aa13.02□□□□□ -0.33
CLIC1-210ENST00000616760 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.33
CLIC1-210ENST00000616760 TRAPPC3LQ5T215 181 aa13.01□□□□□ -0.33
CLIC1-210ENST00000616760 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
CLIC1-210ENST00000616760 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
CLIC1-210ENST00000616760 C10orf71Q711Q0 1435 aa13.01□□□□□ -0.33
CLIC1-210ENST00000616760 MYH14Q7Z406 1995 aaKnown RBP13□□□□□ -0.33
CLIC1-210ENST00000616760 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
CLIC1-210ENST00000616760 SCN11AQ9UI33 1791 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 KDM6AO15550 1401 aaPredicted RBP13□□□□□ -0.33
CLIC1-210ENST00000616760 CNTNAP4Q9C0A0 1308 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 OATP04181 439 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 HMOX1P09601 288 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 DNAJB2P25686 324 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 APLP1P51693 650 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 RALBP1Q15311 655 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 SWT1Q5T5J6 900 aaKnown RBP13□□□□□ -0.33
CLIC1-210ENST00000616760 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
CLIC1-210ENST00000616760 NYAP1Q6ZVC0 841 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 SMIM5Q71RC9 77 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 CFAP53Q96M91 514 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 WWC3Q9ULE0 1092 aa13□□□□□ -0.33
CLIC1-210ENST00000616760 RFC4P35249 363 aa12.99□□□□□ -0.33
CLIC1-210ENST00000616760 AKAP4Q5JQC9 854 aa12.99□□□□□ -0.33
CLIC1-210ENST00000616760 PXYLP1Q8TE99 480 aa12.99□□□□□ -0.33
CLIC1-210ENST00000616760 RCCD1A6NED2 376 aa12.98□□□□□ -0.33
CLIC1-210ENST00000616760 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
CLIC1-210ENST00000616760 PPP4CP60510 307 aa12.98□□□□□ -0.33
CLIC1-210ENST00000616760 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
CLIC1-210ENST00000616760 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
CLIC1-210ENST00000616760 TJP1Q07157 1748 aa12.98□□□□□ -0.33
CLIC1-210ENST00000616760 TNRC6CQ9HCJ0 1690 aaKnown RBP12.97□□□□□ -0.33
CLIC1-210ENST00000616760 RPS6KA4O75676 772 aa12.97□□□□□ -0.33
CLIC1-210ENST00000616760 METTL3Q86U44 580 aaKnown RBP12.97□□□□□ -0.33
CLIC1-210ENST00000616760 TMEM134Q9H6X4 195 aa12.97□□□□□ -0.33
CLIC1-210ENST00000616760 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
CLIC1-210ENST00000616760 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
CLIC1-210ENST00000616760 WDR90Q96KV7 1748 aa12.96□□□□□ -0.33
CLIC1-210ENST00000616760 RNF40O75150 1001 aa12.96□□□□□ -0.33
CLIC1-210ENST00000616760 NFATC2IPQ8NCF5 419 aa12.96□□□□□ -0.33
CLIC1-210ENST00000616760 NUDCQ9Y266 331 aa12.96□□□□□ -0.33
CLIC1-210ENST00000616760 TOMM70O94826 608 aa12.95□□□□□ -0.34
CLIC1-210ENST00000616760 GYS1P13807 737 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms