RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 ERC1Q8IUD2 1116 aa16.72■□□□□ 0.27
CACNA1C-231ENST00000616390 IFNL2Q8IZJ0 200 aa16.72■□□□□ 0.27
CACNA1C-231ENST00000616390 EDC3Q96F86 508 aaKnown RBP16.72■□□□□ 0.27
CACNA1C-231ENST00000616390 RBSNQ9H1K0 784 aa16.72■□□□□ 0.27
CACNA1C-231ENST00000616390 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
CACNA1C-231ENST00000616390 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.27
CACNA1C-231ENST00000616390 NEURL1BA8MQ27 555 aa16.71■□□□□ 0.27
CACNA1C-231ENST00000616390 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
CACNA1C-231ENST00000616390 LARGE1O95461 756 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 RNF214Q8ND24 703 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 TMEM94Q12767 1356 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 ESPNB1AK53 854 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 CYP27B1O15528 508 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 GADD45BO75293 160 aaPredicted RBP16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 UBE3BQ7Z3V4 1068 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 CCDC83Q8IWF9 413 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 FSD1Q9BTV5 496 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 HDAC5Q9UQL6 1122 aa16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
CACNA1C-231ENST00000616390 NMIQ13287 307 aaPredicted RBP16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 GCKRQ14397 625 aa16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 CABP4P57796 275 aa16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 EVI5LQ96CN4 794 aa16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 TRPM3Q9HCF6 1732 aaPredicted RBP16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 ADAMTSL3P82987 1691 aa16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 PHRF1Q9P1Y6 1649 aaKnown RBP16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 MEGF6O75095 1541 aa16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 RRP9O43818 475 aaKnown RBP16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 HSPA2P54652 639 aa16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
CACNA1C-231ENST00000616390 ZNF445P59923 1031 aa16.68■□□□□ 0.26
CACNA1C-231ENST00000616390 COL9A3Q14050 684 aaPredicted RBP16.68■□□□□ 0.26
CACNA1C-231ENST00000616390 PDRG1Q9NUG6 133 aa16.68■□□□□ 0.26
CACNA1C-231ENST00000616390 USP48Q86UV5 1035 aa16.68■□□□□ 0.26
CACNA1C-231ENST00000616390 TTC14Q96N46 770 aa16.68■□□□□ 0.26
CACNA1C-231ENST00000616390 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
CACNA1C-231ENST00000616390 SNRPA1P09661 255 aaKnown RBP16.67■□□□□ 0.26
CACNA1C-231ENST00000616390 NECAB1Q8N987 351 aa16.67■□□□□ 0.26
CACNA1C-231ENST00000616390 METTL22Q9BUU2 404 aaPredicted RBP16.67■□□□□ 0.26
CACNA1C-231ENST00000616390 RBM8AQ9Y5S9 174 aaKnown RBP16.67■□□□□ 0.26
CACNA1C-231ENST00000616390 WDR33Q9C0J8 1336 aaKnown RBP16.67■□□□□ 0.26
CACNA1C-231ENST00000616390 CHGBP05060 677 aa16.67■□□□□ 0.26
CACNA1C-231ENST00000616390 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
CACNA1C-231ENST00000616390 A0A0D9SFI3 127 aa16.66■□□□□ 0.26
CACNA1C-231ENST00000616390 HSP90AA2PQ14568 343 aaPredicted RBP16.66■□□□□ 0.26
CACNA1C-231ENST00000616390 PRDM4Q9UKN5 801 aa16.66■□□□□ 0.26
CACNA1C-231ENST00000616390 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
CACNA1C-231ENST00000616390 C5P01031 1676 aa16.66■□□□□ 0.26
CACNA1C-231ENST00000616390 A0A087WZG4 1122 aa16.66■□□□□ 0.26
CACNA1C-231ENST00000616390 CCDC173Q0VFZ6 552 aa16.66■□□□□ 0.26
CACNA1C-231ENST00000616390 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
CACNA1C-231ENST00000616390 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
CACNA1C-231ENST00000616390 TFCP2Q12800 502 aa16.65■□□□□ 0.26
CACNA1C-231ENST00000616390 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
CACNA1C-231ENST00000616390 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
CACNA1C-231ENST00000616390 CYP46A1Q9Y6A2 500 aa16.65■□□□□ 0.26
CACNA1C-231ENST00000616390 SIPA1L3O60292 1781 aaPredicted RBP16.65■□□□□ 0.26
CACNA1C-231ENST00000616390 SYT1P21579 422 aa16.65■□□□□ 0.26
CACNA1C-231ENST00000616390 DCAF5Q96JK2 942 aa16.65■□□□□ 0.26
CACNA1C-231ENST00000616390 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
CACNA1C-231ENST00000616390 FIBPO43427 364 aa16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 GJB2P29033 226 aa16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 CLCN1P35523 988 aa16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 TAF6LQ9Y6J9 622 aa16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 KAT6BQ8WYB5 2073 aa16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 VPS37CA5D8V6 355 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 STX6O43752 255 aa16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 LRSAM1Q6UWE0 723 aa16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-231ENST00000616390 UTYO14607 1347 aa16.63■□□□□ 0.25
CACNA1C-231ENST00000616390 OVOS2A0A0G2JMS6 1433 aa16.63■□□□□ 0.25
CACNA1C-231ENST00000616390 MBD3O95983 291 aa16.63■□□□□ 0.25
CACNA1C-231ENST00000616390 TOM1L2Q6ZVM7 507 aa16.63■□□□□ 0.25
CACNA1C-231ENST00000616390 ZNF589Q86UQ0 364 aaPredicted RBP16.63■□□□□ 0.25
CACNA1C-231ENST00000616390 SCN11AQ9UI33 1791 aa16.63■□□□□ 0.25
CACNA1C-231ENST00000616390 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
CACNA1C-231ENST00000616390 TMEM132AQ24JP5 1023 aa16.63■□□□□ 0.25
CACNA1C-231ENST00000616390 MST1RQ04912 1400 aa16.63■□□□□ 0.25
CACNA1C-231ENST00000616390 EPB41L2O43491 1005 aaKnown RBP16.62■□□□□ 0.25
CACNA1C-231ENST00000616390 ZSCAN22P10073 491 aaPredicted RBP16.62■□□□□ 0.25
CACNA1C-231ENST00000616390 STK3Q13188 491 aa16.62■□□□□ 0.25
CACNA1C-231ENST00000616390 ME3Q16798 604 aa16.62■□□□□ 0.25
CACNA1C-231ENST00000616390 NEUROD6Q96NK8 337 aa16.62■□□□□ 0.25
CACNA1C-231ENST00000616390 LMBR1LQ6UX01 489 aa16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 CCDC129Q6ZRS4 1044 aa16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 IL17RAQ96F46 866 aa16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 ZBTB3Q9H5J0 574 aa16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 DBNLQ9UJU6 430 aaKnown RBP16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 SLC27A2O14975 620 aa16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 A1BGP04217 495 aa16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 DBNDD2Q9BQY9 259 aa16.61■□□□□ 0.25
CACNA1C-231ENST00000616390 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms