RNA–Protein interactions for RNA: ENST00000616230.1

PCDHGC3-203, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-203ENST00000616230 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
PCDHGC3-203ENST00000616230 SENP3-EIF4A1A0A087X0R7 540 aa15.94■□□□□ 0.14
PCDHGC3-203ENST00000616230 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
PCDHGC3-203ENST00000616230 HSP90AB3PQ58FF7 597 aa15.94■□□□□ 0.14
PCDHGC3-203ENST00000616230 DBF4Q9UBU7 674 aaPredicted RBP15.94■□□□□ 0.14
PCDHGC3-203ENST00000616230 ALDH1B1P30837 517 aa15.93■□□□□ 0.14
PCDHGC3-203ENST00000616230 TAOK3Q9H2K8 898 aa15.93■□□□□ 0.14
PCDHGC3-203ENST00000616230 DDX60Q8IY21 1712 aaKnown RBP15.92■□□□□ 0.14
PCDHGC3-203ENST00000616230 CCDC93Q567U6 631 aa15.92■□□□□ 0.14
PCDHGC3-203ENST00000616230 RNF123Q5XPI4 1314 aa15.92■□□□□ 0.14
PCDHGC3-203ENST00000616230 WDR90Q96KV7 1748 aa15.91■□□□□ 0.14
PCDHGC3-203ENST00000616230 TCIRG1Q13488 830 aa15.91■□□□□ 0.14
PCDHGC3-203ENST00000616230 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
PCDHGC3-203ENST00000616230 NLRP10Q86W26 655 aa15.91■□□□□ 0.14
PCDHGC3-203ENST00000616230 WWC1Q8IX03 1113 aa15.91■□□□□ 0.14
PCDHGC3-203ENST00000616230 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
PCDHGC3-203ENST00000616230 UTP14AQ9BVJ6 771 aaKnown RBP15.91■□□□□ 0.14
PCDHGC3-203ENST00000616230 HYPKQ9NX55 129 aa15.91■□□□□ 0.14
PCDHGC3-203ENST00000616230 SNED1Q8TER0 1413 aa15.91■□□□□ 0.14
PCDHGC3-203ENST00000616230 GLTPD2A6NH11 291 aa15.9■□□□□ 0.14
PCDHGC3-203ENST00000616230 TOMM70O94826 608 aa15.9■□□□□ 0.14
PCDHGC3-203ENST00000616230 HOXA10P31260 410 aaPredicted RBP15.9■□□□□ 0.14
PCDHGC3-203ENST00000616230 SLC10A5Q5PT55 438 aa15.9■□□□□ 0.14
PCDHGC3-203ENST00000616230 ANKRD13DQ6ZTN6 518 aa15.9■□□□□ 0.14
PCDHGC3-203ENST00000616230 C8orf58Q8NAV2 365 aa15.9■□□□□ 0.14
PCDHGC3-203ENST00000616230 CEP350Q5VT06 3117 aa15.9■□□□□ 0.14
PCDHGC3-203ENST00000616230 ELL2O00472 640 aaPredicted RBP15.89■□□□□ 0.13
PCDHGC3-203ENST00000616230 FKBP4Q02790 459 aaKnown RBP eCLIP15.89■□□□□ 0.13
PCDHGC3-203ENST00000616230 OLFM4Q6UX06 510 aa15.89■□□□□ 0.13
PCDHGC3-203ENST00000616230 C3orf67Q6ZVT6 689 aa15.89■□□□□ 0.13
PCDHGC3-203ENST00000616230 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
PCDHGC3-203ENST00000616230 NLRP3Q96P20 1036 aa15.89■□□□□ 0.13
PCDHGC3-203ENST00000616230 RRAGCQ9HB90 399 aa15.89■□□□□ 0.13
PCDHGC3-203ENST00000616230 RTKN2Q8IZC4 609 aa15.88■□□□□ 0.13
PCDHGC3-203ENST00000616230 RBM17Q96I25 401 aaKnown RBP15.88■□□□□ 0.13
PCDHGC3-203ENST00000616230 CRAMP1Q96RY5 1269 aa15.88■□□□□ 0.13
PCDHGC3-203ENST00000616230 IL16Q14005 1332 aa15.88■□□□□ 0.13
PCDHGC3-203ENST00000616230 HSPA6P17066 643 aa15.87■□□□□ 0.13
PCDHGC3-203ENST00000616230 TSPYL6Q8N831 410 aa15.87■□□□□ 0.13
PCDHGC3-203ENST00000616230 TSR2Q969E8 191 aaKnown RBP15.87■□□□□ 0.13
PCDHGC3-203ENST00000616230 ISCA1Q9BUE6 129 aa15.87■□□□□ 0.13
PCDHGC3-203ENST00000616230 PHAXQ9H814 394 aaKnown RBP15.87■□□□□ 0.13
PCDHGC3-203ENST00000616230 TAF1P21675 1872 aa15.86■□□□□ 0.13
PCDHGC3-203ENST00000616230 CCDC30Q5VVM6 783 aa15.86■□□□□ 0.13
PCDHGC3-203ENST00000616230 DPY19L2Q6NUT2 758 aa15.86■□□□□ 0.13
PCDHGC3-203ENST00000616230 C16orf71Q8IYS4 520 aaPredicted RBP15.86■□□□□ 0.13
PCDHGC3-203ENST00000616230 SYNE4Q8N205 404 aa15.86■□□□□ 0.13
PCDHGC3-203ENST00000616230 RBM46Q8TBY0 533 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-203ENST00000616230 CHMP4AQ9BY43 222 aa15.86■□□□□ 0.13
PCDHGC3-203ENST00000616230 TRMT112Q9UI30 125 aaKnown RBP15.86■□□□□ 0.13
PCDHGC3-203ENST00000616230 SH3TC1Q8TE82 1336 aa15.86■□□□□ 0.13
PCDHGC3-203ENST00000616230 PPEF1O14829 653 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-203ENST00000616230 GOLGA2Q08379 1002 aa15.85■□□□□ 0.13
PCDHGC3-203ENST00000616230 CC2D2BQ6DHV5 1058 aa15.85■□□□□ 0.13
PCDHGC3-203ENST00000616230 PSMD1Q99460 953 aa15.85■□□□□ 0.13
PCDHGC3-203ENST00000616230 ZNF277Q9NRM2 450 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-203ENST00000616230 CACNA1FO60840 1977 aa15.85■□□□□ 0.13
PCDHGC3-203ENST00000616230 ATP5J2-PTCD1G3V325 749 aa15.84■□□□□ 0.13
PCDHGC3-203ENST00000616230 HCLS1P14317 486 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-203ENST00000616230 VEGFAP15692 232 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-203ENST00000616230 TRIM28Q13263 835 aaKnown RBP15.84■□□□□ 0.13
PCDHGC3-203ENST00000616230 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
PCDHGC3-203ENST00000616230 ABCC4O15439 1325 aa15.84■□□□□ 0.13
PCDHGC3-203ENST00000616230 LRRC37AA6NMS7 1700 aa15.83■□□□□ 0.13
PCDHGC3-203ENST00000616230 SCN4AP35499 1836 aa15.83■□□□□ 0.12
PCDHGC3-203ENST00000616230 POTECB2RU33 542 aa15.83■□□□□ 0.12
PCDHGC3-203ENST00000616230 GRIPAP1Q4V328 841 aa15.83■□□□□ 0.12
PCDHGC3-203ENST00000616230 SLC51AQ86UW1 340 aa15.83■□□□□ 0.12
PCDHGC3-203ENST00000616230 ZNF428Q96B54 188 aa15.83■□□□□ 0.12
PCDHGC3-203ENST00000616230 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
PCDHGC3-203ENST00000616230 FSTL1Q12841 308 aa15.82■□□□□ 0.12
PCDHGC3-203ENST00000616230 TWISTNBQ3B726 338 aaPredicted RBP15.82■□□□□ 0.12
PCDHGC3-203ENST00000616230 WDR63Q8IWG1 891 aa15.82■□□□□ 0.12
PCDHGC3-203ENST00000616230 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
PCDHGC3-203ENST00000616230 SALL2Q9Y467 1007 aaPredicted RBP15.82■□□□□ 0.12
PCDHGC3-203ENST00000616230 FANCIQ9NVI1 1328 aa15.82■□□□□ 0.12
PCDHGC3-203ENST00000616230 COL4A5P29400 1685 aa15.82■□□□□ 0.12
PCDHGC3-203ENST00000616230 DDNO94850 711 aaPredicted RBP15.81■□□□□ 0.12
PCDHGC3-203ENST00000616230 FAM89AQ96GI7 184 aa15.81■□□□□ 0.12
PCDHGC3-203ENST00000616230 ATP6V0A2Q9Y487 856 aa15.81■□□□□ 0.12
PCDHGC3-203ENST00000616230 TCERG1O14776 1098 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-203ENST00000616230 DDX58O95786 925 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-203ENST00000616230 DDX46Q7L014 1031 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-203ENST00000616230 MYD88Q99836 296 aa15.8■□□□□ 0.12
PCDHGC3-203ENST00000616230 COL4A1P02462 1669 aa15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 ZNF541Q9H0D2 1346 aa15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 FZD9O00144 591 aa15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 BBOX1O75936 387 aa15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 GRAPQ13588 217 aa15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 ZBTB38Q8NAP3 1195 aaPredicted RBP15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 CCDC191Q8NCU4 936 aa15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 SMC1BQ8NDV3 1235 aa15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 GRAPLQ8TC17 118 aaPredicted RBP15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 METTL22Q9BUU2 404 aaPredicted RBP15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 STK31Q9BXU1 1019 aa15.79■□□□□ 0.12
PCDHGC3-203ENST00000616230 MYH3P11055 1940 aa15.78■□□□□ 0.12
PCDHGC3-203ENST00000616230 IRS4O14654 1257 aaPredicted RBP15.78■□□□□ 0.12
PCDHGC3-203ENST00000616230 APLP1P51693 650 aa15.78■□□□□ 0.12
PCDHGC3-203ENST00000616230 SF3B3Q15393 1217 aaKnown RBP15.78■□□□□ 0.12
PCDHGC3-203ENST00000616230 SP8Q8IXZ3 490 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms