RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 SMC3Q9UQE7 1217 aa9.31□□□□□ -0.92
MID1-212ENST00000616003 LRRFIP2Q9Y608 721 aaKnown RBP9.31□□□□□ -0.92
MID1-212ENST00000616003 CCDC171Q6TFL3 1326 aa9.31□□□□□ -0.92
MID1-212ENST00000616003 FIBPO43427 364 aa9.3□□□□□ -0.92
MID1-212ENST00000616003 HTATSF1O43719 755 aaKnown RBP9.3□□□□□ -0.92
MID1-212ENST00000616003 RUFY3Q7L099 469 aa9.3□□□□□ -0.92
MID1-212ENST00000616003 MSL3Q8N5Y2 521 aaKnown RBP9.3□□□□□ -0.92
MID1-212ENST00000616003 PI4K2BQ8TCG2 481 aa9.3□□□□□ -0.92
MID1-212ENST00000616003 LSG1Q9H089 658 aaKnown RBP9.3□□□□□ -0.92
MID1-212ENST00000616003 KCNF1Q9H3M0 494 aa9.3□□□□□ -0.92
MID1-212ENST00000616003 SH2B1Q9NRF2 756 aaPredicted RBP9.3□□□□□ -0.92
MID1-212ENST00000616003 IGSF1Q8N6C5 1336 aa9.3□□□□□ -0.92
MID1-212ENST00000616003 USP42Q9H9J4 1324 aaKnown RBP9.3□□□□□ -0.92
MID1-212ENST00000616003 PTPRUQ92729 1446 aa9.3□□□□□ -0.92
MID1-212ENST00000616003 MED1Q15648 1581 aaPredicted RBP9.3□□□□□ -0.92
MID1-212ENST00000616003 UBTFL1P0CB47 393 aaPredicted RBP9.29□□□□□ -0.92
MID1-212ENST00000616003 CCDC192P0DO97 292 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 AK2P54819 239 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 CNTROBQ8N137 903 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 C17orf53Q8N3J3 647 aaPredicted RBP9.29□□□□□ -0.92
MID1-212ENST00000616003 ANKRD7Q92527 254 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 ARHGEF1Q92888 912 aaKnown RBP9.29□□□□□ -0.92
MID1-212ENST00000616003 NCKAP5LQ9HCH0 1330 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 DIP2AQ14689 1571 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 NWD1Q149M9 1564 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 CTIFO43310 598 aaKnown RBP9.29□□□□□ -0.92
MID1-212ENST00000616003 TPD52L2O43399 206 aaKnown RBP9.29□□□□□ -0.92
MID1-212ENST00000616003 POLA2Q14181 598 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 MTHFSDQ2M296 383 aaKnown RBP9.29□□□□□ -0.92
MID1-212ENST00000616003 HSP90AB2PQ58FF8 381 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 RBM26Q5T8P6 1007 aaKnown RBP9.29□□□□□ -0.92
MID1-212ENST00000616003 CHMP4CQ96CF2 233 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 MTA3Q9BTC8 594 aa9.29□□□□□ -0.92
MID1-212ENST00000616003 ROBO2Q9HCK4 1378 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 ELP1O95163 1332 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 TTC21AQ8NDW8 1320 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 GOLGA6CA6NDK9 693 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 GOLGA6BA6NDN3 693 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 GOLGA6DP0CG33 693 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 SCP2P22307 547 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 SYCP1Q15431 976 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 VPS53Q5VIR6 699 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 DNAJC14Q6Y2X3 702 aaPredicted RBP9.28□□□□□ -0.92
MID1-212ENST00000616003 TXNDC2Q86VQ3 553 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 PDCL2Q8N4E4 241 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 FAM200AQ8TCP9 573 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 KIF1BPQ96EK5 621 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 BABAM1Q9NWV8 329 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 GOLGA6AQ9NYA3 693 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 FEZ2Q9UHY8 353 aaPredicted RBP9.28□□□□□ -0.92
MID1-212ENST00000616003 PYCARDQ9ULZ3 195 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 MTMR6Q9Y217 621 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 CEP83Q9Y592 693 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 NUB1Q9Y5A7 615 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 UBR1Q8IWV7 1749 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 DIP2BQ9P265 1576 aa9.28□□□□□ -0.92
MID1-212ENST00000616003 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.92
MID1-212ENST00000616003 PLEKHG3A1L390 1219 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 GIMAP6Q6P9H5 292 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 TSC1Q92574 1164 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 ZSCAN31Q96LW9 406 aaPredicted RBP9.27□□□□□ -0.93
MID1-212ENST00000616003 TM6SF1Q9BZW5 370 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 HYPKQ9NX55 129 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 KDM3BQ7LBC6 1761 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 ACEP12821 1306 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.93
MID1-212ENST00000616003 FOXO3O43524 673 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 DHX16O60231 1041 aaKnown RBP9.27□□□□□ -0.93
MID1-212ENST00000616003 ERCC3P19447 782 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 CASTP20810 708 aaKnown RBP9.27□□□□□ -0.93
MID1-212ENST00000616003 GJB2P29033 226 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 RASEFQ8IZ41 740 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 RHPN1Q8TCX5 695 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 JARID2Q92833 1246 aaPredicted RBP9.27□□□□□ -0.93
MID1-212ENST00000616003 KCNB2Q92953 911 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 USP44Q9H0E7 712 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 IL1RAPL2Q9NP60 686 aa9.27□□□□□ -0.93
MID1-212ENST00000616003 MARF1Q9Y4F3 1742 aaKnown RBP9.26□□□□□ -0.93
MID1-212ENST00000616003 AP5Z1O43299 807 aa9.26□□□□□ -0.93
MID1-212ENST00000616003 LARGE1O95461 756 aa9.26□□□□□ -0.93
MID1-212ENST00000616003 IRX5P78411 483 aaPredicted RBP9.26□□□□□ -0.93
MID1-212ENST00000616003 DNM1Q05193 864 aaKnown RBP9.26□□□□□ -0.93
MID1-212ENST00000616003 FOXD4Q12950 439 aaPredicted RBP9.26□□□□□ -0.93
MID1-212ENST00000616003 MAP3K11Q16584 847 aa9.26□□□□□ -0.93
MID1-212ENST00000616003 GORABQ5T7V8 394 aa9.26□□□□□ -0.93
MID1-212ENST00000616003 EP400NLQ6ZTU2 488 aa9.26□□□□□ -0.93
MID1-212ENST00000616003 DDX46Q7L014 1031 aaKnown RBP9.26□□□□□ -0.93
MID1-212ENST00000616003 RUFY2Q8WXA3 655 aa9.26□□□□□ -0.93
MID1-212ENST00000616003 NUP62CLQ9H1M0 184 aa9.26□□□□□ -0.93
MID1-212ENST00000616003 MARCH6O60337 910 aa9.25□□□□□ -0.93
MID1-212ENST00000616003 GLRX3O76003 335 aaKnown RBP9.25□□□□□ -0.93
MID1-212ENST00000616003 KRT85P78386 507 aa9.25□□□□□ -0.93
MID1-212ENST00000616003 ATP2B3Q16720 1220 aa9.25□□□□□ -0.93
MID1-212ENST00000616003 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.25□□□□□ -0.93
MID1-212ENST00000616003 NUTM1Q86Y26 1132 aa9.25□□□□□ -0.93
MID1-212ENST00000616003 CCDC83Q8IWF9 413 aa9.25□□□□□ -0.93
MID1-212ENST00000616003 FEZ1Q99689 392 aa9.25□□□□□ -0.93
MID1-212ENST00000616003 TSPYL1Q9H0U9 437 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms