RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 MINDY4BA8MYZ0 360 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 KIF20AO95235 890 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 ATP8B2P98198 1209 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 MFSD6Q6ZSS7 791 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 CUL5Q93034 780 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 KRT23Q9C075 422 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 CNNM2Q9H8M5 875 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 TSPOAP1O95153 1857 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 GRM8O00222 908 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 IGHDP01880 384 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 ZCRB1Q8TBF4 217 aaKnown RBP10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 ZSCAN16Q9H4T2 348 aaPredicted RBP10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 IL15P40933 162 aaPredicted RBP10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 FERMT3Q86UX7 667 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 NGLY1Q96IV0 654 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 ZHX3Q9H4I2 956 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 C19orf44Q9H6X5 657 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 RAD50Q92878 1312 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 MCM5P33992 734 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 PDE1AP54750 535 aa10.59□□□□□ -0.71
SPTBN1-207ENST00000615901 GJB2P29033 226 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 AOX1Q06278 1338 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 SSBP05455 408 aaKnown RBP eCLIP10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 HOXB7P09629 217 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 DESP17661 470 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 EIF5P55010 431 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 ST5P78524 1137 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 CFAP100Q494V2 611 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 DDX46Q7L014 1031 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 RANBP6O60518 1105 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 BMP15O95972 392 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 SSFA2P28290 1259 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 CCDC66A2RUB6 948 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 IFIT3O14879 490 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 CAMK4Q16566 473 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 CALRP27797 417 aaKnown RBP10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 ARHGAP29Q52LW3 1261 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 FKBP15Q5T1M5 1219 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 SNX21Q969T3 373 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 DCAF5Q96JK2 942 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 EFCAB6Q5THR3 1501 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 IL2RBP14784 551 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 UBE2HP62256 183 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 XAGE3Q8WTP9 111 aa10.58□□□□□ -0.72
SPTBN1-207ENST00000615901 CRNKL1Q9BZJ0 848 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 ADAMTS2O95450 1211 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 TRIM21P19474 475 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 SDSP20132 328 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 PTPRTO14522 1441 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 GSDMDP57764 484 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 NBPF6Q5VWK0 638 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 KANK3Q6NY19 840 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 VPS36Q86VN1 386 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 NBPF5PQ86XG9 351 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 LINS1Q8NG48 757 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 NBPF4Q96M43 638 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 DNAI2Q9GZS0 605 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 TBX22Q9Y458 520 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 TMEM67Q5HYA8 995 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 NEK1Q96PY6 1258 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 PRDM15P57071 1507 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 SPHKAPQ2M3C7 1700 aa10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 ZNF444Q8N0Y2 327 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-207ENST00000615901 LDHAL6AQ6ZMR3 332 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 PDCL3Q9H2J4 239 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 PPP1R1BQ9UD71 204 aaPredicted RBP10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 POTEJP0CG39 1038 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 KLHL40Q2TBA0 621 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 CCDC148Q8NFR7 591 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 MEIS3Q99687 375 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 FAM114A1Q8IWE2 563 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 ESYT1Q9BSJ8 1104 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 KIAA1328Q86T90 577 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 RTL9Q8NET4 1388 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 CCDC96Q2M329 555 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 HLA-DOAP06340 250 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 LEKR1Q6ZMV7 388 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 MAGI2Q86UL8 1455 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 C8orf58Q8NAV2 365 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 ARAP3Q8WWN8 1544 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 GNAT2P19087 354 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 GPTP24298 496 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 MTHFSDQ2M296 383 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 IP6K1Q92551 441 aa10.56□□□□□ -0.72
SPTBN1-207ENST00000615901 FSIP1Q8NA03 581 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 ATP5J2-PTCD1G3V325 749 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 JAKMIP3Q5VZ66 844 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 UQCRHLA0A096LP55 91 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 UQCRHP07919 91 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 IARSP41252 1262 aaKnown RBP10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 SPA17Q15506 151 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 TAF4BQ92750 862 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 UVSSAQ2YD98 709 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 PPP4R3AQ6IN85 833 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 TMTC2Q8N394 836 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 LRRC27Q9C0I9 530 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 CLIP2Q9UDT6 1046 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 MBD5Q9P267 1494 aa10.55□□□□□ -0.72
SPTBN1-207ENST00000615901 KIF24Q5T7B8 1368 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms