RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 EHMT1Q9H9B1 1298 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 NCOA1Q15788 1441 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 ZSCAN22P10073 491 aaPredicted RBP15.32■□□□□ 0.04
NLRC3-204ENST00000615877 GIGYF2Q6Y7W6 1299 aaKnown RBP15.32■□□□□ 0.04
NLRC3-204ENST00000615877 PTPRCP08575 1304 aa15.32■□□□□ 0.04
NLRC3-204ENST00000615877 TMEM266Q2M3C6 531 aa15.31■□□□□ 0.04
NLRC3-204ENST00000615877 FOXO3O43524 673 aa15.31■□□□□ 0.04
NLRC3-204ENST00000615877 BICD1Q96G01 975 aa15.31■□□□□ 0.04
NLRC3-204ENST00000615877 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
NLRC3-204ENST00000615877 EXOC5O00471 708 aa15.31■□□□□ 0.04
NLRC3-204ENST00000615877 MTIF2P46199 727 aaKnown RBP15.31■□□□□ 0.04
NLRC3-204ENST00000615877 KCNH5Q8NCM2 988 aa15.31■□□□□ 0.04
NLRC3-204ENST00000615877 TMX3Q96JJ7 454 aa15.31■□□□□ 0.04
NLRC3-204ENST00000615877 C16orf71Q8IYS4 520 aaPredicted RBP15.31■□□□□ 0.04
NLRC3-204ENST00000615877 POGZQ7Z3K3 1410 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 IFIT3O14879 490 aaKnown RBP15.3■□□□□ 0.04
NLRC3-204ENST00000615877 TAF7Q15545 349 aaPredicted RBP15.3■□□□□ 0.04
NLRC3-204ENST00000615877 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 HSF2BPO75031 334 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 ANO6Q4KMQ2 910 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 TCERG1LQ5VWI1 586 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 IQCA1Q86XH1 822 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 DNAAF4Q8WXU2 420 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 JADE2Q9NQC1 790 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 SLC52A1Q9NWF4 448 aa15.3■□□□□ 0.04
NLRC3-204ENST00000615877 MRPS9P82933 396 aaKnown RBP15.29■□□□□ 0.04
NLRC3-204ENST00000615877 CNPY2Q9Y2B0 182 aa15.29■□□□□ 0.04
NLRC3-204ENST00000615877 ZKSCAN5Q9Y2L8 839 aa15.29■□□□□ 0.04
NLRC3-204ENST00000615877 NUCB1Q02818 461 aa15.29■□□□□ 0.04
NLRC3-204ENST00000615877 ATP5J2-PTCD1G3V325 749 aa15.29■□□□□ 0.04
NLRC3-204ENST00000615877 MNAT1P51948 309 aa15.29■□□□□ 0.04
NLRC3-204ENST00000615877 TAOK3Q9H2K8 898 aa15.29■□□□□ 0.04
NLRC3-204ENST00000615877 SPECC1LQ69YQ0 1117 aa15.29■□□□□ 0.04
NLRC3-204ENST00000615877 USP48Q86UV5 1035 aa15.29■□□□□ 0.04
NLRC3-204ENST00000615877 HOMER2Q9NSB8 354 aa15.29■□□□□ 0.04
NLRC3-204ENST00000615877 SKILP12757 684 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 RBM26Q5T8P6 1007 aaKnown RBP15.28■□□□□ 0.04
NLRC3-204ENST00000615877 SNRKQ9NRH2 765 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 SERPINA10Q9UK55 444 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 CCDC194A0A1B0GVG4 234 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 TMCO5BA8MYB1 307 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 GTF2A1P52655 376 aaPredicted RBP15.28■□□□□ 0.04
NLRC3-204ENST00000615877 PRC1O43663 620 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 IVLP07476 585 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 PLS1Q14651 629 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 DDX46Q7L014 1031 aaKnown RBP15.28■□□□□ 0.04
NLRC3-204ENST00000615877 SLF2Q8IX21 1173 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 CCDC186Q7Z3E2 898 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 RAB34Q9BZG1 259 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 ZSCAN16Q9H4T2 348 aaPredicted RBP15.28■□□□□ 0.04
NLRC3-204ENST00000615877 CCDC141Q6ZP82 1450 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 ST5P78524 1137 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 PRPF4BQ13523 1007 aaKnown RBP15.28■□□□□ 0.04
NLRC3-204ENST00000615877 CATIPQ7Z7H3 387 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 CABP5Q9NP86 173 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 CEBPAP49715 358 aaPredicted RBP15.28■□□□□ 0.04
NLRC3-204ENST00000615877 KANK3Q6NY19 840 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 CEP112Q8N8E3 955 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 EHBP1Q8NDI1 1231 aa15.28■□□□□ 0.04
NLRC3-204ENST00000615877 MYO1BO43795 1136 aa15.27■□□□□ 0.04
NLRC3-204ENST00000615877 NF2P35240 595 aa15.27■□□□□ 0.04
NLRC3-204ENST00000615877 FAM114A1Q8IWE2 563 aa15.27■□□□□ 0.04
NLRC3-204ENST00000615877 ECHDC1Q9NTX5 307 aa15.27■□□□□ 0.04
NLRC3-204ENST00000615877 TERF1P54274 439 aa15.27■□□□□ 0.04
NLRC3-204ENST00000615877 HAND2P61296 217 aa15.27■□□□□ 0.04
NLRC3-204ENST00000615877 CCDC102BQ68D86 513 aa15.27■□□□□ 0.04
NLRC3-204ENST00000615877 ARFGAP3Q9NP61 516 aa15.27■□□□□ 0.04
NLRC3-204ENST00000615877 USP16Q9Y5T5 823 aa15.27■□□□□ 0.04
NLRC3-204ENST00000615877 UBASH3AP57075 661 aa15.27■□□□□ 0.03
NLRC3-204ENST00000615877 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.03
NLRC3-204ENST00000615877 KIF20AO95235 890 aa15.27■□□□□ 0.03
NLRC3-204ENST00000615877 NEK1Q96PY6 1258 aa15.27■□□□□ 0.03
NLRC3-204ENST00000615877 CCDC94Q9BW85 323 aaPredicted RBP15.27■□□□□ 0.03
NLRC3-204ENST00000615877 NCAPD3P42695 1498 aa15.27■□□□□ 0.03
NLRC3-204ENST00000615877 PICALMQ13492 652 aa15.27■□□□□ 0.03
NLRC3-204ENST00000615877 HDAC1Q13547 482 aaPredicted RBP15.27■□□□□ 0.03
NLRC3-204ENST00000615877 TSHZ3Q63HK5 1081 aa15.27■□□□□ 0.03
NLRC3-204ENST00000615877 NME9Q86XW9 330 aa15.27■□□□□ 0.03
NLRC3-204ENST00000615877 GTPBP4Q9BZE4 634 aaKnown RBP15.27■□□□□ 0.03
NLRC3-204ENST00000615877 PABPN1LA6NDY0 278 aaKnown RBP15.26■□□□□ 0.03
NLRC3-204ENST00000615877 CKAP4Q07065 602 aaKnown RBP15.26■□□□□ 0.03
NLRC3-204ENST00000615877 HOOK3Q86VS8 718 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 FAM200AQ8TCP9 573 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 RSPH14Q9UHP6 348 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 DNAI1Q9UI46 699 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 STAMBPO95630 424 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 DPH6Q7L8W6 267 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 HMG20BQ9P0W2 317 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 A0A087WZG4 1122 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 TSPY2A6NKD2 308 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 CHRNA2Q15822 529 aa15.26■□□□□ 0.03
NLRC3-204ENST00000615877 GOLIM4O00461 696 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 KAT14Q9H8E8 782 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 ORC3Q9UBD5 711 aaPredicted RBP15.25■□□□□ 0.03
NLRC3-204ENST00000615877 CTAGE15A4D2H0 777 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 CTAGE8P0CG41 777 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 CTAGE6Q86UF2 777 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms