RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
COL4A1-205ENST00000615732 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.2
COL4A1-205ENST00000615732 WDR63Q8IWG1 891 aa13.83□□□□□ -0.2
COL4A1-205ENST00000615732 TAF1DQ9H5J8 278 aaPredicted RBP13.83□□□□□ -0.2
COL4A1-205ENST00000615732 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.2
COL4A1-205ENST00000615732 KDM3BQ7LBC6 1761 aa13.82□□□□□ -0.2
COL4A1-205ENST00000615732 IQCA1LA6NCM1 817 aa13.82□□□□□ -0.2
COL4A1-205ENST00000615732 NPR1P16066 1061 aa13.82□□□□□ -0.2
COL4A1-205ENST00000615732 FKBP4Q02790 459 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL4A1-205ENST00000615732 LDHDQ86WU2 507 aa13.82□□□□□ -0.2
COL4A1-205ENST00000615732 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
COL4A1-205ENST00000615732 ZNF277Q9NRM2 450 aaPredicted RBP13.82□□□□□ -0.2
COL4A1-205ENST00000615732 SNED1Q8TER0 1413 aa13.81□□□□□ -0.2
COL4A1-205ENST00000615732 KLRG2A4D1S0 409 aaPredicted RBP13.81□□□□□ -0.2
COL4A1-205ENST00000615732 FOXN1O15353 648 aa13.81□□□□□ -0.2
COL4A1-205ENST00000615732 TMPOP42166 694 aaKnown RBP13.81□□□□□ -0.2
COL4A1-205ENST00000615732 TTLL7Q6ZT98 887 aa13.81□□□□□ -0.2
COL4A1-205ENST00000615732 SLC51AQ86UW1 340 aa13.81□□□□□ -0.2
COL4A1-205ENST00000615732 NUTM1Q86Y26 1132 aa13.81□□□□□ -0.2
COL4A1-205ENST00000615732 MYL6BP14649 208 aa13.8□□□□□ -0.2
COL4A1-205ENST00000615732 GPTP24298 496 aa13.8□□□□□ -0.2
COL4A1-205ENST00000615732 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
COL4A1-205ENST00000615732 NFE2L2Q16236 605 aa13.8□□□□□ -0.2
COL4A1-205ENST00000615732 TPTE2Q6XPS3 522 aa13.8□□□□□ -0.2
COL4A1-205ENST00000615732 TRMT2AQ8IZ69 625 aaKnown RBP13.8□□□□□ -0.2
COL4A1-205ENST00000615732 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.8□□□□□ -0.2
COL4A1-205ENST00000615732 ZBTB3Q9H5J0 574 aa13.8□□□□□ -0.2
COL4A1-205ENST00000615732 MYH16Q9H6N6 1097 aa13.8□□□□□ -0.2
COL4A1-205ENST00000615732 ITGBL1O95965 494 aaPredicted RBP13.79□□□□□ -0.2
COL4A1-205ENST00000615732 EIF4A1P60842 406 aaKnown RBP13.79□□□□□ -0.2
COL4A1-205ENST00000615732 EAPPQ56P03 285 aaPredicted RBP13.79□□□□□ -0.2
COL4A1-205ENST00000615732 DLG5Q8TDM6 1919 aa13.79□□□□□ -0.2
COL4A1-205ENST00000615732 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
COL4A1-205ENST00000615732 COL4A5P29400 1685 aa13.79□□□□□ -0.2
COL4A1-205ENST00000615732 TMEM88BA6NKF7 163 aa13.78□□□□□ -0.2
COL4A1-205ENST00000615732 RGL2O15211 777 aa13.78□□□□□ -0.2
COL4A1-205ENST00000615732 VEGFBP49765 207 aa13.78□□□□□ -0.2
COL4A1-205ENST00000615732 RIPK4P57078 832 aa13.78□□□□□ -0.2
COL4A1-205ENST00000615732 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
COL4A1-205ENST00000615732 HACL1Q9UJ83 578 aa13.78□□□□□ -0.2
COL4A1-205ENST00000615732 MAP3K15Q6ZN16 1313 aa13.78□□□□□ -0.2
COL4A1-205ENST00000615732 LTBP1Q14766 1721 aa13.78□□□□□ -0.2
COL4A1-205ENST00000615732 EPHX2P34913 555 aa13.77□□□□□ -0.21
COL4A1-205ENST00000615732 IARSP41252 1262 aaKnown RBP13.77□□□□□ -0.21
COL4A1-205ENST00000615732 RTKN2Q8IZC4 609 aa13.77□□□□□ -0.21
COL4A1-205ENST00000615732 SPINK5Q9NQ38 1064 aaPredicted RBP13.77□□□□□ -0.21
COL4A1-205ENST00000615732 FZD9O00144 591 aa13.76□□□□□ -0.21
COL4A1-205ENST00000615732 LMOD3Q0VAK6 560 aa13.76□□□□□ -0.21
COL4A1-205ENST00000615732 SYNE4Q8N205 404 aa13.76□□□□□ -0.21
COL4A1-205ENST00000615732 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
COL4A1-205ENST00000615732 IL16Q14005 1332 aa13.75□□□□□ -0.21
COL4A1-205ENST00000615732 TCERG1O14776 1098 aaKnown RBP13.75□□□□□ -0.21
COL4A1-205ENST00000615732 ANXA1P04083 346 aa13.75□□□□□ -0.21
COL4A1-205ENST00000615732 CALD1Q05682 793 aaKnown RBP13.75□□□□□ -0.21
COL4A1-205ENST00000615732 CRY2Q49AN0 593 aa13.75□□□□□ -0.21
COL4A1-205ENST00000615732 MAP1SQ66K74 1059 aaPredicted RBP13.75□□□□□ -0.21
COL4A1-205ENST00000615732 C3orf67Q6ZVT6 689 aa13.75□□□□□ -0.21
COL4A1-205ENST00000615732 NYXQ9GZU5 481 aa13.75□□□□□ -0.21
COL4A1-205ENST00000615732 PRDM10Q9NQV6 1147 aa13.75□□□□□ -0.21
COL4A1-205ENST00000615732 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
COL4A1-205ENST00000615732 NUP98P52948 1817 aa13.75□□□□□ -0.21
COL4A1-205ENST00000615732 THSD7BQ9C0I4 1608 aa13.75□□□□□ -0.21
COL4A1-205ENST00000615732 ERVV-1B6SEH8 477 aa13.74□□□□□ -0.21
COL4A1-205ENST00000615732 NTSR2O95665 410 aa13.74□□□□□ -0.21
COL4A1-205ENST00000615732 ALDH1B1P30837 517 aa13.74□□□□□ -0.21
COL4A1-205ENST00000615732 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
COL4A1-205ENST00000615732 SUSD4Q5VX71 490 aa13.74□□□□□ -0.21
COL4A1-205ENST00000615732 GPC2Q8N158 579 aa13.74□□□□□ -0.21
COL4A1-205ENST00000615732 RPGRQ92834 1020 aaKnown RBP13.74□□□□□ -0.21
COL4A1-205ENST00000615732 AIDAQ96BJ3 306 aa13.74□□□□□ -0.21
COL4A1-205ENST00000615732 PSMD1Q99460 953 aa13.74□□□□□ -0.21
COL4A1-205ENST00000615732 TRIM35Q9UPQ4 493 aa13.74□□□□□ -0.21
COL4A1-205ENST00000615732 RIC1Q4ADV7 1423 aa13.73□□□□□ -0.21
COL4A1-205ENST00000615732 RASSF10A6NK89 507 aa13.73□□□□□ -0.21
COL4A1-205ENST00000615732 EIF2S2P20042 333 aaKnown RBP13.73□□□□□ -0.21
COL4A1-205ENST00000615732 CTCFP49711 727 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-205ENST00000615732 PNMA8AQ86V59 439 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-205ENST00000615732 CNTROBQ8N137 903 aa13.73□□□□□ -0.21
COL4A1-205ENST00000615732 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
COL4A1-205ENST00000615732 WBP1LQ9NX94 342 aa13.73□□□□□ -0.21
COL4A1-205ENST00000615732 IBTKQ9P2D0 1353 aaPredicted RBP13.72□□□□□ -0.21
COL4A1-205ENST00000615732 FANCIQ9NVI1 1328 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 PPEF1O14829 653 aaPredicted RBP13.71□□□□□ -0.21
COL4A1-205ENST00000615732 PLIN1O60240 522 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 LBX1P52954 281 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 DEFB115Q30KQ5 88 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 GIGYF2Q6Y7W6 1299 aaKnown RBP13.71□□□□□ -0.21
COL4A1-205ENST00000615732 LRP10Q7Z4F1 713 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 ZNF34Q8IZ26 560 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 JDP2Q8WYK2 163 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 ZNF428Q96B54 188 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 CCDC136Q96JN2 1154 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 GJA3Q9Y6H8 435 aa13.71□□□□□ -0.21
COL4A1-205ENST00000615732 ERBB4Q15303 1308 aa13.7□□□□□ -0.22
COL4A1-205ENST00000615732 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
COL4A1-205ENST00000615732 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
COL4A1-205ENST00000615732 HOXA10P31260 410 aaPredicted RBP13.7□□□□□ -0.22
COL4A1-205ENST00000615732 SCNN1DP51172 638 aa13.7□□□□□ -0.22
COL4A1-205ENST00000615732 FMR1Q06787 632 aaKnown RBP eCLIP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms