RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 IL1RAPL2Q9NP60 686 aa12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 MTMR6Q9Y217 621 aa12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 SMC2O95347 1197 aa12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 LRRCC1Q9C099 1032 aa12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 YY1AP1Q9H869 796 aa12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 SBNO2Q9Y2G9 1366 aa12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 CLGNO14967 610 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 EPC1Q9H2F5 836 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 NRXN1Q9ULB1 1477 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 PTPRCP08575 1304 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 FCHSD2O94868 740 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 DDX19AQ9NUU7 478 aaKnown RBP12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 TULP4Q9NRJ4 1543 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 ACEP12821 1306 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 A0A087WWV3 80 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 FAM83GA6ND36 823 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 H2AFXP16104 143 aaPredicted RBP12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 EP400NLQ6ZTU2 488 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 NYAP1Q6ZVC0 841 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 TDRD7Q8NHU6 1098 aaKnown RBP12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 SPG7Q9UQ90 795 aa12.15□□□□□ -0.46
TNFAIP3-208ENST00000615468 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 JAKMIP1Q96N16 626 aaKnown RBP12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 BRD2P25440 801 aaKnown RBP12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 F6X3S4 739 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 KCNA6P17658 529 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 CWC27Q6UX04 472 aaKnown RBP12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 SRLQ86TD4 932 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 NCAPGQ9BPX3 1015 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 CARD6Q9BX69 1037 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 FAM53CQ9NYF3 392 aa12.14□□□□□ -0.47
TNFAIP3-208ENST00000615468 LARGE1O95461 756 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 AMPHP49418 695 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 UNC5CLQ8IV45 518 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 QRICH2Q9H0J4 1663 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 NR1I2O75469 434 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 SFPQP23246 707 aaKnown RBP eCLIP12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 NLRP6P59044 892 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 GOLGA5Q8TBA6 731 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 ROBO2Q9HCK4 1378 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 MED14O60244 1454 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 FOSBP53539 338 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 SCAND2PQ9GZW5 306 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 ARFGAP3Q9NP61 516 aa12.13□□□□□ -0.47
TNFAIP3-208ENST00000615468 PRR36Q9H6K5 1346 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 EVCP57679 992 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 TTLL5Q6EMB2 1281 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 TMC6Q7Z403 805 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 FBXO18Q8NFZ0 1043 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 VPS18Q9P253 973 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 SNX14Q9Y5W7 946 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 MYOM1P52179 1685 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 STK3Q13188 491 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 MCM6Q14566 821 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 ALKQ9UM73 1620 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 PREX1Q8TCU6 1659 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 HSPA4P34932 840 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 CDC37L1Q7L3B6 337 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 ZSWIM4Q9H7M6 989 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 ADAM21Q9UKJ8 722 aa12.12□□□□□ -0.47
TNFAIP3-208ENST00000615468 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 CLSTN2Q9H4D0 955 aa12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 ORC3Q9UBD5 711 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 PPLO60437 1756 aa12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 CYP46A1Q9Y6A2 500 aa12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 MSH6P52701 1360 aa12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 ERCC4Q92889 916 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 NPHP3Q7Z494 1330 aa12.11□□□□□ -0.47
TNFAIP3-208ENST00000615468 PATL2C9JE40 543 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 AOPEPQ8N6M6 819 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 NFATC2IPQ8NCF5 419 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 H3BQV1 296 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 ACTN2P35609 894 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 GSDMDP57764 484 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 CCZ1BP86790 482 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 CCZ1P86791 482 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 ESCO1Q5FWF5 840 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 C11orf57Q6ZUT1 292 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 PPP1R13BQ96KQ4 1090 aa12.1□□□□□ -0.47
TNFAIP3-208ENST00000615468 TCEANC2Q96MN5 208 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms