RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 DNAAF4Q8WXU2 420 aa13.81□□□□□ -0.2
CDH5-208ENST00000614547 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
CDH5-208ENST00000614547 PTCH1Q13635 1447 aa13.81□□□□□ -0.2
CDH5-208ENST00000614547 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
CDH5-208ENST00000614547 ZC3H6P61129 1189 aaKnown RBP13.81□□□□□ -0.2
CDH5-208ENST00000614547 ERCC6LQ2NKX8 1250 aa13.81□□□□□ -0.2
CDH5-208ENST00000614547 SYNE3Q6ZMZ3 975 aa13.81□□□□□ -0.2
CDH5-208ENST00000614547 THEMISQ8N1K5 641 aaPredicted RBP13.81□□□□□ -0.2
CDH5-208ENST00000614547 LMOD1P29536 600 aaPredicted RBP13.8□□□□□ -0.2
CDH5-208ENST00000614547 CWF19L2Q2TBE0 894 aaKnown RBP13.8□□□□□ -0.2
CDH5-208ENST00000614547 ARHGAP29Q52LW3 1261 aa13.8□□□□□ -0.2
CDH5-208ENST00000614547 ZNF397Q8NF99 534 aaPredicted RBP13.8□□□□□ -0.2
CDH5-208ENST00000614547 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
CDH5-208ENST00000614547 CFAP45Q9UL16 551 aa13.8□□□□□ -0.2
CDH5-208ENST00000614547 RGS12O14924 1447 aa13.8□□□□□ -0.2
CDH5-208ENST00000614547 CFAP100Q494V2 611 aa13.8□□□□□ -0.2
CDH5-208ENST00000614547 LEO1Q8WVC0 666 aaPredicted RBP13.8□□□□□ -0.2
CDH5-208ENST00000614547 SHROOM2Q13796 1616 aa13.8□□□□□ -0.2
CDH5-208ENST00000614547 USP27XA6NNY8 438 aa13.8□□□□□ -0.2
CDH5-208ENST00000614547 MPRIPQ6WCQ1 1025 aa13.8□□□□□ -0.2
CDH5-208ENST00000614547 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
CDH5-208ENST00000614547 UNC13BO14795 1591 aa13.79□□□□□ -0.2
CDH5-208ENST00000614547 SLU7O95391 586 aaKnown RBP13.79□□□□□ -0.2
CDH5-208ENST00000614547 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
CDH5-208ENST00000614547 CCDC129Q6ZRS4 1044 aa13.79□□□□□ -0.2
CDH5-208ENST00000614547 HYPKQ9NX55 129 aa13.79□□□□□ -0.2
CDH5-208ENST00000614547 PROSER2Q86WR7 435 aaPredicted RBP13.79□□□□□ -0.2
CDH5-208ENST00000614547 ACEP12821 1306 aa13.79□□□□□ -0.2
CDH5-208ENST00000614547 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
CDH5-208ENST00000614547 PES1O00541 588 aaKnown RBP13.79□□□□□ -0.2
CDH5-208ENST00000614547 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
CDH5-208ENST00000614547 OTUD7BQ6GQQ9 843 aa13.79□□□□□ -0.2
CDH5-208ENST00000614547 PUS7Q96PZ0 661 aaKnown RBP13.79□□□□□ -0.2
CDH5-208ENST00000614547 METP08581 1390 aa13.79□□□□□ -0.2
CDH5-208ENST00000614547 PIP4K2AP48426 406 aaPredicted RBP13.78□□□□□ -0.2
CDH5-208ENST00000614547 CCDC144BQ3MJ40 725 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 CCDC144CPQ8IYA2 1237 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 ANO10Q9NW15 660 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 STX1AQ16623 288 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 WASHC4Q2M389 1173 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 VPS53Q5VIR6 699 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 LSG1Q9H089 658 aaKnown RBP13.78□□□□□ -0.2
CDH5-208ENST00000614547 MAP3K19Q56UN5 1328 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 A0A1B0GVL5 298 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 GPS2Q13227 327 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
CDH5-208ENST00000614547 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
CDH5-208ENST00000614547 OSBPL3Q9H4L5 887 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
CDH5-208ENST00000614547 LAMC1P11047 1609 aa13.77□□□□□ -0.2
CDH5-208ENST00000614547 NEXNQ0ZGT2 675 aa13.77□□□□□ -0.2
CDH5-208ENST00000614547 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.2
CDH5-208ENST00000614547 Q6ZUG5 572 aa13.77□□□□□ -0.2
CDH5-208ENST00000614547 EYA1Q99502 592 aa13.77□□□□□ -0.2
CDH5-208ENST00000614547 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.2
CDH5-208ENST00000614547 MAP3K2Q9Y2U5 619 aa13.77□□□□□ -0.2
CDH5-208ENST00000614547 TNRQ92752 1358 aa13.77□□□□□ -0.2
CDH5-208ENST00000614547 SPTLC3Q9NUV7 552 aa13.77□□□□□ -0.21
CDH5-208ENST00000614547 ABCA6Q8N139 1617 aa13.77□□□□□ -0.21
CDH5-208ENST00000614547 CCDC171Q6TFL3 1326 aa13.77□□□□□ -0.21
CDH5-208ENST00000614547 TAF3Q5VWG9 929 aa13.77□□□□□ -0.21
CDH5-208ENST00000614547 CALCOCO1Q9P1Z2 691 aa13.77□□□□□ -0.21
CDH5-208ENST00000614547 CFAP74Q9C0B2 1584 aa13.77□□□□□ -0.21
CDH5-208ENST00000614547 APPP05067 770 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 ZNF530Q6P9A1 599 aaPredicted RBP13.76□□□□□ -0.21
CDH5-208ENST00000614547 CERS3Q8IU89 383 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 CABLES1Q8TDN4 633 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 EVI5LQ96CN4 794 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 FAM135BQ49AJ0 1406 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 HAND2P61296 217 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 BMS1Q14692 1282 aaKnown RBP13.76□□□□□ -0.21
CDH5-208ENST00000614547 C11orf57Q6ZUT1 292 aaPredicted RBP13.76□□□□□ -0.21
CDH5-208ENST00000614547 NEK11Q8NG66 645 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 ZNF396Q96N95 335 aaPredicted RBP13.76□□□□□ -0.21
CDH5-208ENST00000614547 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
CDH5-208ENST00000614547 CLSTN2Q9H4D0 955 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 IQGAP1P46940 1657 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
CDH5-208ENST00000614547 TTC21BQ7Z4L5 1316 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 SLC27A2O14975 620 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 NEK1Q96PY6 1258 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 CEP152O94986 1710 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 ZFYVE9O95405 1425 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 LMAN1P49257 510 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 FBXO38Q6PIJ6 1188 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 PIK3R4Q99570 1358 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 RPAP1Q9BWH6 1393 aaPredicted RBP13.75□□□□□ -0.21
CDH5-208ENST00000614547 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 APOBRQ0VD83 1088 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 ANKLE2Q86XL3 938 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 CPLX3Q8WVH0 158 aa13.75□□□□□ -0.21
CDH5-208ENST00000614547 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
CDH5-208ENST00000614547 RIMBP3CA6NJZ7 1639 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 RIMBP3BA6NNM3 1639 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 RIMBP3Q9UFD9 1639 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 GOLGA8FQ08AF8 430 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 GOLGA8DPQ0D2H9 430 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 LRRC7Q96NW7 1537 aa13.74□□□□□ -0.21
CDH5-208ENST00000614547 MARCKSP29966 332 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms