RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 SUSD4Q5VX71 490 aa17.58■□□□□ 0.4
HMGB1P24-201ENST00000611897 NECTIN2Q92692 538 aa17.58■□□□□ 0.4
HMGB1P24-201ENST00000611897 PNNQ9H307 717 aaKnown RBP17.58■□□□□ 0.4
HMGB1P24-201ENST00000611897 CRY2Q49AN0 593 aa17.57■□□□□ 0.4
HMGB1P24-201ENST00000611897 COL4A5P29400 1685 aa17.56■□□□□ 0.4
HMGB1P24-201ENST00000611897 PPEF1O14829 653 aaPredicted RBP17.56■□□□□ 0.4
HMGB1P24-201ENST00000611897 EIF6P56537 245 aaKnown RBP17.56■□□□□ 0.4
HMGB1P24-201ENST00000611897 RIPK4P57078 832 aa17.56■□□□□ 0.4
HMGB1P24-201ENST00000611897 MAP1SQ66K74 1059 aaPredicted RBP17.56■□□□□ 0.4
HMGB1P24-201ENST00000611897 LARGE2Q8N3Y3 721 aa17.56■□□□□ 0.4
HMGB1P24-201ENST00000611897 CNTNAP1P78357 1384 aa17.55■□□□□ 0.4
HMGB1P24-201ENST00000611897 IBTKQ9P2D0 1353 aaPredicted RBP17.55■□□□□ 0.4
HMGB1P24-201ENST00000611897 PASKQ96RG2 1323 aa17.55■□□□□ 0.4
HMGB1P24-201ENST00000611897 NTSR2O95665 410 aa17.55■□□□□ 0.4
HMGB1P24-201ENST00000611897 GIGYF2Q6Y7W6 1299 aaKnown RBP17.55■□□□□ 0.4
HMGB1P24-201ENST00000611897 C3orf67Q6ZVT6 689 aa17.55■□□□□ 0.4
HMGB1P24-201ENST00000611897 RBM17Q96I25 401 aaKnown RBP17.55■□□□□ 0.4
HMGB1P24-201ENST00000611897 PSMD1Q99460 953 aa17.55■□□□□ 0.4
HMGB1P24-201ENST00000611897 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 FZD9O00144 591 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 LMOD1P29536 600 aaPredicted RBP17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 PROSER3Q2NL68 480 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 PPP1R42Q7Z4L9 355 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 ZNF34Q8IZ26 560 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 GPC2Q8N158 579 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 ZNF428Q96B54 188 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 RIC1Q4ADV7 1423 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
HMGB1P24-201ENST00000611897 ANKRD36CQ5JPF3 1778 aa17.53■□□□□ 0.4
HMGB1P24-201ENST00000611897 ADAMTSL1Q8N6G6 1762 aa17.53■□□□□ 0.4
HMGB1P24-201ENST00000611897 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
HMGB1P24-201ENST00000611897 CC2D2BQ6DHV5 1058 aa17.53■□□□□ 0.4
HMGB1P24-201ENST00000611897 PNMA8AQ86V59 439 aaPredicted RBP17.53■□□□□ 0.4
HMGB1P24-201ENST00000611897 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
HMGB1P24-201ENST00000611897 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
HMGB1P24-201ENST00000611897 PPIP5K2O43314 1243 aa17.52■□□□□ 0.4
HMGB1P24-201ENST00000611897 PARP10Q53GL7 1025 aa17.52■□□□□ 0.4
HMGB1P24-201ENST00000611897 NIM1KQ8IY84 436 aa17.52■□□□□ 0.4
HMGB1P24-201ENST00000611897 CNTROBQ8N137 903 aa17.52■□□□□ 0.4
HMGB1P24-201ENST00000611897 AIDAQ96BJ3 306 aa17.52■□□□□ 0.4
HMGB1P24-201ENST00000611897 UTP14AQ9BVJ6 771 aaKnown RBP17.52■□□□□ 0.4
HMGB1P24-201ENST00000611897 LAS1LQ9Y4W2 734 aaKnown RBP17.52■□□□□ 0.4
HMGB1P24-201ENST00000611897 LAMB2P55268 1798 aa17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 FOXN1O15353 648 aa17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 ITGBL1O95965 494 aaPredicted RBP17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 HOXA10P31260 410 aaPredicted RBP17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 VEGFBP49765 207 aa17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 LMOD3Q0VAK6 560 aa17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 LTBP1Q14766 1721 aa17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 PAXIP1Q6ZW49 1069 aaPredicted RBP17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 NLRP3Q96P20 1036 aa17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 ABT1Q9ULW3 272 aaKnown RBP17.51■□□□□ 0.39
HMGB1P24-201ENST00000611897 TMPOP42166 694 aaKnown RBP17.5■□□□□ 0.39
HMGB1P24-201ENST00000611897 AOC3Q16853 763 aa17.5■□□□□ 0.39
HMGB1P24-201ENST00000611897 XAGE3Q8WTP9 111 aa17.5■□□□□ 0.39
HMGB1P24-201ENST00000611897 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
HMGB1P24-201ENST00000611897 EPS15P42566 896 aa17.49■□□□□ 0.39
HMGB1P24-201ENST00000611897 GRM1Q13255 1194 aa17.49■□□□□ 0.39
HMGB1P24-201ENST00000611897 PDIA6Q15084 440 aa17.49■□□□□ 0.39
HMGB1P24-201ENST00000611897 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
HMGB1P24-201ENST00000611897 ABCC4O15439 1325 aa17.48■□□□□ 0.39
HMGB1P24-201ENST00000611897 SCNN1DP51172 638 aa17.48■□□□□ 0.39
HMGB1P24-201ENST00000611897 FMR1Q06787 632 aaKnown RBP eCLIP17.48■□□□□ 0.39
HMGB1P24-201ENST00000611897 RALBP1Q15311 655 aa17.48■□□□□ 0.39
HMGB1P24-201ENST00000611897 COPS6Q7L5N1 327 aa17.48■□□□□ 0.39
HMGB1P24-201ENST00000611897 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
HMGB1P24-201ENST00000611897 TAF1P21675 1872 aa17.48■□□□□ 0.39
HMGB1P24-201ENST00000611897 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
HMGB1P24-201ENST00000611897 DDX10Q13206 875 aaKnown RBP17.46■□□□□ 0.39
HMGB1P24-201ENST00000611897 WDR43Q15061 677 aaKnown RBP eCLIP17.46■□□□□ 0.39
HMGB1P24-201ENST00000611897 DEFB115Q30KQ5 88 aa17.46■□□□□ 0.39
HMGB1P24-201ENST00000611897 HSP90AB3PQ58FF7 597 aa17.46■□□□□ 0.39
HMGB1P24-201ENST00000611897 DPP8Q6V1X1 898 aaPredicted RBP17.46■□□□□ 0.39
HMGB1P24-201ENST00000611897 TRMT112Q9UI30 125 aaKnown RBP17.46■□□□□ 0.39
HMGB1P24-201ENST00000611897 ATP6V0A2Q9Y487 856 aa17.46■□□□□ 0.39
HMGB1P24-201ENST00000611897 NLRP10Q86W26 655 aa17.45■□□□□ 0.38
HMGB1P24-201ENST00000611897 DDX21Q9NR30 783 aaKnown RBP eCLIP17.45■□□□□ 0.38
HMGB1P24-201ENST00000611897 CHPF2Q9P2E5 772 aa17.45■□□□□ 0.38
HMGB1P24-201ENST00000611897 TRPM7Q96QT4 1865 aa17.45■□□□□ 0.38
HMGB1P24-201ENST00000611897 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
HMGB1P24-201ENST00000611897 TRAF5O00463 557 aa17.44■□□□□ 0.38
HMGB1P24-201ENST00000611897 CTCFP49711 727 aaPredicted RBP17.44■□□□□ 0.38
HMGB1P24-201ENST00000611897 HDGFL1Q5TGJ6 251 aa17.44■□□□□ 0.38
HMGB1P24-201ENST00000611897 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
HMGB1P24-201ENST00000611897 SUPT20HQ8NEM7 779 aa17.44■□□□□ 0.38
HMGB1P24-201ENST00000611897 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
HMGB1P24-201ENST00000611897 RASSF10A6NK89 507 aa17.43■□□□□ 0.38
HMGB1P24-201ENST00000611897 LBX1P52954 281 aa17.43■□□□□ 0.38
HMGB1P24-201ENST00000611897 MPNDQ8N594 471 aa17.43■□□□□ 0.38
HMGB1P24-201ENST00000611897 BABAM1Q9NWV8 329 aa17.43■□□□□ 0.38
HMGB1P24-201ENST00000611897 WDR33Q9C0J8 1336 aaKnown RBP17.43■□□□□ 0.38
HMGB1P24-201ENST00000611897 RAD17O75943 681 aa17.42■□□□□ 0.38
HMGB1P24-201ENST00000611897 GMPSP49915 693 aaPredicted RBP17.42■□□□□ 0.38
HMGB1P24-201ENST00000611897 TCIRG1Q13488 830 aa17.42■□□□□ 0.38
HMGB1P24-201ENST00000611897 RTL5Q5HYW3 569 aaPredicted RBP17.42■□□□□ 0.38
HMGB1P24-201ENST00000611897 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
HMGB1P24-201ENST00000611897 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms