RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 SNED1Q8TER0 1413 aa20.95■□□□□ 0.94
SGMS1-209ENST00000609445 AIMP1Q12904 312 aaKnown RBP20.94■□□□□ 0.94
SGMS1-209ENST00000609445 RTKN2Q8IZC4 609 aa20.94■□□□□ 0.94
SGMS1-209ENST00000609445 SYNE4Q8N205 404 aa20.94■□□□□ 0.94
SGMS1-209ENST00000609445 RPGRQ92834 1020 aaKnown RBP20.94■□□□□ 0.94
SGMS1-209ENST00000609445 POTEIP0CG38 1075 aa20.93■□□□□ 0.94
SGMS1-209ENST00000609445 POTEJP0CG39 1038 aa20.93■□□□□ 0.94
SGMS1-209ENST00000609445 HOXA10P31260 410 aaPredicted RBP20.93■□□□□ 0.94
SGMS1-209ENST00000609445 PARP10Q53GL7 1025 aa20.93■□□□□ 0.94
SGMS1-209ENST00000609445 COPS6Q7L5N1 327 aa20.93■□□□□ 0.94
SGMS1-209ENST00000609445 PPP1R42Q7Z4L9 355 aa20.93■□□□□ 0.94
SGMS1-209ENST00000609445 XAGE3Q8WTP9 111 aa20.93■□□□□ 0.94
SGMS1-209ENST00000609445 ZNF541Q9H0D2 1346 aa20.93■□□□□ 0.94
SGMS1-209ENST00000609445 KLRG1Q96E93 195 aa20.92■□□□□ 0.94
SGMS1-209ENST00000609445 TCERG1O14776 1098 aaKnown RBP20.91■□□□□ 0.94
SGMS1-209ENST00000609445 IARSP41252 1262 aaKnown RBP20.91■□□□□ 0.94
SGMS1-209ENST00000609445 SCN4AP35499 1836 aa20.9■□□□□ 0.94
SGMS1-209ENST00000609445 LAMB2P55268 1798 aa20.9■□□□□ 0.94
SGMS1-209ENST00000609445 RBM17Q96I25 401 aaKnown RBP20.9■□□□□ 0.94
SGMS1-209ENST00000609445 UTP14AQ9BVJ6 771 aaKnown RBP20.9■□□□□ 0.94
SGMS1-209ENST00000609445 DDX21Q9NR30 783 aaKnown RBP eCLIP20.9■□□□□ 0.94
SGMS1-209ENST00000609445 COL4A5P29400 1685 aa20.89■□□□□ 0.94
SGMS1-209ENST00000609445 CRAMP1Q96RY5 1269 aa20.89■□□□□ 0.93
SGMS1-209ENST00000609445 PSMD1Q99460 953 aa20.89■□□□□ 0.93
SGMS1-209ENST00000609445 CHPF2Q9P2E5 772 aa20.89■□□□□ 0.93
SGMS1-209ENST00000609445 NLRP10Q86W26 655 aa20.88■□□□□ 0.93
SGMS1-209ENST00000609445 ZNF428Q96B54 188 aa20.88■□□□□ 0.93
SGMS1-209ENST00000609445 L3MBTL3Q96JM7 780 aaPredicted RBP20.88■□□□□ 0.93
SGMS1-209ENST00000609445 NLRP3Q96P20 1036 aa20.88■□□□□ 0.93
SGMS1-209ENST00000609445 PPEF1O14829 653 aaPredicted RBP20.87■□□□□ 0.93
SGMS1-209ENST00000609445 SLC10A5Q5PT55 438 aa20.87■□□□□ 0.93
SGMS1-209ENST00000609445 HDGFL1Q5TGJ6 251 aa20.87■□□□□ 0.93
SGMS1-209ENST00000609445 CC2D2BQ6DHV5 1058 aa20.87■□□□□ 0.93
SGMS1-209ENST00000609445 CHADLQ6NUI6 762 aa20.87■□□□□ 0.93
SGMS1-209ENST00000609445 TAF1DQ9H5J8 278 aaPredicted RBP20.87■□□□□ 0.93
SGMS1-209ENST00000609445 FZD9O00144 591 aa20.86■□□□□ 0.93
SGMS1-209ENST00000609445 HCLS1P14317 486 aaPredicted RBP20.86■□□□□ 0.93
SGMS1-209ENST00000609445 TCIRG1Q13488 830 aa20.86■□□□□ 0.93
SGMS1-209ENST00000609445 HSP90AB3PQ58FF7 597 aa20.86■□□□□ 0.93
SGMS1-209ENST00000609445 CFAP44Q96MT7 982 aa20.86■□□□□ 0.93
SGMS1-209ENST00000609445 IQCA1LA6NCM1 817 aa20.85■□□□□ 0.93
SGMS1-209ENST00000609445 APAF1O14727 1248 aa20.85■□□□□ 0.93
SGMS1-209ENST00000609445 JMYQ8N9B5 988 aa20.85■□□□□ 0.93
SGMS1-209ENST00000609445 MBIPQ9NS73 344 aa20.85■□□□□ 0.93
SGMS1-209ENST00000609445 TAF1P21675 1872 aa20.85■□□□□ 0.93
SGMS1-209ENST00000609445 ABCC4O15439 1325 aa20.84■□□□□ 0.93
SGMS1-209ENST00000609445 IFFO2Q5TF58 517 aa20.84■□□□□ 0.93
SGMS1-209ENST00000609445 DUSP27Q5VZP5 1158 aa20.84■□□□□ 0.93
SGMS1-209ENST00000609445 JDP2Q8WYK2 163 aa20.84■□□□□ 0.93
SGMS1-209ENST00000609445 TRMT112Q9UI30 125 aaKnown RBP20.84■□□□□ 0.93
SGMS1-209ENST00000609445 RNF123Q5XPI4 1314 aa20.83■□□□□ 0.93
SGMS1-209ENST00000609445 HOXB7P09629 217 aa20.83■□□□□ 0.93
SGMS1-209ENST00000609445 HACL1Q9UJ83 578 aa20.83■□□□□ 0.93
SGMS1-209ENST00000609445 ZNF853P0CG23 659 aa20.82■□□□□ 0.92
SGMS1-209ENST00000609445 EAPPQ56P03 285 aaPredicted RBP20.82■□□□□ 0.92
SGMS1-209ENST00000609445 LDHDQ86WU2 507 aa20.82■□□□□ 0.92
SGMS1-209ENST00000609445 LARGE2Q8N3Y3 721 aa20.82■□□□□ 0.92
SGMS1-209ENST00000609445 DDX60Q8IY21 1712 aaKnown RBP20.81■□□□□ 0.92
SGMS1-209ENST00000609445 PLBD2Q8NHP8 589 aa20.81■□□□□ 0.92
SGMS1-209ENST00000609445 DBF4Q9UBU7 674 aaPredicted RBP20.81■□□□□ 0.92
SGMS1-209ENST00000609445 ATP6V0A2Q9Y487 856 aa20.81■□□□□ 0.92
SGMS1-209ENST00000609445 GJA3Q9Y6H8 435 aa20.81■□□□□ 0.92
SGMS1-209ENST00000609445 ADAMTSL1Q8N6G6 1762 aa20.81■□□□□ 0.92
SGMS1-209ENST00000609445 SH3TC1Q8TE82 1336 aa20.8■□□□□ 0.92
SGMS1-209ENST00000609445 EPHX2P34913 555 aa20.8■□□□□ 0.92
SGMS1-209ENST00000609445 EIF6P56537 245 aaKnown RBP20.8■□□□□ 0.92
SGMS1-209ENST00000609445 GRIPAP1Q4V328 841 aa20.8■□□□□ 0.92
SGMS1-209ENST00000609445 CCDC184Q52MB2 194 aa20.8■□□□□ 0.92
SGMS1-209ENST00000609445 ANKRD13DQ6ZTN6 518 aa20.8■□□□□ 0.92
SGMS1-209ENST00000609445 GPC2Q8N158 579 aa20.8■□□□□ 0.92
SGMS1-209ENST00000609445 PCNTO95613 3336 aa20.8■□□□□ 0.92
SGMS1-209ENST00000609445 LTBP1Q14766 1721 aa20.79■□□□□ 0.92
SGMS1-209ENST00000609445 ATP5J2-PTCD1G3V325 749 aa20.79■□□□□ 0.92
SGMS1-209ENST00000609445 ELL2O00472 640 aaPredicted RBP20.79■□□□□ 0.92
SGMS1-209ENST00000609445 IFT57Q9NWB7 429 aa20.79■□□□□ 0.92
SGMS1-209ENST00000609445 CLEC11AQ9Y240 323 aa20.79■□□□□ 0.92
SGMS1-209ENST00000609445 PPIP5K2O43314 1243 aa20.78■□□□□ 0.92
SGMS1-209ENST00000609445 AOC3Q16853 763 aa20.78■□□□□ 0.92
SGMS1-209ENST00000609445 DDX46Q7L014 1031 aaKnown RBP20.78■□□□□ 0.92
SGMS1-209ENST00000609445 ISCA1Q9BUE6 129 aa20.78■□□□□ 0.92
SGMS1-209ENST00000609445 HYPKQ9NX55 129 aa20.78■□□□□ 0.92
SGMS1-209ENST00000609445 PASKQ96RG2 1323 aa20.78■□□□□ 0.92
SGMS1-209ENST00000609445 GNAI1P63096 354 aa20.77■□□□□ 0.92
SGMS1-209ENST00000609445 NIM1KQ8IY84 436 aa20.77■□□□□ 0.92
SGMS1-209ENST00000609445 FAM89AQ96GI7 184 aa20.77■□□□□ 0.92
SGMS1-209ENST00000609445 TMX4Q9H1E5 349 aaPredicted RBP20.77■□□□□ 0.92
SGMS1-209ENST00000609445 CREBZFQ9NS37 354 aa20.77■□□□□ 0.92
SGMS1-209ENST00000609445 BBOX1O75936 387 aa20.76■□□□□ 0.91
SGMS1-209ENST00000609445 ITGBL1O95965 494 aaPredicted RBP20.76■□□□□ 0.91
SGMS1-209ENST00000609445 GRAPQ13588 217 aa20.76■□□□□ 0.91
SGMS1-209ENST00000609445 RTL5Q5HYW3 569 aaPredicted RBP20.76■□□□□ 0.91
SGMS1-209ENST00000609445 SP8Q8IXZ3 490 aa20.76■□□□□ 0.91
SGMS1-209ENST00000609445 GRAPLQ8TC17 118 aaPredicted RBP20.76■□□□□ 0.91
SGMS1-209ENST00000609445 PHAXQ9H814 394 aaKnown RBP20.76■□□□□ 0.91
SGMS1-209ENST00000609445 MKRN1Q9UHC7 482 aaKnown RBP20.76■□□□□ 0.91
SGMS1-209ENST00000609445 COL4A1P02462 1669 aa20.75■□□□□ 0.91
SGMS1-209ENST00000609445 CALD1Q05682 793 aaKnown RBP20.75■□□□□ 0.91
SGMS1-209ENST00000609445 DPP8Q6V1X1 898 aaPredicted RBP20.75■□□□□ 0.91
SGMS1-209ENST00000609445 MPNDQ8N594 471 aa20.75■□□□□ 0.91
SGMS1-209ENST00000609445 C8orf58Q8NAV2 365 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms