RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 FAM155AB1AL88 458 aaPredicted RBP11.36□□□□□ -0.59
LINC01396-201ENST00000609099 EIF5P55010 431 aaKnown RBP11.36□□□□□ -0.59
LINC01396-201ENST00000609099 FKBP4Q02790 459 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC01396-201ENST00000609099 STYK1Q6J9G0 422 aa11.36□□□□□ -0.59
LINC01396-201ENST00000609099 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
LINC01396-201ENST00000609099 GPC2Q8N158 579 aa11.36□□□□□ -0.59
LINC01396-201ENST00000609099 ST20-MTHFSA0A0A6YYL1 179 aa11.35□□□□□ -0.59
LINC01396-201ENST00000609099 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
LINC01396-201ENST00000609099 CELF2O95319 508 aaKnown RBP11.35□□□□□ -0.59
LINC01396-201ENST00000609099 HSP90AB1P08238 724 aaKnown RBP11.34□□□□□ -0.59
LINC01396-201ENST00000609099 CLCN6P51797 869 aa11.34□□□□□ -0.59
LINC01396-201ENST00000609099 USP50Q70EL3 339 aaPredicted RBP11.34□□□□□ -0.59
LINC01396-201ENST00000609099 GLIS2Q9BZE0 524 aaPredicted RBP11.34□□□□□ -0.59
LINC01396-201ENST00000609099 LGR6Q9HBX8 967 aa11.34□□□□□ -0.59
LINC01396-201ENST00000609099 NPHP1O15259 732 aa11.33□□□□□ -0.6
LINC01396-201ENST00000609099 CCDC93Q567U6 631 aa11.33□□□□□ -0.6
LINC01396-201ENST00000609099 JDP2Q8WYK2 163 aa11.33□□□□□ -0.6
LINC01396-201ENST00000609099 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
LINC01396-201ENST00000609099 PITPNM2Q9BZ72 1349 aa11.33□□□□□ -0.6
LINC01396-201ENST00000609099 SHTN1A0MZ66 631 aa11.32□□□□□ -0.6
LINC01396-201ENST00000609099 KLRG2A4D1S0 409 aaPredicted RBP11.32□□□□□ -0.6
LINC01396-201ENST00000609099 TRPA1O75762 1119 aa11.32□□□□□ -0.6
LINC01396-201ENST00000609099 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
LINC01396-201ENST00000609099 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
LINC01396-201ENST00000609099 HIRAP54198 1017 aaPredicted RBP11.32□□□□□ -0.6
LINC01396-201ENST00000609099 EIF6P56537 245 aaKnown RBP11.32□□□□□ -0.6
LINC01396-201ENST00000609099 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
LINC01396-201ENST00000609099 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
LINC01396-201ENST00000609099 KIAA0100Q14667 2235 aaKnown RBP11.31□□□□□ -0.6
LINC01396-201ENST00000609099 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
LINC01396-201ENST00000609099 MTHFSP49914 203 aa11.31□□□□□ -0.6
LINC01396-201ENST00000609099 RTKN2Q8IZC4 609 aa11.31□□□□□ -0.6
LINC01396-201ENST00000609099 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
LINC01396-201ENST00000609099 MASTLQ96GX5 879 aa11.31□□□□□ -0.6
LINC01396-201ENST00000609099 RNF186Q9NXI6 227 aa11.31□□□□□ -0.6
LINC01396-201ENST00000609099 TBC1D2BQ9UPU7 963 aa11.31□□□□□ -0.6
LINC01396-201ENST00000609099 EYSQ5T1H1 3165 aa11.31□□□□□ -0.6
LINC01396-201ENST00000609099 AKAP11Q9UKA4 1901 aa11.31□□□□□ -0.6
LINC01396-201ENST00000609099 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
LINC01396-201ENST00000609099 ZNF408Q9H9D4 720 aa11.3□□□□□ -0.6
LINC01396-201ENST00000609099 SLC52A2Q9HAB3 445 aa11.3□□□□□ -0.6
LINC01396-201ENST00000609099 PAPPA2Q9BXP8 1791 aa11.3□□□□□ -0.6
LINC01396-201ENST00000609099 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
LINC01396-201ENST00000609099 MNX1P50219 401 aaPredicted RBP11.29□□□□□ -0.6
LINC01396-201ENST00000609099 TRPM4Q8TD43 1214 aa11.29□□□□□ -0.6
LINC01396-201ENST00000609099 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
LINC01396-201ENST00000609099 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
LINC01396-201ENST00000609099 HUNKP57058 714 aa11.28□□□□□ -0.6
LINC01396-201ENST00000609099 NEUROD1Q13562 356 aa11.28□□□□□ -0.6
LINC01396-201ENST00000609099 PLEKHO1Q53GL0 409 aaPredicted RBP11.28□□□□□ -0.6
LINC01396-201ENST00000609099 CNBD1Q8NA66 436 aa11.28□□□□□ -0.6
LINC01396-201ENST00000609099 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
LINC01396-201ENST00000609099 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
LINC01396-201ENST00000609099 ST5P78524 1137 aa11.27□□□□□ -0.61
LINC01396-201ENST00000609099 KIF23Q02241 960 aaPredicted RBP11.27□□□□□ -0.61
LINC01396-201ENST00000609099 MUC3AQ02505 3323 aa11.27□□□□□ -0.61
LINC01396-201ENST00000609099 A0A087WZG4 1122 aa11.26□□□□□ -0.61
LINC01396-201ENST00000609099 RGMBQ6NW40 437 aa11.26□□□□□ -0.61
LINC01396-201ENST00000609099 PSMD1Q99460 953 aa11.26□□□□□ -0.61
LINC01396-201ENST00000609099 GPRC5DQ9NZD1 345 aa11.26□□□□□ -0.61
LINC01396-201ENST00000609099 POTEFA5A3E0 1075 aa11.25□□□□□ -0.61
LINC01396-201ENST00000609099 RNMTO43148 476 aaKnown RBP11.25□□□□□ -0.61
LINC01396-201ENST00000609099 PIP4K2AP48426 406 aaPredicted RBP11.25□□□□□ -0.61
LINC01396-201ENST00000609099 FBXO46Q6PJ61 603 aaPredicted RBP11.25□□□□□ -0.61
LINC01396-201ENST00000609099 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
LINC01396-201ENST00000609099 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
LINC01396-201ENST00000609099 CSRNP1Q96S65 589 aa11.25□□□□□ -0.61
LINC01396-201ENST00000609099 ADARB2Q9NS39 739 aaKnown RBP11.25□□□□□ -0.61
LINC01396-201ENST00000609099 LAMA2P24043 3122 aaKnown RBP11.24□□□□□ -0.61
LINC01396-201ENST00000609099 EGFRP00533 1210 aa11.24□□□□□ -0.61
LINC01396-201ENST00000609099 NPR1P16066 1061 aa11.24□□□□□ -0.61
LINC01396-201ENST00000609099 INTS3Q68E01 1043 aaKnown RBP11.24□□□□□ -0.61
LINC01396-201ENST00000609099 ZNF496Q96IT1 587 aaPredicted RBP11.24□□□□□ -0.61
LINC01396-201ENST00000609099 A1BGP04217 495 aa11.23□□□□□ -0.61
LINC01396-201ENST00000609099 TNNT2P45379 298 aaPredicted RBP11.23□□□□□ -0.61
LINC01396-201ENST00000609099 ZNF157P51786 506 aaPredicted RBP11.23□□□□□ -0.61
LINC01396-201ENST00000609099 AMOTQ4VCS5 1084 aa11.23□□□□□ -0.61
LINC01396-201ENST00000609099 VSIG10Q8N0Z9 540 aa11.23□□□□□ -0.61
LINC01396-201ENST00000609099 C2orf69Q8N8R5 385 aa11.23□□□□□ -0.61
LINC01396-201ENST00000609099 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
LINC01396-201ENST00000609099 ZC3H15Q8WU90 426 aaKnown RBP11.23□□□□□ -0.61
LINC01396-201ENST00000609099 SETDB2Q96T68 719 aa11.23□□□□□ -0.61
LINC01396-201ENST00000609099 PRUNE2Q8WUY3 3088 aa11.23□□□□□ -0.61
LINC01396-201ENST00000609099 DUOX1Q9NRD9 1551 aa11.23□□□□□ -0.61
LINC01396-201ENST00000609099 GMPSP49915 693 aaPredicted RBP11.22□□□□□ -0.61
LINC01396-201ENST00000609099 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
LINC01396-201ENST00000609099 KDM3BQ7LBC6 1761 aa11.22□□□□□ -0.61
LINC01396-201ENST00000609099 R3HDMLQ9H3Y0 253 aa11.22□□□□□ -0.61
LINC01396-201ENST00000609099 NPC1L1Q9UHC9 1359 aa11.22□□□□□ -0.61
LINC01396-201ENST00000609099 RIC1Q4ADV7 1423 aa11.21□□□□□ -0.61
LINC01396-201ENST00000609099 HEG1Q9ULI3 1381 aa11.21□□□□□ -0.61
LINC01396-201ENST00000609099 PRAMEF22A3QJZ6 481 aa11.21□□□□□ -0.61
LINC01396-201ENST00000609099 CXCL9Q07325 125 aa11.21□□□□□ -0.61
LINC01396-201ENST00000609099 CRY2Q49AN0 593 aa11.21□□□□□ -0.61
LINC01396-201ENST00000609099 C1orf141Q5JVX7 400 aa11.21□□□□□ -0.61
LINC01396-201ENST00000609099 NPM2Q86SE8 214 aaKnown RBP11.21□□□□□ -0.61
LINC01396-201ENST00000609099 ZNF296Q8WUU4 475 aaPredicted RBP11.21□□□□□ -0.61
LINC01396-201ENST00000609099 COL4A1P02462 1669 aa11.2□□□□□ -0.62
LINC01396-201ENST00000609099 KCNQ3O43525 872 aa11.2□□□□□ -0.62
LINC01396-201ENST00000609099 SLC10A3P09131 477 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms