RNA–Protein interactions for RNA: ENST00000608535.1

SMIM8-208, Transcript of small integral membrane protein 8, human

Gene SMIM8, Length 3,915 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM8-208	ENST00000608535	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.17	□□□□□ -0.62
SMIM8-208	ENST00000608535	TMEM87B	Q96K49	555 aa		11.17	□□□□□ -0.62
SMIM8-208	ENST00000608535	SOGA1	O94964	1423 aa		11.17	□□□□□ -0.62
SMIM8-208	ENST00000608535	B4GALNT3	Q6L9W6	998 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	MNS1	Q8NEH6	495 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	GOLGA1	Q92805	767 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	UIMC1	Q96RL1	719 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	SUN2	Q9UH99	717 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	OAT	P04181	439 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	SKIL	P12757	684 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	NOL10	Q9BSC4	688 aa	Known RBP	11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	TSPYL1	Q9H0U9	437 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	CATIP	Q7Z7H3	387 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	OSCAR	Q8IYS5	282 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	MTMR14	Q8NCE2	650 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	TPPP	O94811	219 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	FECH	P22830	423 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	IRX5	P78411	483 aa	Predicted RBP	11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	SH3D19	Q5HYK7	790 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	AGAP9	Q5VTM2	703 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	ZNF713	Q8N859	430 aa	Predicted RBP	11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	MRFAP1L1	Q96HT8	127 aa		11.16	□□□□□ -0.62
SMIM8-208	ENST00000608535	TSPY4	P0CV99	314 aa		11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	TSPY10	P0CW01	314 aa		11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	C7	P10643	843 aa		11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	JAKMIP3	Q5VZ66	844 aa		11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	KLHL23	Q8NBE8	558 aa		11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	RPGR	Q92834	1020 aa	Known RBP	11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	NCAPG	Q9BPX3	1015 aa		11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535		H0Y3Z8	333 aa		11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	PAWR	Q96IZ0	340 aa	Known RBP	11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	GTPBP4	Q9BZE4	634 aa	Known RBP	11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	COMMD8	Q9NX08	183 aa		11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	ZNF232	Q9UNY5	417 aa		11.15	□□□□□ -0.62
SMIM8-208	ENST00000608535	RPN1	P04843	607 aa	Known RBP	11.15	□□□□□ -0.63
SMIM8-208	ENST00000608535	PRPH	P41219	470 aa		11.15	□□□□□ -0.63
SMIM8-208	ENST00000608535	PTPN14	Q15678	1187 aa		11.15	□□□□□ -0.63
SMIM8-208	ENST00000608535	CTR9	Q6PD62	1173 aa		11.15	□□□□□ -0.63
SMIM8-208	ENST00000608535	SVIP	Q8NHG7	77 aa		11.15	□□□□□ -0.63
SMIM8-208	ENST00000608535	FBXL5	Q9UKA1	691 aa		11.15	□□□□□ -0.63
SMIM8-208	ENST00000608535	RASA1	P20936	1047 aa		11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535	C8orf48	Q96LL4	319 aa		11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535	SOWAHD	A6NJG2	315 aa		11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535	DIAPH1	O60610	1272 aa	Known RBP	11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535	CHMP4BP1	P59074	171 aa		11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535	SMAD5	Q99717	465 aa	Known RBP	11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535	PCDHGB7	Q9Y5F8	929 aa		11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535	MYL1	P05976	194 aa		11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535	ESCO1	Q5FWF5	840 aa		11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535	E2F7	Q96AV8	911 aa		11.14	□□□□□ -0.63
SMIM8-208	ENST00000608535		A6NCN8	305 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	BOLA2-SMG1P6	H3BVE0	249 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	MAPK1	P28482	360 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	GNL2	Q13823	731 aa	Known RBP	11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	CCDC158	Q5M9N0	1113 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	TRIM52	Q96A61	297 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	CNGA1	P29973	690 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	AMHR2	Q16671	573 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	TMEM164	Q5U3C3	297 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	DNAJC25	Q9H1X3	360 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	FBXO2	Q9UK22	296 aa	Predicted RBP	11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	INO80D	Q53TQ3	878 aa	Predicted RBP	11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	FKBP15	Q5T1M5	1219 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	PGBD3	Q8N328	593 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	HOMER2	Q9NSB8	354 aa		11.13	□□□□□ -0.63
SMIM8-208	ENST00000608535	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	IFIT2	P09913	472 aa	Known RBP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	ARNT2	Q9HBZ2	717 aa		11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	SNX5	Q9Y5X3	404 aa		11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	HCLS1	P14317	486 aa	Predicted RBP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	N4BP2L2	Q92802	583 aa	Predicted RBP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	SYAP1	Q96A49	352 aa	Predicted RBP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	SLK	Q9H2G2	1235 aa	Predicted RBP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	EFCC1	Q9HA90	598 aa		11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	TMOD4	Q9NZQ9	345 aa		11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535		K7ELQ4	463 aa	Predicted RBP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	NBN	O60934	754 aa		11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	KIAA0754	O94854	1291 aa		11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	PIP4K2B	P78356	416 aa		11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	PDXDC1	Q6P996	788 aa		11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.12	□□□□□ -0.63
SMIM8-208	ENST00000608535	PDE3B	Q13370	1112 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	PHLDB3	Q6NSJ2	640 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	SMARCC1	Q92922	1105 aa	Predicted RBP	11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	UBAP1	Q9NZ09	502 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	TAGLN3	Q9UI15	199 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	AGR2	O95994	175 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	SESN3	P58005	492 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	GOLGA6L1	Q8N7Z2	621 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	C17orf50	Q8WW18	174 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	FAM81B	Q96LP2	452 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	PRKAB1	Q9Y478	270 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	TDRD9	Q8NDG6	1382 aa	Known RBP	11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	TRPC1	P48995	793 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	TEKT1	Q969V4	418 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	SCLT1	Q96NL6	688 aa		11.11	□□□□□ -0.63
SMIM8-208	ENST00000608535	SETD1B	Q9UPS6	1966 aa	Known RBP	11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms