RNA–Protein interactions for RNA: ENST00000608223.6

LINC00854-213, Long intergenic non-protein coding RNA 854, humanhuman

APPRIS ALT2 TSL 5

Gene LINC00854, Length 391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-213ENST00000608223 PPP1R42Q7Z4L9 355 aa18.58■□□□□ 0.56
LINC00854-213ENST00000608223 ADAMTS8Q9UP79 889 aa18.58■□□□□ 0.56
LINC00854-213ENST00000608223 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
LINC00854-213ENST00000608223 CHL1O00533 1208 aa18.57■□□□□ 0.56
LINC00854-213ENST00000608223 POTEIP0CG38 1075 aa18.57■□□□□ 0.56
LINC00854-213ENST00000608223 POTEJP0CG39 1038 aa18.57■□□□□ 0.56
LINC00854-213ENST00000608223 IARSP41252 1262 aaKnown RBP18.57■□□□□ 0.56
LINC00854-213ENST00000608223 COPS6Q7L5N1 327 aa18.57■□□□□ 0.56
LINC00854-213ENST00000608223 RBM17Q96I25 401 aaKnown RBP18.57■□□□□ 0.56
LINC00854-213ENST00000608223 PCNTO95613 3336 aa18.57■□□□□ 0.56
LINC00854-213ENST00000608223 RIC1Q4ADV7 1423 aa18.57■□□□□ 0.56
LINC00854-213ENST00000608223 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
LINC00854-213ENST00000608223 TCERG1O14776 1098 aaKnown RBP18.56■□□□□ 0.56
LINC00854-213ENST00000608223 HOXA10P31260 410 aaPredicted RBP18.56■□□□□ 0.56
LINC00854-213ENST00000608223 PARP10Q53GL7 1025 aa18.56■□□□□ 0.56
LINC00854-213ENST00000608223 CHADLQ6NUI6 762 aa18.56■□□□□ 0.56
LINC00854-213ENST00000608223 C3orf67Q6ZVT6 689 aa18.56■□□□□ 0.56
LINC00854-213ENST00000608223 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
LINC00854-213ENST00000608223 IQCA1LA6NCM1 817 aa18.55■□□□□ 0.56
LINC00854-213ENST00000608223 JMYQ8N9B5 988 aa18.55■□□□□ 0.56
LINC00854-213ENST00000608223 UTP14AQ9BVJ6 771 aaKnown RBP18.55■□□□□ 0.56
LINC00854-213ENST00000608223 CC2D2BQ6DHV5 1058 aa18.54■□□□□ 0.56
LINC00854-213ENST00000608223 SLC51AQ86UW1 340 aa18.54■□□□□ 0.56
LINC00854-213ENST00000608223 L3MBTL3Q96JM7 780 aaPredicted RBP18.54■□□□□ 0.56
LINC00854-213ENST00000608223 NLRP3Q96P20 1036 aa18.54■□□□□ 0.56
LINC00854-213ENST00000608223 CRAMP1Q96RY5 1269 aa18.54■□□□□ 0.56
LINC00854-213ENST00000608223 PSMD1Q99460 953 aa18.54■□□□□ 0.56
LINC00854-213ENST00000608223 PRKRIP1Q9H875 184 aaPredicted RBP18.54■□□□□ 0.56
LINC00854-213ENST00000608223 DDX21Q9NR30 783 aaKnown RBP eCLIP18.54■□□□□ 0.56
LINC00854-213ENST00000608223 LAMB2P55268 1798 aa18.54■□□□□ 0.56
LINC00854-213ENST00000608223 SNED1Q8TER0 1413 aa18.54■□□□□ 0.56
LINC00854-213ENST00000608223 PPEF1O14829 653 aaPredicted RBP18.53■□□□□ 0.56
LINC00854-213ENST00000608223 TAF1DQ9H5J8 278 aaPredicted RBP18.53■□□□□ 0.56
LINC00854-213ENST00000608223 FZD9O00144 591 aa18.52■□□□□ 0.56
LINC00854-213ENST00000608223 HSP90AB3PQ58FF7 597 aa18.52■□□□□ 0.56
LINC00854-213ENST00000608223 SLC10A5Q5PT55 438 aa18.52■□□□□ 0.56
LINC00854-213ENST00000608223 JDP2Q8WYK2 163 aa18.52■□□□□ 0.56
LINC00854-213ENST00000608223 CHPF2Q9P2E5 772 aa18.52■□□□□ 0.56
LINC00854-213ENST00000608223 TAF1P21675 1872 aa18.52■□□□□ 0.55
LINC00854-213ENST00000608223 TCIRG1Q13488 830 aa18.51■□□□□ 0.55
LINC00854-213ENST00000608223 EAPPQ56P03 285 aaPredicted RBP18.51■□□□□ 0.55
LINC00854-213ENST00000608223 HDGFL1Q5TGJ6 251 aa18.51■□□□□ 0.55
LINC00854-213ENST00000608223 NLRP10Q86W26 655 aa18.51■□□□□ 0.55
LINC00854-213ENST00000608223 LDHDQ86WU2 507 aa18.51■□□□□ 0.55
LINC00854-213ENST00000608223 ZNF428Q96B54 188 aa18.51■□□□□ 0.55
LINC00854-213ENST00000608223 HACL1Q9UJ83 578 aa18.51■□□□□ 0.55
LINC00854-213ENST00000608223 HCLS1P14317 486 aaPredicted RBP18.5■□□□□ 0.55
LINC00854-213ENST00000608223 GRIPAP1Q4V328 841 aa18.5■□□□□ 0.55
LINC00854-213ENST00000608223 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
LINC00854-213ENST00000608223 COL4A5P29400 1685 aa18.5■□□□□ 0.55
LINC00854-213ENST00000608223 RNF123Q5XPI4 1314 aa18.49■□□□□ 0.55
LINC00854-213ENST00000608223 EIF6P56537 245 aaKnown RBP18.49■□□□□ 0.55
LINC00854-213ENST00000608223 GPC2Q8N158 579 aa18.49■□□□□ 0.55
LINC00854-213ENST00000608223 LARGE2Q8N3Y3 721 aa18.49■□□□□ 0.55
LINC00854-213ENST00000608223 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
LINC00854-213ENST00000608223 TMX4Q9H1E5 349 aaPredicted RBP18.49■□□□□ 0.55
LINC00854-213ENST00000608223 CLEC11AQ9Y240 323 aa18.49■□□□□ 0.55
LINC00854-213ENST00000608223 GJA3Q9Y6H8 435 aa18.49■□□□□ 0.55
LINC00854-213ENST00000608223 ABCC4O15439 1325 aa18.49■□□□□ 0.55
LINC00854-213ENST00000608223 APAF1O14727 1248 aa18.48■□□□□ 0.55
LINC00854-213ENST00000608223 EPHX2P34913 555 aa18.48■□□□□ 0.55
LINC00854-213ENST00000608223 DUSP27Q5VZP5 1158 aa18.48■□□□□ 0.55
LINC00854-213ENST00000608223 ATP6V0A2Q9Y487 856 aa18.48■□□□□ 0.55
LINC00854-213ENST00000608223 HOXB7P09629 217 aa18.47■□□□□ 0.55
LINC00854-213ENST00000608223 CREBZFQ9NS37 354 aa18.47■□□□□ 0.55
LINC00854-213ENST00000608223 MBIPQ9NS73 344 aa18.47■□□□□ 0.55
LINC00854-213ENST00000608223 DBF4Q9UBU7 674 aaPredicted RBP18.47■□□□□ 0.55
LINC00854-213ENST00000608223 SH3TC1Q8TE82 1336 aa18.47■□□□□ 0.55
LINC00854-213ENST00000608223 ANKRD13DQ6ZTN6 518 aa18.46■□□□□ 0.55
LINC00854-213ENST00000608223 PLBD2Q8NHP8 589 aa18.46■□□□□ 0.55
LINC00854-213ENST00000608223 PASKQ96RG2 1323 aa18.46■□□□□ 0.55
LINC00854-213ENST00000608223 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
LINC00854-213ENST00000608223 PPIP5K2O43314 1243 aa18.45■□□□□ 0.54
LINC00854-213ENST00000608223 AOC3Q16853 763 aa18.45■□□□□ 0.54
LINC00854-213ENST00000608223 DDX46Q7L014 1031 aaKnown RBP18.45■□□□□ 0.54
LINC00854-213ENST00000608223 PNMA8AQ86V59 439 aaPredicted RBP18.45■□□□□ 0.54
LINC00854-213ENST00000608223 MKRN1Q9UHC7 482 aaKnown RBP18.45■□□□□ 0.54
LINC00854-213ENST00000608223 DDX60Q8IY21 1712 aaKnown RBP18.45■□□□□ 0.54
LINC00854-213ENST00000608223 LTBP1Q14766 1721 aa18.44■□□□□ 0.54
LINC00854-213ENST00000608223 ATP5J2-PTCD1G3V325 749 aa18.44■□□□□ 0.54
LINC00854-213ENST00000608223 BBOX1O75936 387 aa18.44■□□□□ 0.54
LINC00854-213ENST00000608223 ITGBL1O95965 494 aaPredicted RBP18.44■□□□□ 0.54
LINC00854-213ENST00000608223 NIM1KQ8IY84 436 aa18.44■□□□□ 0.54
LINC00854-213ENST00000608223 HYPKQ9NX55 129 aa18.44■□□□□ 0.54
LINC00854-213ENST00000608223 ELL2O00472 640 aaPredicted RBP18.43■□□□□ 0.54
LINC00854-213ENST00000608223 ZNF853P0CG23 659 aa18.43■□□□□ 0.54
LINC00854-213ENST00000608223 LMOD1P29536 600 aaPredicted RBP18.43■□□□□ 0.54
LINC00854-213ENST00000608223 MAP1SQ66K74 1059 aaPredicted RBP18.43■□□□□ 0.54
LINC00854-213ENST00000608223 SP8Q8IXZ3 490 aa18.43■□□□□ 0.54
LINC00854-213ENST00000608223 ISCA1Q9BUE6 129 aa18.43■□□□□ 0.54
LINC00854-213ENST00000608223 HSPA1AP0DMV8 641 aaKnown RBP18.42■□□□□ 0.54
LINC00854-213ENST00000608223 HSPA1BP0DMV9 641 aaKnown RBP18.42■□□□□ 0.54
LINC00854-213ENST00000608223 GNAI1P63096 354 aa18.42■□□□□ 0.54
LINC00854-213ENST00000608223 COL13A1Q5TAT6 717 aaPredicted RBP18.42■□□□□ 0.54
LINC00854-213ENST00000608223 DPP8Q6V1X1 898 aaPredicted RBP18.42■□□□□ 0.54
LINC00854-213ENST00000608223 CNTROBQ8N137 903 aa18.42■□□□□ 0.54
LINC00854-213ENST00000608223 MPNDQ8N594 471 aa18.42■□□□□ 0.54
LINC00854-213ENST00000608223 SUPT20HQ8NEM7 779 aa18.42■□□□□ 0.54
LINC00854-213ENST00000608223 FAM89AQ96GI7 184 aa18.42■□□□□ 0.54
LINC00854-213ENST00000608223 IFT57Q9NWB7 429 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms